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The map label for this gene is capD [H]

Identifier: 52785953

GI number: 52785953

Start: 2164599

End: 2165585

Strand: Reverse

Name: capD [H]

Synonym: BLi02205

Alternate gene names: 52785953

Gene position: 2165585-2164599 (Counterclockwise)

Preceding gene: 52785954

Following gene: 52785950

Centisome position: 51.29

GC content: 44.48

Gene sequence:

>987_bases
ATGTTTGAAAATAAAACGATATTCATTACTGGGGGAACAGGCTCATGGGGTCAGGAACTCATACTTCAGCTGCTAGCCTC
AAGCCCTAAAAAGATCATTGTATTTTCCAGAAATGAAGAAAGACAAGTTCAAATGAGAAGGCAGATTGAAGATCCGAGGC
TGACGTTTTTCATCGGGGATATTAGAGATCGGAAAGCGCTCAATACAGGATTAAAAGGTGTCGACTATGTCTTCCATTTA
GCAGCGCTGAAGCATGTCCCGGTTTGTGAAGAACAGCCGCTTGAAGCATTAAAAACAAATGTCACAGGGACCGAAAACGT
CATTGAAGCAGCGATCGAAAACGGCGTTAAAAAAGTCATCAACGTCTCGACTGACAAAGCGGCCGACCCTGCCAACTTCT
ACGGAATGACGAAAGCGATCGGCGAGAAGCTGATCGTATACGCGAACCATCTGTATTCAGACACGGGTTTTATTTGTGTA
AGGGGAGGAAATGTGCTTGGAAGCAGCGGAAGCGTTCTTCAGCTTTTTAAAGACCAGATCAGGGAAAAGAACCAAGTCGC
CATCACAGACAAAAGAATGACCCGTTTCTTCCTTACGAAGGAAAAAACGATTCAGCTTTTATTAAAAGCGGCTGAAAGCG
GCCAAGGCGGGGAAATTTTCATTATGAATTCGCCGGCCTGCAAAATTTTAGACATGGCTGAGGTGCTGATCGAAGCTTAT
GGAAACGAAATAACGTCCATCGCAGAAACGGGGGCAAGGCCGGGGGAAAAGCTTCATGAACTGCTGATTTCACCTCATGA
ACGGCAGCATGCTGTCTCATTTACAGATGACCTCGCGGTGGTGCTTCCTGCAATCAAAATGCCCGAGCTTCATAAAAAGT
ATGCGGATTGCCAGCCTTTAGAAACAGATAACTTGAGCTCAAAAGACTTTTTAATCTCAAAAGAGGAAGTAAAAGAAATG
CTGAAAAAAGGCGGTTTTTTGGATTAG

Upstream 100 bases:

>100_bases
AACGACCCGTATTGGAGAGAAATGTTCCAAGGCATAACAATTCGTTAGTTTTTCGCCGATGAGAATGATTGACTAAGGCA
CAAAGGGAGAGAAAAAGCGG

Downstream 100 bases:

>100_bases
ACGGATGGATCGAAGCGTTCACGGGGAATATGCGAACTGATGACAAGCATGGCATGCGTCTGCAGGCGATGCTTTCGTTC
GCTCCTCCAAAACAGGACAA

Product: hypothetical protein

Products: NA

Alternate protein names: Galactowaldenase; UDP-galactose 4-epimerase [H]

Number of amino acids: Translated: 328; Mature: 328

Protein sequence:

>328_residues
MFENKTIFITGGTGSWGQELILQLLASSPKKIIVFSRNEERQVQMRRQIEDPRLTFFIGDIRDRKALNTGLKGVDYVFHL
AALKHVPVCEEQPLEALKTNVTGTENVIEAAIENGVKKVINVSTDKAADPANFYGMTKAIGEKLIVYANHLYSDTGFICV
RGGNVLGSSGSVLQLFKDQIREKNQVAITDKRMTRFFLTKEKTIQLLLKAAESGQGGEIFIMNSPACKILDMAEVLIEAY
GNEITSIAETGARPGEKLHELLISPHERQHAVSFTDDLAVVLPAIKMPELHKKYADCQPLETDNLSSKDFLISKEEVKEM
LKKGGFLD

Sequences:

