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The map label for this gene is yjiA [H]

Identifier: 52785691

GI number: 52785691

Start: 1895321

End: 1896313

Strand: Reverse

Name: yjiA [H]

Synonym: BLi01933

Alternate gene names: 52785691

Gene position: 1896313-1895321 (Counterclockwise)

Preceding gene: 52785692

Following gene: 52785562

Centisome position: 44.91

GC content: 41.99

Gene sequence:

>993_bases
ATGATCATGCCTATAACTAAAAAGAAAATTCCTGTCGCTATTCTCACTGGGTACTTAGGCGCCGGGAAAACCACACTTTT
AAATCGAATACTTACAGAAAAGCACAATCAAAAGATCGCGGTTATTGTCAATGAGTACGGAGAAGTCGGGATAGACAACC
AGCTTGTCGTTGATTCTGAAGAAGAAATTTTGGAAATGAACAACGGCTGTATCTGTTGCACGGTCCGCGGAGATTTGATT
CGCATTCTGAGAACGCTTGTATTCTCAATGGATCAAGGGAAAGTTGCATTTGATCGCGTTTTAATCGAAACAACGGGACT
GGCTGATCCTGCCCCCGTTGCCCAGACGTTTTTCATGGATGAACTGCTATCCGAAATATTTGAAGTTGACAGCATCGTCA
CGGTAGTAGACAGCAAGCATGTCACCAGACATCTGGATGATCAGGATGAAGCGCAAGAGCAAATCGCATTTGCTGACGTC
ATCATCCTCAATAAAACAGATTTAGTATCGAATAACGAGCTGAAATCCTTGGAGCAAAGACTTGTCAACATTAATCCTAC
GGCTAAGAGGCTGTATGCCAGAGATTGCAAGGTCAATTTAAGAGATATACTGGGGATCAATACGTTCGACGTCAATCGAA
AAATTGAAATCGATCCTCATTTTCTAGAAGATCATCATCACCACCATCACGATGATAAAGTGTCTTCTATCGCTTTTCGG
GAAGAGAAGCCTCTTGATTTGGCAAAGGTGGATCATTGGATGAGTTATCTCGTACGGGAAAAAGGAGAAGATTTATTGCG
TTATAAAGGGATCCTTTATATTAAAGGCGAAGAATATCGAATCGTATTCCAAGGGCTTCATATGCTGTTTTCAGGACGTC
CGGACCGGAAGTGGAACGAAAACGAGAAAAAACAAAGCGAACTTGTTTTCATCGGAAAGGACTTGGACAAAGAGGAACTG
GAGCGGCAATTTAAAAATTGCATCGCAAAGTAA

Upstream 100 bases:

>100_bases
TTGTATGACGGCCAACGCTTCGAACGTTCATCCGGCGTCATCTCCGGAGTTCCAAAAGAAAAAGTAATCAAAGTATCGAA
AAAATTTTAAATGGAGTCGA

Downstream 100 bases:

>100_bases
CTCTTTCTCGCTTTGTTGGCTCTCTCTTTGCTTAACAGAAAGACCCGAGATTTGATTTTGCGAGTCTATTTCAAGGGCAA
AATCAGTTTTTAAGCAGGTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 330; Mature: 330

Protein sequence:

>330_residues
MIMPITKKKIPVAILTGYLGAGKTTLLNRILTEKHNQKIAVIVNEYGEVGIDNQLVVDSEEEILEMNNGCICCTVRGDLI
RILRTLVFSMDQGKVAFDRVLIETTGLADPAPVAQTFFMDELLSEIFEVDSIVTVVDSKHVTRHLDDQDEAQEQIAFADV
IILNKTDLVSNNELKSLEQRLVNINPTAKRLYARDCKVNLRDILGINTFDVNRKIEIDPHFLEDHHHHHHDDKVSSIAFR
EEKPLDLAKVDHWMSYLVREKGEDLLRYKGILYIKGEEYRIVFQGLHMLFSGRPDRKWNENEKKQSELVFIGKDLDKEEL
ERQFKNCIAK

Sequences:

>Translated_330_residues
MIMPITKKKIPVAILTGYLGAGKTTLLNRILTEKHNQKIAVIVNEYGEVGIDNQLVVDSEEEILEMNNGCICCTVRGDLI
RILRTLVFSMDQGKVAFDRVLIETTGLADPAPVAQTFFMDELLSEIFEVDSIVTVVDSKHVTRHLDDQDEAQEQIAFADV
IILNKTDLVSNNELKSLEQRLVNINPTAKRLYARDCKVNLRDILGINTFDVNRKIEIDPHFLEDHHHHHHDDKVSSIAFR
EEKPLDLAKVDHWMSYLVREKGEDLLRYKGILYIKGEEYRIVFQGLHMLFSGRPDRKWNENEKKQSELVFIGKDLDKEEL
ERQFKNCIAK
>Mature_330_residues
MIMPITKKKIPVAILTGYLGAGKTTLLNRILTEKHNQKIAVIVNEYGEVGIDNQLVVDSEEEILEMNNGCICCTVRGDLI
RILRTLVFSMDQGKVAFDRVLIETTGLADPAPVAQTFFMDELLSEIFEVDSIVTVVDSKHVTRHLDDQDEAQEQIAFADV
IILNKTDLVSNNELKSLEQRLVNINPTAKRLYARDCKVNLRDILGINTFDVNRKIEIDPHFLEDHHHHHHDDKVSSIAFR
EEKPLDLAKVDHWMSYLVREKGEDLLRYKGILYIKGEEYRIVFQGLHMLFSGRPDRKWNENEKKQSELVFIGKDLDKEEL
ERQFKNCIAK

