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The map label for this gene is ydiF [H]

Identifier: 52784422

GI number: 52784422

Start: 620966

End: 622891

Strand: Reverse

Name: ydiF [H]

Synonym: BLi00616

Alternate gene names: 52784422

Gene position: 622891-620966 (Counterclockwise)

Preceding gene: 52784427

Following gene: 52784412

Centisome position: 14.75

GC content: 47.35

Gene sequence:

>1926_bases
ATGATGATTTTACAAGTAAATCAGCTTTCAAAATCGTTTGGAGCCGATACGATTTTAACGAATATAAAACTCGAAGTCAG
GTCTCGGGACCGGATTGCGGTCGTCGGACGCAACGGCGCCGGAAAATCGACTCTTCTAAAGATTATCGCAGGAAAGCTCT
CATACGAAAAGGGGGACATCATCAAACCTAAAGATTTGACGATGGGCTACCTTGACCAGCATTCCGGCCTCGATTCCAAG
CTGACGCTTAAAGAGGAATTGCTGTCGGTATTTGATTTTCTTAAAAAAATGGAAAAAGAAATGCGCGCGATCGAGGAAAA
GATGGCGCAAGCCGGACCGGACAAGCTTGAATCATTAATGAAGACATATGACAGGCTTCAGCAGGAGTTCAAGGACAAAG
GCGGCTACCAATATGAGGCAGAGGTCAGATCCGTCATGCACGGGCTCGGCTTTGCGGGATTTGACGACTCCGTCCGCGTT
CAGGATTTAAGCGGAGGCCAAAAAACAAGACTTGCCCTCGGAAAAATGCTTTTGACAAAACCCGACCTCCTCATTTTGGA
CGAACCGACAAACCACTTGGATATCGACACCCTGACATGGCTCGAACAATATTTGCAAAGCTACAGCGGAGCGATTTTAA
TCGTTTCCCATGACAGGTACTTTCTTGACAAAGTGGTTACCCAAGTTTACGAGATTACCAGGTCCCAAAGCAAAAAATAT
ATCGGGAACTACAGCTCTTATCTCCAATTAAAAGCCGAGCAGCTGGAAAGGGAAACAAAGCTTTACGAAAAGCAGCAGGA
CGAAATCGCCAAGCTGCAGGATTTCGTCGATCGGAACTTGGCAAGGGCTTCGACGACGAAACGGGCGCAGAGCAGACGAA
AGCAGCTTGAACGGATGGAGATCATGGACAAACCGCTTGGAGATGAAAAGTCGGCGTCATTCCGCTTTGAAATTACAAGG
CAAAGCGGAAACGATGTACTGCGAGTGGAAGACCTGACGGTAAGCTATCAGGACCAGCCCCCGCTTCTCCGTTCACTGGA
TTTTCGCATTACCCGCGGGGAAAGCGTTGCACTAGTCGGGCCGAACGGAATCGGCAAGTCGACCCTTTTGAAAGCATTGA
TCCAAAAGCTGCAGCCGGTGTCGGGAACAATCGCGACGGGCTCTCACGTCTCAATCGGATACTACGACCAGGAACAGGCT
GAATTGACGTCGTCAAAACGCGTGCTTGACGAGCTTTGGGACGATTATCCGGAGATGAATGAAAAGGATATCAGGACCTG
CCTCGGCAACTTCTTGTTCTCGGGAGAAGATGTATTAAAGCCTGTACATGCATTAAGCGGTGGCGAAAAAGCCAGGCTTG
CCCTCGCCAAGCTGATGTTGCAAAAAGCGAACTTCCTTATTCTTGATGAGCCGACAAACCATCTCGACCTGGACAGCAAG
GAAGTCTTGGAGAACGCTTTAATCGATTACCCGGGAACGATATTATTTGTGTCCCATGACCGCTATTTTATCAACCGGAT
TGCGACAAAAGTACTGGAGCTTTCTCGCGACAAAGCCGAAGAATATTTAGGCGACTACGATTATTACACGGAAAAAAAAG
CGCAGCAGCTTGAACTGAAAGAACTAGAAAAACAGACGGAAGAGCGTCAGAAAGCCGCTTCCGAAAAACCGGGCGCAAAA
AAGAGCTATGAAGAAGAAAAAGAGCTGAAAAGAAAAGAACGCCAGCGGCAGCGCAGGATTGAAGACATCGAAACAAGAAT
TACGGCCATTGAAGAACAAATTGAAAAGAATGAAGAGCTCCTATGCAATCCCGACGTCTTCCAAGACCACGAGAAGGTTC
AGGAAATCCACTCTGAAAATGAACAGCTGAATGAGGAGCTTGAACAGCTGTTATCAGAATGGGAAACACTATCTACAAAT
GAATAA

Upstream 100 bases:

>100_bases
GTCTTTTTCTTTGGCTAAAATCTTCCAGACTTCACTTAATTGTTTGCTGACTGCGCGGTGATAGGCTACACTTAAAATAG
CAGACAAGAGGTGAAAGATC

Downstream 100 bases:

>100_bases
AGGATGAGCCGCTCCAAGCCGGAGCGGTTTTTTTGTCCACAATTGAAATCCTTTATTTAAAAGAAAGAAAGCGATTTACC
CACAATATCCACAAATAACA

Product: YdiF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 641; Mature: 641

Protein sequence:

>641_residues
MMILQVNQLSKSFGADTILTNIKLEVRSRDRIAVVGRNGAGKSTLLKIIAGKLSYEKGDIIKPKDLTMGYLDQHSGLDSK
LTLKEELLSVFDFLKKMEKEMRAIEEKMAQAGPDKLESLMKTYDRLQQEFKDKGGYQYEAEVRSVMHGLGFAGFDDSVRV
QDLSGGQKTRLALGKMLLTKPDLLILDEPTNHLDIDTLTWLEQYLQSYSGAILIVSHDRYFLDKVVTQVYEITRSQSKKY
IGNYSSYLQLKAEQLERETKLYEKQQDEIAKLQDFVDRNLARASTTKRAQSRRKQLERMEIMDKPLGDEKSASFRFEITR
QSGNDVLRVEDLTVSYQDQPPLLRSLDFRITRGESVALVGPNGIGKSTLLKALIQKLQPVSGTIATGSHVSIGYYDQEQA
ELTSSKRVLDELWDDYPEMNEKDIRTCLGNFLFSGEDVLKPVHALSGGEKARLALAKLMLQKANFLILDEPTNHLDLDSK
EVLENALIDYPGTILFVSHDRYFINRIATKVLELSRDKAEEYLGDYDYYTEKKAQQLELKELEKQTEERQKAASEKPGAK
KSYEEEKELKRKERQRQRRIEDIETRITAIEEQIEKNEELLCNPDVFQDHEKVQEIHSENEQLNEELEQLLSEWETLSTN
E

Sequences:

>Translated_641_residues
MMILQVNQLSKSFGADTILTNIKLEVRSRDRIAVVGRNGAGKSTLLKIIAGKLSYEKGDIIKPKDLTMGYLDQHSGLDSK
LTLKEELLSVFDFLKKMEKEMRAIEEKMAQAGPDKLESLMKTYDRLQQEFKDKGGYQYEAEVRSVMHGLGFAGFDDSVRV
QDLSGGQKTRLALGKMLLTKPDLLILDEPTNHLDIDTLTWLEQYLQSYSGAILIVSHDRYFLDKVVTQVYEITRSQSKKY
IGNYSSYLQLKAEQLERETKLYEKQQDEIAKLQDFVDRNLARASTTKRAQSRRKQLERMEIMDKPLGDEKSASFRFEITR
QSGNDVLRVEDLTVSYQDQPPLLRSLDFRITRGESVALVGPNGIGKSTLLKALIQKLQPVSGTIATGSHVSIGYYDQEQA
ELTSSKRVLDELWDDYPEMNEKDIRTCLGNFLFSGEDVLKPVHALSGGEKARLALAKLMLQKANFLILDEPTNHLDLDSK
EVLENALIDYPGTILFVSHDRYFINRIATKVLELSRDKAEEYLGDYDYYTEKKAQQLELKELEKQTEERQKAASEKPGAK
KSYEEEKELKRKERQRQRRIEDIETRITAIEEQIEKNEELLCNPDVFQDHEKVQEIHSENEQLNEELEQLLSEWETLSTN
E
>Mature_641_residues
MMILQVNQLSKSFGADTILTNIKLEVRSRDRIAVVGRNGAGKSTLLKIIAGKLSYEKGDIIKPKDLTMGYLDQHSGLDSK
LTLKEELLSVFDFLKKMEKEMRAIEEKMAQAGPDKLESLMKTYDRLQQEFKDKGGYQYEAEVRSVMHGLGFAGFDDSVRV
QDLSGGQKTRLALGKMLLTKPDLLILDEPTNHLDIDTLTWLEQYLQSYSGAILIVSHDRYFLDKVVTQVYEITRSQSKKY
IGNYSSYLQLKAEQLERETKLYEKQQDEIAKLQDFVDRNLARASTTKRAQSRRKQLERMEIMDKPLGDEKSASFRFEITR
QSGNDVLRVEDLTVSYQDQPPLLRSLDFRITRGESVALVGPNGIGKSTLLKALIQKLQPVSGTIATGSHVSIGYYDQEQA
ELTSSKRVLDELWDDYPEMNEKDIRTCLGNFLFSGEDVLKPVHALSGGEKARLALAKLMLQKANFLILDEPTNHLDLDSK
EVLENALIDYPGTILFVSHDRYFINRIATKVLELSRDKAEEYLGDYDYYTEKKAQQLELKELEKQTEERQKAASEKPGAK
KSYEEEKELKRKERQRQRRIEDIETRITAIEEQIEKNEELLCNPDVFQDHEKVQEIHSENEQLNEELEQLLSEWETLSTN
E