>Translated_328_residues
MFENKTIFITGGTGSWGQELILQLLASSPKKIIVFSRNEERQVQMRRQIEDPRLTFFIGDIRDRKALNTGLKGVDYVFHL
AALKHVPVCEEQPLEALKTNVTGTENVIEAAIENGVKKVINVSTDKAADPANFYGMTKAIGEKLIVYANHLYSDTGFICV
RGGNVLGSSGSVLQLFKDQIREKNQVAITDKRMTRFFLTKEKTIQLLLKAAESGQGGEIFIMNSPACKILDMAEVLIEAY
GNEITSIAETGARPGEKLHELLISPHERQHAVSFTDDLAVVLPAIKMPELHKKYADCQPLETDNLSSKDFLISKEEVKEM
LKKGGFLD
>Mature_328_residues
MFENKTIFITGGTGSWGQELILQLLASSPKKIIVFSRNEERQVQMRRQIEDPRLTFFIGDIRDRKALNTGLKGVDYVFHL
AALKHVPVCEEQPLEALKTNVTGTENVIEAAIENGVKKVINVSTDKAADPANFYGMTKAIGEKLIVYANHLYSDTGFICV
RGGNVLGSSGSVLQLFKDQIREKNQVAITDKRMTRFFLTKEKTIQLLLKAAESGQGGEIFIMNSPACKILDMAEVLIEAY
GNEITSIAETGARPGEKLHELLISPHERQHAVSFTDDLAVVLPAIKMPELHKKYADCQPLETDNLSSKDFLISKEEVKEM
LKKGGFLD

Specific function: Epimerizes UDP-galactose to UDP-glucose [H]

COG id: COG1086

COG function: function code MG; Predicted nucleoside-diphosphate sugar epimerases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR003869
- InterPro:   IPR013692 [H]

Pfam domain/function: PF08485 Polysacc_syn_2C; PF02719 Polysacc_synt_2 [H]

EC number: =5.1.3.2 [H]

Molecular weight: Translated: 36456; Mature: 36456

Theoretical pI: Translated: 6.64; Mature: 6.64

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFENKTIFITGGTGSWGQELILQLLASSPKKIIVFSRNEERQVQMRRQIEDPRLTFFIGD
CCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEECC
IRDRKALNTGLKGVDYVFHLAALKHVPVCEEQPLEALKTNVTGTENVIEAAIENGVKKVI
CHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
NVSTDKAADPANFYGMTKAIGEKLIVYANHLYSDTGFICVRGGNVLGSSGSVLQLFKDQI
CCCCCCCCCCHHHHHHHHHHHHHEEEEEHHHCCCCCEEEEECCCEECCCCCHHHHHHHHH
REKNQVAITDKRMTRFFLTKEKTIQLLLKAAESGQGGEIFIMNSPACKILDMAEVLIEAY
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
GNEITSIAETGARPGEKLHELLISPHERQHAVSFTDDLAVVLPAIKMPELHKKYADCQPL
CCHHHHHHHCCCCCHHHHHHHHCCCCCHHCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCC
ETDNLSSKDFLISKEEVKEMLKKGGFLD
CCCCCCCCCCEECHHHHHHHHHCCCCCC
>Mature Secondary Structure
MFENKTIFITGGTGSWGQELILQLLASSPKKIIVFSRNEERQVQMRRQIEDPRLTFFIGD
CCCCCEEEEECCCCCHHHHHHHHHHHCCCCEEEEEECCCHHHHHHHHHCCCCEEEEEECC
IRDRKALNTGLKGVDYVFHLAALKHVPVCEEQPLEALKTNVTGTENVIEAAIENGVKKVI
CHHHHHHHHCCCHHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHH
NVSTDKAADPANFYGMTKAIGEKLIVYANHLYSDTGFICVRGGNVLGSSGSVLQLFKDQI
CCCCCCCCCCHHHHHHHHHHHHHEEEEEHHHCCCCCEEEEECCCEECCCCCHHHHHHHHH
REKNQVAITDKRMTRFFLTKEKTIQLLLKAAESGQGGEIFIMNSPACKILDMAEVLIEAY
CCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHHHHHHH
GNEITSIAETGARPGEKLHELLISPHERQHAVSFTDDLAVVLPAIKMPELHKKYADCQPL
CCHHHHHHHCCCCCHHHHHHHHCCCCCHHCCCCCCCCHHHHHCCCCCCHHHHHHCCCCCC
ETDNLSSKDFLISKEEVKEMLKKGGFLD
CCCCCCCCCCEECHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA