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The map label for this gene is sspE [H]

Identifier: 52784686

GI number: 52784686

Start: 906388

End: 906552

Strand: Direct

Name: sspE [H]

Synonym: BLi00888

Alternate gene names: 52784686

Gene position: 906388-906552 (Clockwise)

Preceding gene: 52784685

Following gene: 52784687

Centisome position: 21.46

GC content: 41.82

Gene sequence:

>165_bases
ATGGCTAACCAACAATCCAAAACAAACGCACAAAAAGTAAGACAACAAAACCAAGCTTCTGCACAAGGTGGTCAGTTCGG
CACTGAATTTGCCAGCGAAACTGACGCGCAGCAAGTAAGACAAAATAACCAACAAGCTGAGCAAAAAAAACAGCAAAACA
GCTAA

Upstream 100 bases:

>100_bases
TTATTGACGGCGGCCGTTCACTGCTCGTATAAATTTTTCGCGTTCAATGAATAGGATATCACCCTCCTGCACAATCTAAT
GGTCGTGGAGGTGATATACA

Downstream 100 bases:

>100_bases
TCACTGAAACAGGAAAAAGCACTTCACCATCGGATGAGGTGCTTTTTTCTTTTTGTTCCGACAAAACTTCCGAATCTTAG
CCAGAATCAGTCAAAGGACA

Product: hypothetical protein

Products: NA

Alternate protein names: SASP [H]

Number of amino acids: Translated: 54; Mature: 53

Protein sequence:

>54_residues
MANQQSKTNAQKVRQQNQASAQGGQFGTEFASETDAQQVRQNNQQAEQKKQQNS

Sequences:

>Translated_54_residues
MANQQSKTNAQKVRQQNQASAQGGQFGTEFASETDAQQVRQNNQQAEQKKQQNS
>Mature_53_residues
ANQQSKTNAQKVRQQNQASAQGGQFGTEFASETDAQQVRQNNQQAEQKKQQNS

Specific function: SASP are proteins degraded in the first minutes of spore germination and provide amino acids for both new protein synthesis and metabolism. These proteins may be involved in dormant spore's high resistance to UV light [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gamma-type SASP family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006341 [H]

Pfam domain/function: PF04259 SASP_gamma [H]

EC number: NA

Molecular weight: Translated: 6024; Mature: 5893

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANQQSKTNAQKVRQQNQASAQGGQFGTEFASETDAQQVRQNNQQAEQKKQQNS
CCCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ANQQSKTNAQKVRQQNQASAQGGQFGTEFASETDAQQVRQNNQQAEQKKQQNS
CCCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 3106326; 9202460; 8946165; 9384377 [H]