Specific function: Binds GTP. May function as GTP-dependent regulator [H]

COG id: COG0523

COG function: function code R; Putative GTPases (G3E family)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 cobW C-terminal domain [H]

Homologues:

Organism=Homo sapiens, GI148727351, Length=341, Percent_Identity=37.8299120234604, Blast_Score=202, Evalue=4e-52,
Organism=Homo sapiens, GI126722884, Length=341, Percent_Identity=37.5366568914956, Blast_Score=201, Evalue=5e-52,
Organism=Homo sapiens, GI33469141, Length=341, Percent_Identity=37.5366568914956, Blast_Score=201, Evalue=5e-52,
Organism=Homo sapiens, GI146231952, Length=338, Percent_Identity=36.9822485207101, Blast_Score=199, Evalue=2e-51,
Organism=Homo sapiens, GI223941779, Length=340, Percent_Identity=37.0588235294118, Blast_Score=189, Evalue=3e-48,
Organism=Homo sapiens, GI223941776, Length=330, Percent_Identity=36.0606060606061, Blast_Score=182, Evalue=4e-46,
Organism=Homo sapiens, GI119120938, Length=334, Percent_Identity=33.8323353293413, Blast_Score=152, Evalue=4e-37,
Organism=Homo sapiens, GI310124603, Length=227, Percent_Identity=29.9559471365639, Blast_Score=80, Evalue=4e-15,
Organism=Homo sapiens, GI310124599, Length=189, Percent_Identity=29.1005291005291, Blast_Score=75, Evalue=7e-14,
Organism=Escherichia coli, GI87082430, Length=318, Percent_Identity=39.937106918239, Blast_Score=227, Evalue=9e-61,
Organism=Escherichia coli, GI1788499, Length=176, Percent_Identity=36.3636363636364, Blast_Score=94, Evalue=1e-20,
Organism=Saccharomyces cerevisiae, GI6324356, Length=371, Percent_Identity=31.5363881401617, Blast_Score=150, Evalue=2e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003495
- InterPro:   IPR011629 [H]

Pfam domain/function: PF02492 cobW; PF07683 CobW_C [H]

EC number: NA

Molecular weight: Translated: 38008; Mature: 38008

Theoretical pI: Translated: 5.61; Mature: 5.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIMPITKKKIPVAILTGYLGAGKTTLLNRILTEKHNQKIAVIVNEYGEVGIDNQLVVDSE
CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECCH
EEILEMNNGCICCTVRGDLIRILRTLVFSMDQGKVAFDRVLIETTGLADPAPVAQTFFMD
HHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCHHHHHEEEEECCCCCCCHHHHHHHHH
ELLSEIFEVDSIVTVVDSKHVTRHLDDQDEAQEQIAFADVIILNKTDLVSNNELKSLEQR
HHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHH
LVNINPTAKRLYARDCKVNLRDILGINTFDVNRKIEIDPHFLEDHHHHHHDDKVSSIAFR
HCCCCHHHHHHHHHCCCCCHHHHHCCCEECCCCEEECCCCHHHCCCCCCCCCHHHHHHCC
EEKPLDLAKVDHWMSYLVREKGEDLLRYKGILYIKGEEYRIVFQGLHMLFSGRPDRKWNE
CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCEEEHHHHHHHHHCCCCCCCCCC
NEKKQSELVFIGKDLDKEELERQFKNCIAK
CCCCCCCEEEEECCCCHHHHHHHHHHHHCC
>Mature Secondary Structure
MIMPITKKKIPVAILTGYLGAGKTTLLNRILTEKHNQKIAVIVNEYGEVGIDNQLVVDSE
CCCCCCCCCCCCEEEECCCCCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCEEEECCH
EEILEMNNGCICCTVRGDLIRILRTLVFSMDQGKVAFDRVLIETTGLADPAPVAQTFFMD
HHHHHCCCCEEEEEECHHHHHHHHHHHHCCCCCCHHHHHEEEEECCCCCCCHHHHHHHHH
ELLSEIFEVDSIVTVVDSKHVTRHLDDQDEAQEQIAFADVIILNKTDLVSNNELKSLEQR
HHHHHHHHHHHHHHHHCCHHHHHHCCCHHHHHHHHHHHEEEEEECCCCCCCCHHHHHHHH
LVNINPTAKRLYARDCKVNLRDILGINTFDVNRKIEIDPHFLEDHHHHHHDDKVSSIAFR
HCCCCHHHHHHHHHCCCCCHHHHHCCCEECCCCEEECCCCHHHCCCCCCCCCHHHHHHCC
EEKPLDLAKVDHWMSYLVREKGEDLLRYKGILYIKGEEYRIVFQGLHMLFSGRPDRKWNE
CCCCCHHHHHHHHHHHHHHHCCCHHHHHCCEEEEECCCEEEHHHHHHHHHCCCCCCCCCC
NEKKQSELVFIGKDLDKEELERQFKNCIAK
CCCCCCCEEEEECCCCHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7610040; 9278503; 1650347 [H]