Definition | Bacillus licheniformis ATCC 14580, complete genome. |
---|---|
Accession | NC_006322 |
Length | 4,222,645 |
Click here to switch to the map view.
The map label for this gene is 52785348
Identifier: 52785348
GI number: 52785348
Start: 1547929
End: 1549044
Strand: Reverse
Name: 52785348
Synonym: BLi01584
Alternate gene names: NA
Gene position: 1549044-1547929 (Counterclockwise)
Preceding gene: 52785351
Following gene: 52785347
Centisome position: 36.68
GC content: 42.2
Gene sequence:
>1116_bases ATGTACCTGAATAAAAAGAGCGATATTCCTAAATTAACAGATAAAGAGTATTATTTTCTTAGCCAAAACACATATAGTAC CGATAAAATGAAAGAAGCATTCAAGGAAAGAACACCTATAGAGAGTAAATCAAATAAGGCTTTTTTTGTTGATAAAATTA AAAGGGACTCTGACACTGGACTTGATGCGTATGTTTTTGTTCAAGCAAAGAAAAAGGACGGTAAATGGGTTAAACCTAAC GCACCAGAAAACGTCGTCGTGGCCTTCGCTGGAACAAATCCTAAAGAACAGTTTTTTCAAGATGTTATTGATGCAGACGG CGGTAACGTTGTTATGGGTCTTGATCCGAAAAAGAAATCGCAATACATAATCGAAAAAGATGCGAAGGATACATCAAAAA CAATAGGAAAATACAACGCAACCCCCTCACAAGACGCGATGCTTAGCACCGGTAAATACAAATTAATTACGAAAACGTCC CAAATCGGGCAAGCTGATGATCTGGTACGGGAAGTTAAACAAAAGTATAAAGGCACCTCGACGGTTATTTCAACCACCGG ACACTCTCTTGGCGGCGCAGAGGCTGAATACAGCGCTGTGAACAATGATATATACGCAGTCGCATTCAACAATCCTTCCG TCGTTAAATTGCATTCTGAAGAAAAGCAAAAGGAGATCCGAAGCGGCAAATATGACTCGTCTGTAAAAGCGATTGTCAAT CCGGATGATATGACTGGTTCCGGCTGGTGGAATGAGTACGAACGACACGCAGGCAGAACAATATATACCAAAGACCCCTC TACTTCGCGTGTGGAACGACAAATACGACTAGATCCGAAGTATAGCGGCGGTATATTTGGCACAGTGTTTAATGTCGCTG TAGACTACATTGCTACCACAGCAATGGGAATGCCGGATACACACGGCCTCAACAAAGGCAACTTTACCTTCGACGAAAAC GGCAACGTTCAAAATATAGAGGGCGATGAACTCGTTTATGACAAAAATTTAAAAGCGATGCTTCCACCGGAAGTTGCATC CGGAAGTGGCGCAATTAAAGTAACGCCCGAAGTTGCCAAGCAGCTCGCGCAAAAAGTAAATGCTTGCGGACGATGA
Upstream 100 bases:
>100_bases ATTCCTCCAGATGTTATAATGACCAGAGCAAGAAGGATAATTATGTATTTTTTCATAAAACCATCCTTTCCACGTTACAT TTTACATAGTTTGCGGGGTT
Downstream 100 bases:
>100_bases AACGGGAAGCCGAAAACGCTTATCAGGAACACGACGCCGAGATCAATGACCTGAAGCACGATACCTACCGTCAAGTCGGC CACGGTTTATACGACAAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 371; Mature: 371
Protein sequence:
>371_residues MYLNKKSDIPKLTDKEYYFLSQNTYSTDKMKEAFKERTPIESKSNKAFFVDKIKRDSDTGLDAYVFVQAKKKDGKWVKPN APENVVVAFAGTNPKEQFFQDVIDADGGNVVMGLDPKKKSQYIIEKDAKDTSKTIGKYNATPSQDAMLSTGKYKLITKTS QIGQADDLVREVKQKYKGTSTVISTTGHSLGGAEAEYSAVNNDIYAVAFNNPSVVKLHSEEKQKEIRSGKYDSSVKAIVN PDDMTGSGWWNEYERHAGRTIYTKDPSTSRVERQIRLDPKYSGGIFGTVFNVAVDYIATTAMGMPDTHGLNKGNFTFDEN GNVQNIEGDELVYDKNLKAMLPPEVASGSGAIKVTPEVAKQLAQKVNACGR
Sequences:
>Translated_371_residues MYLNKKSDIPKLTDKEYYFLSQNTYSTDKMKEAFKERTPIESKSNKAFFVDKIKRDSDTGLDAYVFVQAKKKDGKWVKPN APENVVVAFAGTNPKEQFFQDVIDADGGNVVMGLDPKKKSQYIIEKDAKDTSKTIGKYNATPSQDAMLSTGKYKLITKTS QIGQADDLVREVKQKYKGTSTVISTTGHSLGGAEAEYSAVNNDIYAVAFNNPSVVKLHSEEKQKEIRSGKYDSSVKAIVN PDDMTGSGWWNEYERHAGRTIYTKDPSTSRVERQIRLDPKYSGGIFGTVFNVAVDYIATTAMGMPDTHGLNKGNFTFDEN GNVQNIEGDELVYDKNLKAMLPPEVASGSGAIKVTPEVAKQLAQKVNACGR >Mature_371_residues MYLNKKSDIPKLTDKEYYFLSQNTYSTDKMKEAFKERTPIESKSNKAFFVDKIKRDSDTGLDAYVFVQAKKKDGKWVKPN APENVVVAFAGTNPKEQFFQDVIDADGGNVVMGLDPKKKSQYIIEKDAKDTSKTIGKYNATPSQDAMLSTGKYKLITKTS QIGQADDLVREVKQKYKGTSTVISTTGHSLGGAEAEYSAVNNDIYAVAFNNPSVVKLHSEEKQKEIRSGKYDSSVKAIVN PDDMTGSGWWNEYERHAGRTIYTKDPSTSRVERQIRLDPKYSGGIFGTVFNVAVDYIATTAMGMPDTHGLNKGNFTFDEN GNVQNIEGDELVYDKNLKAMLPPEVASGSGAIKVTPEVAKQLAQKVNACGR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 41049; Mature: 41049
Theoretical pI: Translated: 9.11; Mature: 9.11
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.2 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYLNKKSDIPKLTDKEYYFLSQNTYSTDKMKEAFKERTPIESKSNKAFFVDKIKRDSDTG CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC LDAYVFVQAKKKDGKWVKPNAPENVVVAFAGTNPKEQFFQDVIDADGGNVVMGLDPKKKS CEEEEEEEEECCCCCEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCC QYIIEKDAKDTSKTIGKYNATPSQDAMLSTGKYKLITKTSQIGQADDLVREVKQKYKGTS CEEEECCCCHHHHHHCCCCCCCCCCCEECCCCEEEEEECHHCCCHHHHHHHHHHHHCCCC TVISTTGHSLGGAEAEYSAVNNDIYAVAFNNPSVVKLHSEEKQKEIRSGKYDSSVKAIVN EEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCEEEECCHHHHHHHHCCCCCCCCEEEEC PDDMTGSGWWNEYERHAGRTIYTKDPSTSRVERQIRLDPKYSGGIFGTVFNVAVDYIATT CCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHH AMGMPDTHGLNKGNFTFDENGNVQNIEGDELVYDKNLKAMLPPEVASGSGAIKVTPEVAK HCCCCCCCCCCCCCEEECCCCCEECCCCCEEEECCCCCEECCCCCCCCCCEEEECHHHHH QLAQKVNACGR HHHHHHHHCCC >Mature Secondary Structure MYLNKKSDIPKLTDKEYYFLSQNTYSTDKMKEAFKERTPIESKSNKAFFVDKIKRDSDTG CCCCCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCC LDAYVFVQAKKKDGKWVKPNAPENVVVAFAGTNPKEQFFQDVIDADGGNVVMGLDPKKKS CEEEEEEEEECCCCCEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCEEEEECCCCCCC QYIIEKDAKDTSKTIGKYNATPSQDAMLSTGKYKLITKTSQIGQADDLVREVKQKYKGTS CEEEECCCCHHHHHHCCCCCCCCCCCEECCCCEEEEEECHHCCCHHHHHHHHHHHHCCCC TVISTTGHSLGGAEAEYSAVNNDIYAVAFNNPSVVKLHSEEKQKEIRSGKYDSSVKAIVN EEEEECCCCCCCCCCHHHHCCCCEEEEEECCCCEEEECCHHHHHHHHCCCCCCCCEEEEC PDDMTGSGWWNEYERHAGRTIYTKDPSTSRVERQIRLDPKYSGGIFGTVFNVAVDYIATT CCCCCCCCCHHHHHHHCCCEEEECCCCHHHHHHEEECCCCCCCCHHHHHHHHHHHHHHHH AMGMPDTHGLNKGNFTFDENGNVQNIEGDELVYDKNLKAMLPPEVASGSGAIKVTPEVAK HCCCCCCCCCCCCCEEECCCCCEECCCCCEEEECCCCCEECCCCCCCCCCEEEECHHHHH QLAQKVNACGR HHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA