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The map label for this gene is yocC [H]

Identifier: 52785959

GI number: 52785959

Start: 2170167

End: 2170676

Strand: Direct

Name: yocC [H]

Synonym: BLi02211

Alternate gene names: 52785959

Gene position: 2170167-2170676 (Clockwise)

Preceding gene: 52785952

Following gene: 52785964

Centisome position: 51.39

GC content: 45.29

Gene sequence:

>510_bases
ATGATAACGGATGAAGAACTGCAAAAAGACAGCTCCGGCTTGCAGAAGGAATTGAACGACCTGCAATTTCAACTGTTTCG
GATGCGTGAAAATATGAAGGATATCTCCAAAGATTCGCGAGTGCTCGGTATTGATCAATCGAAAGACGATGAATGGATGA
TTGTCCATTCGATTGATGATGGCCGGACATGCAAGATCATGTTAAGCGATTGCCAGTCGCCGTACCGCGGGAGGTGTGAT
TTTTCTCTCGTCGCTTCCTACACAGAAGAAAAACGCGCGATCCATATCGGGGATATTAAAGGACCGGCAGGCTTTGGATA
TGGTTCAATCTGTATGAAGTATTTAAAGGAAAAAGCCCGCGAGCATAACATCCCCGTCATCACCGGGGACATTGCTAAAA
GGGATTGGGACCATGTGGACCGGCTGATCCATTTTTACGAAAAGCATCATTTTGAAGTAACGATCGATCCTGATTCAAAA
TCCGGCGAAATTCAGTGGCAGGATCTTTAA

Upstream 100 bases:

>100_bases
AAAATTACATTAAAATTTAATTCTAGCAACCCATTTGCAAATTGCCGTTCTTTTTACTATAATCGAAAACTGTATGTTTA
AATGGAAAGGAGCAAGTTCT

Downstream 100 bases:

>100_bases
GGTGAAATAAAGGCAAATAACGCAAAGGACAAAACATTAAGGCAGAGGATGAACGCACATCCCCTGCCTTTTTTATTTGG
CAAGCCCCCAAGGCGAAAAT

Product: YocC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MITDEELQKDSSGLQKELNDLQFQLFRMRENMKDISKDSRVLGIDQSKDDEWMIVHSIDDGRTCKIMLSDCQSPYRGRCD
FSLVASYTEEKRAIHIGDIKGPAGFGYGSICMKYLKEKAREHNIPVITGDIAKRDWDHVDRLIHFYEKHHFEVTIDPDSK
SGEIQWQDL

Sequences:

>Translated_169_residues
MITDEELQKDSSGLQKELNDLQFQLFRMRENMKDISKDSRVLGIDQSKDDEWMIVHSIDDGRTCKIMLSDCQSPYRGRCD
FSLVASYTEEKRAIHIGDIKGPAGFGYGSICMKYLKEKAREHNIPVITGDIAKRDWDHVDRLIHFYEKHHFEVTIDPDSK
SGEIQWQDL
>Mature_169_residues
MITDEELQKDSSGLQKELNDLQFQLFRMRENMKDISKDSRVLGIDQSKDDEWMIVHSIDDGRTCKIMLSDCQSPYRGRCD
FSLVASYTEEKRAIHIGDIKGPAGFGYGSICMKYLKEKAREHNIPVITGDIAKRDWDHVDRLIHFYEKHHFEVTIDPDSK
SGEIQWQDL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016181 [H]

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19669; Mature: 19669

Theoretical pI: Translated: 5.32; Mature: 5.32

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MITDEELQKDSSGLQKELNDLQFQLFRMRENMKDISKDSRVLGIDQSKDDEWMIVHSIDD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCC
GRTCKIMLSDCQSPYRGRCDFSLVASYTEEKRAIHIGDIKGPAGFGYGSICMKYLKEKAR
CCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH
EHNIPVITGDIAKRDWDHVDRLIHFYEKHHFEVTIDPDSKSGEIQWQDL
HCCCCEEECCHHHCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEECC
>Mature Secondary Structure
MITDEELQKDSSGLQKELNDLQFQLFRMRENMKDISKDSRVLGIDQSKDDEWMIVHSIDD
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCEEEEEECCC
GRTCKIMLSDCQSPYRGRCDFSLVASYTEEKRAIHIGDIKGPAGFGYGSICMKYLKEKAR
CCEEEEEECCCCCCCCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCHHHHHHHHHHHHHH
EHNIPVITGDIAKRDWDHVDRLIHFYEKHHFEVTIDPDSKSGEIQWQDL
HCCCCEEECCHHHCCHHHHHHHHHHHHHCCEEEEECCCCCCCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]