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The map label for this gene is rihC [H]

Identifier: 52784539

GI number: 52784539

Start: 745669

End: 746622

Strand: Reverse

Name: rihC [H]

Synonym: BLi00740

Alternate gene names: 52784539

Gene position: 746622-745669 (Counterclockwise)

Preceding gene: 52784561

Following gene: 52784538

Centisome position: 17.68

GC content: 52.31

Gene sequence:

>954_bases
GTGAAAAAGCCCGTTTATTTTAACCATGACGGAGGCGTCGATGATCTCGTCTCTTTATTTCTGCTATTGCAGATGGAAAA
TGTCAAATTGATCGGAACATCCGTCATACCGGCGGATTGCTATTTGGAGCCTGCTCTCAGTGCCAGTCGAAAAATCATTG
ACCGCTTCGGTTCGTACCAGGTCGAGACTGCGGCATCCGATTCGAGAGGGGTGCACCCGTTCCCGAAGGAGTGGCGCATG
CACGCCTTTTATGTCGACGCTCTGCCGATTTTAAATGAAAAAGGCGAAGTCCGGACTCCGGTGTCAGAACTGCCCGCCCA
CCTTCATCTGATTGAATGCGTGAGGCAGAGCCCCGAACCGGTGACACTGCTGTTTACCGGCCCGCTGACAGACTTGGCGA
GGGCCCTTGAGGAAGAGCCGGCGATCATAAAGCACATTGCAAAGCTTGTCTGGATGGGCGGCACCTTCCTTGAGAAAGGA
AATGTGGAAGAGCCTGAGCACGACGGGACGGCGGAATGGAACGCTTTTTGGGACCCTTACAGCGTGAAGACGGTATTCGA
GAGCGACATTCAGATCGAAATGGTCGCGCTTGAAAGCACGAACCAGGTGCCTTTGACAAACGAAATCCGCTCCCATTGGG
CGAGCCTCAGAAAGCATATCGGGATCGACTTTATCGGCCAATGCTATGCGATGTGTCCGCCGCTTGTCCATAACGAAACG
AATTCGACATACTACCTTTGGGATGTGCTGACGACGCTGACGCTCGGCACAGTCGATATGACACGCTCGCGCAGCATCAA
GGCGGTTGTCCATACACAAAGCCCGCGCCAAGGAACGACAGAAGAGCATCCTGACGGCAGAATGGTCAAAGTCGTTGATC
AAGTCGACAGGGATCAATTTTTTGCGTATTTTGAAGAGTTGATGAAAAGAGCCGACCGCATTCCATCTTTATAA

Upstream 100 bases:

>100_bases
TTGTTTAATTTTAGATAAAATATCCTAATTAATGGTAAAAAAGACTTTAGGATCTAATTGATGTAAAATAATTAATATTA
AGAAAAAAGGAGATGTTGCT

Downstream 100 bases:

>100_bases
AAGGAGACTTTCCATGATTAAAAAAGGGACAAACATTTACATCAGGCCGCTCACGGCTGAAGACGCCGAGGCATGCCTCG
AATTGCAGAACGCAAACCGC

Product: hypothetical protein

Products: D-ribose; purine

Alternate protein names: Purine/pyrimidine ribonucleoside hydrolase [H]

Number of amino acids: Translated: 317; Mature: 317

Protein sequence:

>317_residues
MKKPVYFNHDGGVDDLVSLFLLLQMENVKLIGTSVIPADCYLEPALSASRKIIDRFGSYQVETAASDSRGVHPFPKEWRM
HAFYVDALPILNEKGEVRTPVSELPAHLHLIECVRQSPEPVTLLFTGPLTDLARALEEEPAIIKHIAKLVWMGGTFLEKG
NVEEPEHDGTAEWNAFWDPYSVKTVFESDIQIEMVALESTNQVPLTNEIRSHWASLRKHIGIDFIGQCYAMCPPLVHNET
NSTYYLWDVLTTLTLGTVDMTRSRSIKAVVHTQSPRQGTTEEHPDGRMVKVVDQVDRDQFFAYFEELMKRADRIPSL

Sequences:

>Translated_317_residues
MKKPVYFNHDGGVDDLVSLFLLLQMENVKLIGTSVIPADCYLEPALSASRKIIDRFGSYQVETAASDSRGVHPFPKEWRM
HAFYVDALPILNEKGEVRTPVSELPAHLHLIECVRQSPEPVTLLFTGPLTDLARALEEEPAIIKHIAKLVWMGGTFLEKG
NVEEPEHDGTAEWNAFWDPYSVKTVFESDIQIEMVALESTNQVPLTNEIRSHWASLRKHIGIDFIGQCYAMCPPLVHNET
NSTYYLWDVLTTLTLGTVDMTRSRSIKAVVHTQSPRQGTTEEHPDGRMVKVVDQVDRDQFFAYFEELMKRADRIPSL
>Mature_317_residues
MKKPVYFNHDGGVDDLVSLFLLLQMENVKLIGTSVIPADCYLEPALSASRKIIDRFGSYQVETAASDSRGVHPFPKEWRM
HAFYVDALPILNEKGEVRTPVSELPAHLHLIECVRQSPEPVTLLFTGPLTDLARALEEEPAIIKHIAKLVWMGGTFLEKG
NVEEPEHDGTAEWNAFWDPYSVKTVFESDIQIEMVALESTNQVPLTNEIRSHWASLRKHIGIDFIGQCYAMCPPLVHNET
NSTYYLWDVLTTLTLGTVDMTRSRSIKAVVHTQSPRQGTTEEHPDGRMVKVVDQVDRDQFFAYFEELMKRADRIPSL

Specific function: Hydrolyzes both purine and pyrimidine ribonucleosides with a broad-substrate specificity [H]

COG id: COG1957

COG function: function code F; Inosine-uridine nucleoside N-ribohydrolase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the IUNH family. RihC subfamily [H]

Homologues:

Organism=Escherichia coli, GI1786213, Length=121, Percent_Identity=37.1900826446281, Blast_Score=71, Evalue=8e-14,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015910
- InterPro:   IPR023186
- InterPro:   IPR001910
- InterPro:   IPR022976 [H]

Pfam domain/function: PF01156 IU_nuc_hydro [H]

EC number: 3.2.2.1

Molecular weight: Translated: 35951; Mature: 35951

Theoretical pI: Translated: 5.11; Mature: 5.11

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKPVYFNHDGGVDDLVSLFLLLQMENVKLIGTSVIPADCYLEPALSASRKIIDRFGSYQ
CCCCEEECCCCCHHHHHHHHHHHHHCCEEEEECEECCCHHHHCHHHHHHHHHHHHHCCEE
VETAASDSRGVHPFPKEWRMHAFYVDALPILNEKGEVRTPVSELPAHLHLIECVRQSPEP
EEECCCCCCCCCCCCHHHCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
VTLLFTGPLTDLARALEEEPAIIKHIAKLVWMGGTFLEKGNVEEPEHDGTAEWNAFWDPY
EEEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCC
SVKTVFESDIQIEMVALESTNQVPLTNEIRSHWASLRKHIGIDFIGQCYAMCPPLVHNET
EEHHEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHCCCC
NSTYYLWDVLTTLTLGTVDMTRSRSIKAVVHTQSPRQGTTEEHPDGRMVKVVDQVDRDQF
CCEEEHHHHHHHHHHCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHHCHHHH
FAYFEELMKRADRIPSL
HHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MKKPVYFNHDGGVDDLVSLFLLLQMENVKLIGTSVIPADCYLEPALSASRKIIDRFGSYQ
CCCCEEECCCCCHHHHHHHHHHHHHCCEEEEECEECCCHHHHCHHHHHHHHHHHHHCCEE
VETAASDSRGVHPFPKEWRMHAFYVDALPILNEKGEVRTPVSELPAHLHLIECVRQSPEP
EEECCCCCCCCCCCCHHHCEEEEEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCCC
VTLLFTGPLTDLARALEEEPAIIKHIAKLVWMGGTFLEKGNVEEPEHDGTAEWNAFWDPY
EEEEEECCHHHHHHHHHCCCHHHHHHHHHHHCCCCEECCCCCCCCCCCCCCCCCCCCCCC
SVKTVFESDIQIEMVALESTNQVPLTNEIRSHWASLRKHIGIDFIGQCYAMCPPLVHNET
EEHHEECCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHCCCHHCCCC
NSTYYLWDVLTTLTLGTVDMTRSRSIKAVVHTQSPRQGTTEEHPDGRMVKVVDQVDRDQF
CCEEEHHHHHHHHHHCCHHHCCCCCEEEEEECCCCCCCCCCCCCCCCEEHHHHHHCHHHH
FAYFEELMKRADRIPSL
HHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: N-D-ribosylpurine; H2O

Specific reaction: an N-D-ribosylpurine + H2O = D-ribose + a purine

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA