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The map label for this gene is ykoV [H]

Identifier: 52785260

GI number: 52785260

Start: 1467764

End: 1468636

Strand: Reverse

Name: ykoV [H]

Synonym: BLi01495

Alternate gene names: 52785260

Gene position: 1468636-1467764 (Counterclockwise)

Preceding gene: 52785261

Following gene: 52785259

Centisome position: 34.78

GC content: 47.77

Gene sequence:

>873_bases
ATGCATACGATGTGGAAAGGCTCTATCAGCTTTGGCCTTGTCAATATCCCCATTAAACTGTTTGCAGCGACAGAGGATAA
GGATATTAAATTAAGGTCGCTTCATAAAGAATGCCGCGCCCCGATTCAGTATGAAAAAAAGTGCACAAACTGCCATCAGG
AAATCGCGCCCGACGACATCGTCAAGGGCTACGAATATGTTAAAGGCAAATACGTCGTCTTATCGGACGATGAGCTGAAG
CAGCTCAAAGAAGAGCAGGAAGACAAGGCCGTCGAAATTGTTGATTTTGTGCAGCTAAAGGAAATCGATCCCATCTATTT
CAACCGTTCATATTTCGTCGGACCGGGAGATAACGGTGTAAAAGCGTACTCACTTTTGCGCGAAGCGCTCAGAAAAACAG
AAAAGATCGGGATCGCCCATATGACCATCCGCTCAAAAAAACAGCTCGCCATTCTTCGCGTCTACGAAAACTGCATTTTA
ATGGAGTCCATCCACTACCCTGATGAGGTCCGAAACGCAGCCCACGTACCCGGTGTTCCGGAAGAAACCGCAGTCAACGA
AAAAGAGCTGCAAACCGCGATTTCATTAATAGACGAGCTGACAACGACATTTGCGCCTGAACAATATGAAGATACGTACA
GAATCGCGCTGATGGATAAAATCAAAGAGAAAATCGACCATAATGAAGGTGTCACGCCAAATGCCGGGGCCGCCGCTCCG
CGCGAGGATGTAATCGATCTCGTGAGCGCTCTCCAAGCCAGCATCGAACGGACAAAAGGGCCTGACCGGGAAGCGGCGAA
AGCGCCTGCAGCAAAAGGAACAGCTGAGAAAAAGAAAAAAACGTCGCGCAAAAAAGCTTCAGAGGCAAAATAA

Upstream 100 bases:

>100_bases
TTCAGCCCGGATGCTTTTTTCCTCTGTCATCCATAAGTTGCTATTCATGAAACAATCTGCAGAGAGGCATCAATAAAAGA
AAAGGAGTTGAACCGAACCG

Downstream 100 bases:

>100_bases
AAAATGGGAATTACGATGCAGCCTGTATTGACTACATCAGCTCCCTCAGGCGGCAATTGGCGGTATGAAGTCAAATATGA
CGGGTATCGGGGTCTTTTAA

Product: YkoV

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 290; Mature: 290

Protein sequence:

>290_residues
MHTMWKGSISFGLVNIPIKLFAATEDKDIKLRSLHKECRAPIQYEKKCTNCHQEIAPDDIVKGYEYVKGKYVVLSDDELK
QLKEEQEDKAVEIVDFVQLKEIDPIYFNRSYFVGPGDNGVKAYSLLREALRKTEKIGIAHMTIRSKKQLAILRVYENCIL
MESIHYPDEVRNAAHVPGVPEETAVNEKELQTAISLIDELTTTFAPEQYEDTYRIALMDKIKEKIDHNEGVTPNAGAAAP
REDVIDLVSALQASIERTKGPDREAAKAPAAKGTAEKKKKTSRKKASEAK

Sequences:

>Translated_290_residues
MHTMWKGSISFGLVNIPIKLFAATEDKDIKLRSLHKECRAPIQYEKKCTNCHQEIAPDDIVKGYEYVKGKYVVLSDDELK
QLKEEQEDKAVEIVDFVQLKEIDPIYFNRSYFVGPGDNGVKAYSLLREALRKTEKIGIAHMTIRSKKQLAILRVYENCIL
MESIHYPDEVRNAAHVPGVPEETAVNEKELQTAISLIDELTTTFAPEQYEDTYRIALMDKIKEKIDHNEGVTPNAGAAAP
REDVIDLVSALQASIERTKGPDREAAKAPAAKGTAEKKKKTSRKKASEAK
>Mature_290_residues
MHTMWKGSISFGLVNIPIKLFAATEDKDIKLRSLHKECRAPIQYEKKCTNCHQEIAPDDIVKGYEYVKGKYVVLSDDELK
QLKEEQEDKAVEIVDFVQLKEIDPIYFNRSYFVGPGDNGVKAYSLLREALRKTEKIGIAHMTIRSKKQLAILRVYENCIL
MESIHYPDEVRNAAHVPGVPEETAVNEKELQTAISLIDELTTTFAPEQYEDTYRIALMDKIKEKIDHNEGVTPNAGAAAP
REDVIDLVSALQASIERTKGPDREAAKAPAAKGTAEKKKKTSRKKASEAK

Specific function: Could be involved in DNA repair during spore germination [H]

COG id: COG1273

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Spore core. Note=Expressed in the center of the spore core, presumably with the nucleoid [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 Ku domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006164
- InterPro:   IPR009187
- InterPro:   IPR016194 [H]

Pfam domain/function: PF02735 Ku [H]

EC number: NA

Molecular weight: Translated: 32661; Mature: 32661

Theoretical pI: Translated: 6.88; Mature: 6.88

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHTMWKGSISFGLVNIPIKLFAATEDKDIKLRSLHKECRAPIQYEKKCTNCHQEIAPDDI
CCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH
VKGYEYVKGKYVVLSDDELKQLKEEQEDKAVEIVDFVQLKEIDPIYFNRSYFVGPGDNGV
HHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCCH
KAYSLLREALRKTEKIGIAHMTIRSKKQLAILRVYENCILMESIHYPDEVRNAAHVPGVP
HHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCC
EETAVNEKELQTAISLIDELTTTFAPEQYEDTYRIALMDKIKEKIDHNEGVTPNAGAAAP
CHHCCCHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
REDVIDLVSALQASIERTKGPDREAAKAPAAKGTAEKKKKTSRKKASEAK
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MHTMWKGSISFGLVNIPIKLFAATEDKDIKLRSLHKECRAPIQYEKKCTNCHQEIAPDDI
CCCCCCCCCCEEEEECCEEEEEECCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHH
VKGYEYVKGKYVVLSDDELKQLKEEQEDKAVEIVDFVQLKEIDPIYFNRSYFVGPGDNGV
HHHHHHHCCCEEEECCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEECCEEEECCCCCCH
KAYSLLREALRKTEKIGIAHMTIRSKKQLAILRVYENCILMESIHYPDEVRNAAHVPGVP
HHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCC
EETAVNEKELQTAISLIDELTTTFAPEQYEDTYRIALMDKIKEKIDHNEGVTPNAGAAAP
CHHCCCHHHHHHHHHHHHHHHHHCCCCHHCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCC
REDVIDLVSALQASIERTKGPDREAAKAPAAKGTAEKKKKTSRKKASEAK
HHHHHHHHHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]