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The map label for this gene is tetR1 [H]

Identifier: 52784506

GI number: 52784506

Start: 709952

End: 710530

Strand: Reverse

Name: tetR1 [H]

Synonym: BLi00705

Alternate gene names: 52784506

Gene position: 710530-709952 (Counterclockwise)

Preceding gene: 52784510

Following gene: 52784483

Centisome position: 16.83

GC content: 43.7

Gene sequence:

>579_bases
TTGGCTGACAGCTACCGCGGGGACAAGCGGATCACAAAATCGAAAACAAACTTAAAAAAAGCCTTGTTTGAACTGCTTGC
TGAAAAAGAATGGGGAAAAATCTCTGTGCAGGATATTACGCAACGGGCAAACTTGAATCGAACGACATTTTATCAGCATT
ATCAAGATAAATACGATTTGCTTCATCAACATATGAGGGATATGTTTGAGGCGATGAAAGAGGATATTTTTTCGCCGCTT
GATATAGATAGCAGCGGGAAAAAGCCAGAAGCGTACTGGTATGTGCTGCGCTTTTATCATCATTTGCAACAGAACAGCGG
CGATTTTGCGATTATCATCAACAGAAGATATGAGCTGAACATTAAGGAGCTGCTCAATGATTTTTGGAATGACAGCTTTT
TGACGGGAATCAAAAAAACGGCAGCTGCTGATACTGACCGCTCAGTGCCTCTCGACATTCAGCGGCGGTTTGTGATTTCC
GCCTTTGCGGGCACAGCCGCATGGTGGCTTGAAAACGGCATGCCTTATCCGCCCGAATTGATGGCTGAATCGATGATCAA
GATCATCCAAAAAAATTGA

Upstream 100 bases:

>100_bases
GAAGTTCAATATGTTAGTTTTAAATTAATAGATTCCATCTGGCCATTCAACCAACAAATGGCAAAGAAGTGTCGAAAAAG
TGATTGAGGAGGCGGCTGAA

Downstream 100 bases:

>100_bases
GCTCAAAAAAAGAGACAAAACGGGTGCTCCCGCTCTGTCTCTTCACCTATTATTTCTGTGCTGCCTTGAGCGCACGCGAG
CCGATGTCCATCCGGTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 192; Mature: 191

Protein sequence:

>192_residues
MADSYRGDKRITKSKTNLKKALFELLAEKEWGKISVQDITQRANLNRTTFYQHYQDKYDLLHQHMRDMFEAMKEDIFSPL
DIDSSGKKPEAYWYVLRFYHHLQQNSGDFAIIINRRYELNIKELLNDFWNDSFLTGIKKTAAADTDRSVPLDIQRRFVIS
AFAGTAAWWLENGMPYPPELMAESMIKIIQKN

Sequences:

>Translated_192_residues
MADSYRGDKRITKSKTNLKKALFELLAEKEWGKISVQDITQRANLNRTTFYQHYQDKYDLLHQHMRDMFEAMKEDIFSPL
DIDSSGKKPEAYWYVLRFYHHLQQNSGDFAIIINRRYELNIKELLNDFWNDSFLTGIKKTAAADTDRSVPLDIQRRFVIS
AFAGTAAWWLENGMPYPPELMAESMIKIIQKN
>Mature_191_residues
ADSYRGDKRITKSKTNLKKALFELLAEKEWGKISVQDITQRANLNRTTFYQHYQDKYDLLHQHMRDMFEAMKEDIFSPLD
IDSSGKKPEAYWYVLRFYHHLQQNSGDFAIIINRRYELNIKELLNDFWNDSFLTGIKKTAAADTDRSVPLDIQRRFVISA
FAGTAAWWLENGMPYPPELMAESMIKIIQKN

Specific function: Unknown

COG id: COG1309

COG function: function code K; Transcriptional regulator

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 2 HTH tetR-type DNA-binding domains [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR015893
- InterPro:   IPR001647 [H]

Pfam domain/function: PF00440 TetR_N [H]

EC number: NA

Molecular weight: Translated: 22637; Mature: 22506

Theoretical pI: Translated: 8.70; Mature: 8.70

Prosite motif: PS50977 HTH_TETR_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MADSYRGDKRITKSKTNLKKALFELLAEKEWGKISVQDITQRANLNRTTFYQHYQDKYDL
CCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
LHQHMRDMFEAMKEDIFSPLDIDSSGKKPEAYWYVLRFYHHLQQNSGDFAIIINRRYELN
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
IKELLNDFWNDSFLTGIKKTAAADTDRSVPLDIQRRFVISAFAGTAAWWLENGMPYPPEL
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
MAESMIKIIQKN
HHHHHHHHHHCC
>Mature Secondary Structure 
ADSYRGDKRITKSKTNLKKALFELLAEKEWGKISVQDITQRANLNRTTFYQHYQDKYDL
CCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHCCCHHHHHHHHHHHHHH
LHQHMRDMFEAMKEDIFSPLDIDSSGKKPEAYWYVLRFYHHLQQNSGDFAIIINRRYELN
HHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCC
IKELLNDFWNDSFLTGIKKTAAADTDRSVPLDIQRRFVISAFAGTAAWWLENGMPYPPEL
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
MAESMIKIIQKN
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584049; 9384377 [H]