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The map label for this gene is yobV [H]

Identifier: 52785947

GI number: 52785947

Start: 2158918

End: 2159853

Strand: Reverse

Name: yobV [H]

Synonym: BLi02199

Alternate gene names: 52785947

Gene position: 2159853-2158918 (Counterclockwise)

Preceding gene: 52785949

Following gene: 52785946

Centisome position: 51.15

GC content: 48.08

Gene sequence:

>936_bases
GTGAAAATTGACCGGCTTTTGGCCATTGTGATTTTATTGATTAATAAACGCCAAGTGCAGGCAAAGGAGCTTGCCGGCAT
GTTCGAAGTCTCTGTCAGAACGATTTATCGGGATATTGAGGCGATCAACCAGGCGGGCATTCCGATTGTCACCTCACAGG
GAGCAGGAGGCGGGATCAGCATCATGGAGCGGTTTCGGCTCGAAAATAAGCTGCTGTCAGCAGACGAACTGGCGGCCATT
ACGACGGCTTTGGAAAGCGTTTCCTCGACGTACGAAGTGCTCCATCACGGGTCTGCACTTGAAAAAATCCGGTTTCTCGT
TTCGGAAGAAGAAATGCCGGAATTCCGCAAGAAAACGGAAAAATGGTTTGTTGACATCTCTTCCTGGGGAGAAAGTCCTG
TCATCAAAGAAAAGATCCGCTTGCTGGATGAAGCGTCAGACAGCACGCGGGCGGTCTCCTTTAATTATGTGGACAGAGAG
GGGCAGACCGGAAAAAGGAAAGCGGAGCCGCATACCCTCGTCCTAAAGGGAAGGCACTGGTATTTGTATGCTTTCTGCCT
GAAGAGACAGGCGTTTCGCTTCTTTAAACTGTTGCGGATGAAAGACGTGCGGATGCTTGAAGAAAAGTTTGAAAGAAAGG
AAGTCGATCTGTCTTCACTTCCTTGGGAGACATCGTGGTACAAACCGGACAATATGACCGAGGTGACCCTTCTCATTAAG
CCGTCGGGAGAGTCTTTGGCAAGAGAATGGTTCGGCTCAGAAGCTCTCACTTATGAAAACGGACAATGCGTGGCAACCAT
TTCTTATCCGGAAGATCAATGGCTGTACGGATTTCTGCTCCAATTTGGAACCCATATCGAAGTTCTCGATCCTCCTCGCA
TCCGTCAAAAAATAAAAGACTTGGCAAAACAAATTGTACATTTATACGAAACCTGA

Upstream 100 bases:

>100_bases
AGATCCTCTTTTTTGTCATGATATCCCAGAATGGTGTGCGCTATGGAATGAAAATAGCAGAAAAAAAGAGGCTGCACAAG
ATGAATGTGAGGGATCTGCA

Downstream 100 bases:

>100_bases
CACGATGCTGTCAGGTTTCTTTTTGTATGATGAAGAAAAAGGAGGAATGAAACATGGAACATTATTTTTGCCAAAGCTGC
GGCATGCCGATGACAAGCGA

Product: YobV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MKIDRLLAIVILLINKRQVQAKELAGMFEVSVRTIYRDIEAINQAGIPIVTSQGAGGGISIMERFRLENKLLSADELAAI
TTALESVSSTYEVLHHGSALEKIRFLVSEEEMPEFRKKTEKWFVDISSWGESPVIKEKIRLLDEASDSTRAVSFNYVDRE
GQTGKRKAEPHTLVLKGRHWYLYAFCLKRQAFRFFKLLRMKDVRMLEEKFERKEVDLSSLPWETSWYKPDNMTEVTLLIK
PSGESLAREWFGSEALTYENGQCVATISYPEDQWLYGFLLQFGTHIEVLDPPRIRQKIKDLAKQIVHLYET

