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The map label for this gene is spsC [H]

Identifier: 52784607

GI number: 52784607

Start: 826359

End: 827468

Strand: Direct

Name: spsC [H]

Synonym: BLi00808

Alternate gene names: 52784607

Gene position: 826359-827468 (Clockwise)

Preceding gene: 52784606

Following gene: 52784608

Centisome position: 19.57

GC content: 47.3

Gene sequence:

>1110_bases
ATGATCCCGTTAGTCAATTTAAAACGTCAATTTCAAACAGTAAAACAGGATATTTTAAAAGAGTTTGAACATGTGCTGGA
CAGCGGCCAATATATATTGGGGCCAAAGGTTGAAGAATTAGAGAAAAGAATAGCTGAAAAGCTTGGTGTAAAAGAAGCGG
TCGCGGTCGCCAACGGAACGGATGCATTGGTGCTGACGCTTGAAGCTTTCGGCATCGGCAAAGGGGATGAAGTGATTACG
ACCCCGTTCACTTTTTTCGCCACCGCCGAAGCCGTCTCAAGGGTGGGGGCTGAACCTGTGTTTGCTGATGTCGATCCTGA
AACATACAATCTTGATCCGAAAAAAATAGAAGAAAAGATCACCCCTGCTACTAAAGCGATCATTCCCGTCCATATCTTCG
GACAGCCGGCTGATATGGACGAGATCATGGAGCTTGCCAAAAAACACGGACTGCTTGTGATTGAGGATGCCTGCCAAGCG
TTCGGCGCATCGTATAAAGAGCGGCCTGTCGGCAGCATCGGGGATGCCGCCTGTTTTTCATTTTTCCCTACAAAAAACTT
GGGAACATTGGGAGACGGGGGAATGGTGACGATTTCAGACCCGGATGCAGCCCGGCAATTAAGAACACTCAGAACCCATG
GCACTAGCAAAAAATACTTCCATGACAAAATCGGTTTCAACAGCCGTCTTGATGAATTACACGCCGCAGCTTTACTCATT
CTTCTTGAGAAAATCGACGGCTGGAATGAACAAAGAAGAAGAGTGGCCAGCCGCTACAGAGAAGGTTTGAAAACGGCGGA
GCACCTCACACTGCCGGCAGAGAAAGAGGACCGCACACATATCTATCATCTCTATTGTATCGGCGCGAAAAACCGCGACT
ACATCATACAATCGCTGAAAGAGCAGGACATTCATTCAGGTGTGTATTATCCTTGCTGCCTTCATCTGCAATCGGTCTAT
TCTTCACTGCAGTACAAAAAAGGCGATTTTCCTATAGCCGAGTCCTTGTCCGAAACCCTTTTCGCCATTCCGATGGATCC
TTTTCTAGCCGCCGAGGAACAAGATCAGATTATTTCTGCGCTGCTGAAAAAAGGAGGAGGGGAAAAGTGA

Upstream 100 bases:

>100_bases
AGTAGGTCTTTTTTTTATGAATAAAATCAAGCCGTGCCAATTTAGCGGCAGGCATCATAACTTATTTTGGAACTTTTTGA
ATTTAGAGGAGGAACAAAGG

Downstream 100 bases:

>100_bases
CGGTTCATTTTGGTTTAATCGGCTGCGGCTATATGTCAAGAAAACATCTTCAAGCACTGGCCGAGTGCGATGATGCAAAG
TTGTCGGCCGTCAGTGATTT

Product: SpsC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 369; Mature: 369

Protein sequence:

>369_residues
MIPLVNLKRQFQTVKQDILKEFEHVLDSGQYILGPKVEELEKRIAEKLGVKEAVAVANGTDALVLTLEAFGIGKGDEVIT
TPFTFFATAEAVSRVGAEPVFADVDPETYNLDPKKIEEKITPATKAIIPVHIFGQPADMDEIMELAKKHGLLVIEDACQA
FGASYKERPVGSIGDAACFSFFPTKNLGTLGDGGMVTISDPDAARQLRTLRTHGTSKKYFHDKIGFNSRLDELHAAALLI
LLEKIDGWNEQRRRVASRYREGLKTAEHLTLPAEKEDRTHIYHLYCIGAKNRDYIIQSLKEQDIHSGVYYPCCLHLQSVY
SSLQYKKGDFPIAESLSETLFAIPMDPFLAAEEQDQIISALLKKGGGEK

Sequences:

