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The map label for this gene is yckD [H]

Identifier: 52784638

GI number: 52784638

Start: 856894

End: 857217

Strand: Direct

Name: yckD [H]

Synonym: BLi00840

Alternate gene names: 52784638

Gene position: 856894-857217 (Clockwise)

Preceding gene: 52784637

Following gene: 52784639

Centisome position: 20.29

GC content: 43.52

Gene sequence:

>324_bases
ATGATGCGCAAACTGTGCGTTTGCCTGCTTCTCGTCATTCCGCTGTCATGTACGGCTGTCATGCCCTCTGCCTACGGGGA
AACACGCGTTTATCAAGAGTTGACGGACAAGCAGAAAAATGAACTGGCTTCTTTGCAAAAGGACATTATGGAAAAGAAAA
AACAGCTGATCAATAAGTATGTGGAGTACGGAATACTTGATCAGGAAAGGGGAAAGGAAATCAAGTCTCATATTGAAAAG
CGCTATGAAAAAGAGCGGGAAGACGGATTTTTGCCAAAGTGGAAGCACCATAAAGAAAAGTTTCGCCCGCATCACATTCA
TTAA

Upstream 100 bases:

>100_bases
GCAGCCATAACAGAAAGCCGCTACTAAGCGGCTTTTTTTATGCATAAACACCGCAAAAAAGAAAAAAATAGAATGAATCA
TAGATCAGAAAGGATGTTGC

Downstream 100 bases:

>100_bases
ACTGAAAAAGACGGCGCCTCATTTTCTTCGTGACAAAAGTGTAAAGACAGGTGTAAACTAATACTCATGTAAACTGCTAA
GAGAGTAAAAGAGGTGTTGT

Product: YckD

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 107; Mature: 107

Protein sequence:

>107_residues
MMRKLCVCLLLVIPLSCTAVMPSAYGETRVYQELTDKQKNELASLQKDIMEKKKQLINKYVEYGILDQERGKEIKSHIEK
RYEKEREDGFLPKWKHHKEKFRPHHIH

Sequences:

>Translated_107_residues
MMRKLCVCLLLVIPLSCTAVMPSAYGETRVYQELTDKQKNELASLQKDIMEKKKQLINKYVEYGILDQERGKEIKSHIEK
RYEKEREDGFLPKWKHHKEKFRPHHIH
>Mature_107_residues
MMRKLCVCLLLVIPLSCTAVMPSAYGETRVYQELTDKQKNELASLQKDIMEKKKQLINKYVEYGILDQERGKEIKSHIEK
RYEKEREDGFLPKWKHHKEKFRPHHIH

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12852; Mature: 12852

Theoretical pI: Translated: 9.63; Mature: 9.63

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
2.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMRKLCVCLLLVIPLSCTAVMPSAYGETRVYQELTDKQKNELASLQKDIMEKKKQLINKY
CHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEYGILDQERGKEIKSHIEKRYEKEREDGFLPKWKHHKEKFRPHHIH
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC
>Mature Secondary Structure
MMRKLCVCLLLVIPLSCTAVMPSAYGETRVYQELTDKQKNELASLQKDIMEKKKQLINKY
CHHHHHHHHHHHHHHHHHHHCCHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VEYGILDQERGKEIKSHIEKRYEKEREDGFLPKWKHHKEKFRPHHIH
HHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7704255; 8969502; 9384377 [H]