Sequences:

>Translated_311_residues
MKIDRLLAIVILLINKRQVQAKELAGMFEVSVRTIYRDIEAINQAGIPIVTSQGAGGGISIMERFRLENKLLSADELAAI
TTALESVSSTYEVLHHGSALEKIRFLVSEEEMPEFRKKTEKWFVDISSWGESPVIKEKIRLLDEASDSTRAVSFNYVDRE
GQTGKRKAEPHTLVLKGRHWYLYAFCLKRQAFRFFKLLRMKDVRMLEEKFERKEVDLSSLPWETSWYKPDNMTEVTLLIK
PSGESLAREWFGSEALTYENGQCVATISYPEDQWLYGFLLQFGTHIEVLDPPRIRQKIKDLAKQIVHLYET
>Mature_311_residues
MKIDRLLAIVILLINKRQVQAKELAGMFEVSVRTIYRDIEAINQAGIPIVTSQGAGGGISIMERFRLENKLLSADELAAI
TTALESVSSTYEVLHHGSALEKIRFLVSEEEMPEFRKKTEKWFVDISSWGESPVIKEKIRLLDEASDSTRAVSFNYVDRE
GQTGKRKAEPHTLVLKGRHWYLYAFCLKRQAFRFFKLLRMKDVRMLEEKFERKEVDLSSLPWETSWYKPDNMTEVTLLIK
PSGESLAREWFGSEALTYENGQCVATISYPEDQWLYGFLLQFGTHIEVLDPPRIRQKIKDLAKQIVHLYET

Specific function: Unknown

COG id: COG2378

COG function: function code K; Predicted transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH deoR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013196
- InterPro:   IPR001034
- InterPro:   IPR011991 [H]

Pfam domain/function: PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 35971; Mature: 35971

Theoretical pI: Translated: 7.15; Mature: 7.15

Prosite motif: PS51000 HTH_DEOR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKIDRLLAIVILLINKRQVQAKELAGMFEVSVRTIYRDIEAINQAGIPIVTSQGAGGGIS
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHH
IMERFRLENKLLSADELAAITTALESVSSTYEVLHHGSALEKIRFLVSEEEMPEFRKKTE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHCCHHHHHHHH
KWFVDISSWGESPVIKEKIRLLDEASDSTRAVSFNYVDREGQTGKRKAEPHTLVLKGRHW
HHEEEHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCH
YLYAFCLKRQAFRFFKLLRMKDVRMLEEKFERKEVDLSSLPWETSWYKPDNMTEVTLLIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCEEEEEEEE
PSGESLAREWFGSEALTYENGQCVATISYPEDQWLYGFLLQFGTHIEVLDPPRIRQKIKD
CCCHHHHHHHCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHH
LAKQIVHLYET
HHHHHHHHHCC
>Mature Secondary Structure
MKIDRLLAIVILLINKRQVQAKELAGMFEVSVRTIYRDIEAINQAGIPIVTSQGAGGGIS
CCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCCCCCCHH
IMERFRLENKLLSADELAAITTALESVSSTYEVLHHGSALEKIRFLVSEEEMPEFRKKTE
HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCHHCCHHHHHHHH
KWFVDISSWGESPVIKEKIRLLDEASDSTRAVSFNYVDREGQTGKRKAEPHTLVLKGRHW
HHEEEHHHCCCCCHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCCCCCCEEEEECCCH
YLYAFCLKRQAFRFFKLLRMKDVRMLEEKFERKEVDLSSLPWETSWYKPDNMTEVTLLIK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCCCCCCCCCEEEEEEEE
PSGESLAREWFGSEALTYENGQCVATISYPEDQWLYGFLLQFGTHIEVLDPPRIRQKIKD
CCCHHHHHHHCCCCCEEECCCCEEEEEECCCCHHHHHHHHHHCCCEEEECCHHHHHHHHH
LAKQIVHLYET
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]