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The map label for this gene is yoqW [H]

Identifier: 52784435

GI number: 52784435

Start: 633844

End: 634518

Strand: Reverse

Name: yoqW [H]

Synonym: BLi00631

Alternate gene names: 52784435

Gene position: 634518-633844 (Counterclockwise)

Preceding gene: 52784438

Following gene: 52784431

Centisome position: 15.03

GC content: 47.7

Gene sequence:

>675_bases
ATGTGCGGCAGGTTTACGCTGTTTTCTGAATTTGATGAGATTATTGACCGTTTCGAGATTGATCAAATGGCGATTGAAGA
TTACAGCCCCAGTTATAACATCGCGCCTTCCCAGTATATTCTCGCCGTCATCAACGACGGTTCGCATAACCGGCTAGGGC
GGCTGCGGTGGGGATTGATTCCGCCGTGGTCAAAGGATGAGAAAATCGGTTATAAAATGATCAATGCGCGCGCTGAGACT
TTGGCGGAGAAGCCGAGCTTTCGAAAGCCGCTGATCAGACAAAGGTGCCTCATTCCGGCAGACAGTTTTTATGAGTGGAA
GCGGACCGATGCAAAGACAAAGCGGCCGATGAGGATCAAGCTCAAAACAAATCGACTGTTTTCATTTGCTGGGCTTTGGG
AGAAGTGGCAGCCTGCAGGCGGCAAGCCCGTCTATACATGCACAATCATTACGACAACGCCCAACGATTTAATGAAAGAC
ATTCATGACCGCATGCCCGTCATTCTTGATCGCCAGGCTGAAAAAGAATGGCTGAATCCGAAGAATCAAAACCTTGCATA
CTTAGAAAGCCTTTTAAAACCATATGCGTCAAAAGAGATGGAAGCGTATGAAGTCGCGCCTCTCGTCAATTCACCGCATC
ATAATTCTCCTGAGCTCATCAAAAAAGCCCCTTAA

Upstream 100 bases:

>100_bases
ACGGGCGATGACTGCTTTATCATGGCTGTTTCAGCGGCCTTGTTGGCCATTTATATATAAAAGCCTCAAACTTTCAATAA
ACAAAAAAAGGTGACCTAAG

Downstream 100 bases:

>100_bases
AAGGGGCTTTTTAGCTAGGCGGCCGGGCATGACAACGAAGGCCGCTCCCACTTGATTCAAAAAACTAATTTGTCAGAAGA
TAAAAATCACTGCTGAAGCC

Product: YoqW

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 224; Mature: 224

Protein sequence:

>224_residues
MCGRFTLFSEFDEIIDRFEIDQMAIEDYSPSYNIAPSQYILAVINDGSHNRLGRLRWGLIPPWSKDEKIGYKMINARAET
LAEKPSFRKPLIRQRCLIPADSFYEWKRTDAKTKRPMRIKLKTNRLFSFAGLWEKWQPAGGKPVYTCTIITTTPNDLMKD
IHDRMPVILDRQAEKEWLNPKNQNLAYLESLLKPYASKEMEAYEVAPLVNSPHHNSPELIKKAP

Sequences:

>Translated_224_residues
MCGRFTLFSEFDEIIDRFEIDQMAIEDYSPSYNIAPSQYILAVINDGSHNRLGRLRWGLIPPWSKDEKIGYKMINARAET
LAEKPSFRKPLIRQRCLIPADSFYEWKRTDAKTKRPMRIKLKTNRLFSFAGLWEKWQPAGGKPVYTCTIITTTPNDLMKD
IHDRMPVILDRQAEKEWLNPKNQNLAYLESLLKPYASKEMEAYEVAPLVNSPHHNSPELIKKAP
>Mature_224_residues
MCGRFTLFSEFDEIIDRFEIDQMAIEDYSPSYNIAPSQYILAVINDGSHNRLGRLRWGLIPPWSKDEKIGYKMINARAET
LAEKPSFRKPLIRQRCLIPADSFYEWKRTDAKTKRPMRIKLKTNRLFSFAGLWEKWQPAGGKPVYTCTIITTTPNDLMKD
IHDRMPVILDRQAEKEWLNPKNQNLAYLESLLKPYASKEMEAYEVAPLVNSPHHNSPELIKKAP

Specific function: Unknown

COG id: COG2135

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0361 family [H]

Homologues:

Organism=Homo sapiens, GI54607106, Length=234, Percent_Identity=31.6239316239316, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI54607104, Length=234, Percent_Identity=31.6239316239316, Blast_Score=105, Evalue=3e-23,
Organism=Escherichia coli, GI48994894, Length=186, Percent_Identity=28.494623655914, Blast_Score=66, Evalue=1e-12,
Organism=Saccharomyces cerevisiae, GI6323761, Length=201, Percent_Identity=30.8457711442786, Blast_Score=86, Evalue=5e-18,
Organism=Drosophila melanogaster, GI21355761, Length=228, Percent_Identity=28.9473684210526, Blast_Score=83, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003738 [H]

Pfam domain/function: PF02586 DUF159 [H]

EC number: NA

Molecular weight: Translated: 26087; Mature: 26087

Theoretical pI: Translated: 9.44; Mature: 9.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MCGRFTLFSEFDEIIDRFEIDQMAIEDYSPSYNIAPSQYILAVINDGSHNRLGRLRWGLI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCC
PPWSKDEKIGYKMINARAETLAEKPSFRKPLIRQRCLIPADSFYEWKRTDAKTKRPMRIK
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEE
LKTNRLFSFAGLWEKWQPAGGKPVYTCTIITTTPNDLMKDIHDRMPVILDRQAEKEWLNP
EECCHHHHHHHHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHHCCCEEECCCHHHHHCCC
KNQNLAYLESLLKPYASKEMEAYEVAPLVNSPHHNSPELIKKAP
CCCCHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCHHHHCCCC
>Mature Secondary Structure
MCGRFTLFSEFDEIIDRFEIDQMAIEDYSPSYNIAPSQYILAVINDGSHNRLGRLRWGLI
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCCCCCCCCEEECCC
PPWSKDEKIGYKMINARAETLAEKPSFRKPLIRQRCLIPADSFYEWKRTDAKTKRPMRIK
CCCCCCCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCHHHHHHHCCCCCCCCEEEE
LKTNRLFSFAGLWEKWQPAGGKPVYTCTIITTTPNDLMKDIHDRMPVILDRQAEKEWLNP
EECCHHHHHHHHHHHCCCCCCCEEEEEEEEEECHHHHHHHHHHCCCEEECCCHHHHHCCC
KNQNLAYLESLLKPYASKEMEAYEVAPLVNSPHHNSPELIKKAP
CCCCHHHHHHHHHHHHHCCCCHHEECCCCCCCCCCCHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]