>Translated_369_residues
MIPLVNLKRQFQTVKQDILKEFEHVLDSGQYILGPKVEELEKRIAEKLGVKEAVAVANGTDALVLTLEAFGIGKGDEVIT
TPFTFFATAEAVSRVGAEPVFADVDPETYNLDPKKIEEKITPATKAIIPVHIFGQPADMDEIMELAKKHGLLVIEDACQA
FGASYKERPVGSIGDAACFSFFPTKNLGTLGDGGMVTISDPDAARQLRTLRTHGTSKKYFHDKIGFNSRLDELHAAALLI
LLEKIDGWNEQRRRVASRYREGLKTAEHLTLPAEKEDRTHIYHLYCIGAKNRDYIIQSLKEQDIHSGVYYPCCLHLQSVY
SSLQYKKGDFPIAESLSETLFAIPMDPFLAAEEQDQIISALLKKGGGEK
>Mature_369_residues
MIPLVNLKRQFQTVKQDILKEFEHVLDSGQYILGPKVEELEKRIAEKLGVKEAVAVANGTDALVLTLEAFGIGKGDEVIT
TPFTFFATAEAVSRVGAEPVFADVDPETYNLDPKKIEEKITPATKAIIPVHIFGQPADMDEIMELAKKHGLLVIEDACQA
FGASYKERPVGSIGDAACFSFFPTKNLGTLGDGGMVTISDPDAARQLRTLRTHGTSKKYFHDKIGFNSRLDELHAAALLI
LLEKIDGWNEQRRRVASRYREGLKTAEHLTLPAEKEDRTHIYHLYCIGAKNRDYIIQSLKEQDIHSGVYYPCCLHLQSVY
SSLQYKKGDFPIAESLSETLFAIPMDPFLAAEEQDQIISALLKKGGGEK

Specific function: This membrane protein may function as a sensor protein and may transfer the signal of environmental stimuli to the regulatory region of target genes to activate or repress transcription of the genes [H]

COG id: COG0399

COG function: function code M; Predicted pyridoxal phosphate-dependent enzyme apparently involved in regulation of cell wall biogenesis

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the degT/dnrJ/eryC1 family [H]

Homologues:

Organism=Escherichia coli, GI145693159, Length=368, Percent_Identity=35.3260869565217, Blast_Score=202, Evalue=3e-53,
Organism=Escherichia coli, GI2367285, Length=351, Percent_Identity=31.6239316239316, Blast_Score=159, Evalue=4e-40,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000653
- InterPro:   IPR015424
- InterPro:   IPR015421
- InterPro:   IPR015422 [H]

Pfam domain/function: PF01041 DegT_DnrJ_EryC1 [H]

EC number: NA

Molecular weight: Translated: 40982; Mature: 40982

Theoretical pI: Translated: 5.81; Mature: 5.81

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIPLVNLKRQFQTVKQDILKEFEHVLDSGQYILGPKVEELEKRIAEKLGVKEAVAVANGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCHHHHHHHCCCC
DALVLTLEAFGIGKGDEVITTPFTFFATAEAVSRVGAEPVFADVDPETYNLDPKKIEEKI
CEEEEEEEHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHH
TPATKAIIPVHIFGQPADMDEIMELAKKHGLLVIEDACQAFGASYKERPVGSIGDAACFS
CCHHHEEEEEEEECCCCCHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCCCCCCCCHHHHH
FFPTKNLGTLGDGGMVTISDPDAARQLRTLRTHGTSKKYFHDKIGFNSRLDELHAAALLI
HCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHH
LLEKIDGWNEQRRRVASRYREGLKTAEHLTLPAEKEDRTHIYHLYCIGAKNRDYIIQSLK
HHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHH
EQDIHSGVYYPCCLHLQSVYSSLQYKKGDFPIAESLSETLFAIPMDPFLAAEEQDQIISA
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCHHHCCCHHHHHHHH
LLKKGGGEK
HHHCCCCCC
>Mature Secondary Structure
MIPLVNLKRQFQTVKQDILKEFEHVLDSGQYILGPKVEELEKRIAEKLGVKEAVAVANGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCEEECCCHHHHHHHHHHHHCHHHHHHHCCCC
DALVLTLEAFGIGKGDEVITTPFTFFATAEAVSRVGAEPVFADVDPETYNLDPKKIEEKI
CEEEEEEEHHCCCCCCCEEECCHHHHHHHHHHHHCCCCCEEECCCCCCCCCCHHHHHHHH
TPATKAIIPVHIFGQPADMDEIMELAKKHGLLVIEDACQAFGASYKERPVGSIGDAACFS
CCHHHEEEEEEEECCCCCHHHHHHHHHHCCCEEEHHHHHHCCCCCCCCCCCCCCCHHHHH
FFPTKNLGTLGDGGMVTISDPDAARQLRTLRTHGTSKKYFHDKIGFNSRLDELHAAALLI
HCCCCCCCCCCCCCEEEECCCHHHHHHHHHHHCCCCCHHHHHHCCCCHHHHHHHHHHHHH
LLEKIDGWNEQRRRVASRYREGLKTAEHLTLPAEKEDRTHIYHLYCIGAKNRDYIIQSLK
HHHHHCCCCHHHHHHHHHHHHHCCHHHHCCCCCCCCCCCEEEEEEEECCCCHHHHHHHHH
EQDIHSGVYYPCCLHLQSVYSSLQYKKGDFPIAESLSETLFAIPMDPFLAAEEQDQIISA
HHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHEECCCCHHHCCCHHHHHHHH
LLKKGGGEK
HHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 2104607 [H]