Specific function: Unknown

COG id: COG0488

COG function: function code R; ATPase components of ABC transporters with duplicated ATPase domains

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 2 ABC transporter domains [H]

Homologues:

Organism=Homo sapiens, GI10947137, Length=554, Percent_Identity=33.2129963898917, Blast_Score=280, Evalue=2e-75,
Organism=Homo sapiens, GI27881506, Length=554, Percent_Identity=33.2129963898917, Blast_Score=280, Evalue=2e-75,
Organism=Homo sapiens, GI148612853, Length=530, Percent_Identity=31.5094339622642, Blast_Score=265, Evalue=1e-70,
Organism=Homo sapiens, GI69354671, Length=548, Percent_Identity=30.4744525547445, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI10947135, Length=548, Percent_Identity=30.6569343065693, Blast_Score=227, Evalue=2e-59,
Organism=Homo sapiens, GI157502201, Length=251, Percent_Identity=27.8884462151394, Blast_Score=72, Evalue=2e-12,
Organism=Homo sapiens, GI157502203, Length=251, Percent_Identity=27.8884462151394, Blast_Score=71, Evalue=3e-12,
Organism=Homo sapiens, GI9955970, Length=236, Percent_Identity=27.1186440677966, Blast_Score=67, Evalue=5e-11,
Organism=Escherichia coli, GI1789751, Length=617, Percent_Identity=33.063209076175, Blast_Score=337, Evalue=2e-93,
Organism=Escherichia coli, GI1787041, Length=537, Percent_Identity=35.0093109869646, Blast_Score=323, Evalue=3e-89,
Organism=Escherichia coli, GI2367384, Length=537, Percent_Identity=35.5679702048417, Blast_Score=304, Evalue=1e-83,
Organism=Escherichia coli, GI1787182, Length=649, Percent_Identity=33.1278890600924, Blast_Score=299, Evalue=4e-82,
Organism=Escherichia coli, GI1788165, Length=192, Percent_Identity=30.2083333333333, Blast_Score=80, Evalue=6e-16,
Organism=Escherichia coli, GI1788225, Length=225, Percent_Identity=27.1111111111111, Blast_Score=69, Evalue=1e-12,
Organism=Escherichia coli, GI1789864, Length=244, Percent_Identity=23.7704918032787, Blast_Score=68, Evalue=2e-12,
Organism=Escherichia coli, GI1787758, Length=198, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1787164, Length=235, Percent_Identity=29.7872340425532, Blast_Score=64, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17555318, Length=542, Percent_Identity=30.9963099630996, Blast_Score=269, Evalue=3e-72,
Organism=Caenorhabditis elegans, GI17553372, Length=534, Percent_Identity=32.9588014981273, Blast_Score=258, Evalue=9e-69,
Organism=Caenorhabditis elegans, GI17559834, Length=522, Percent_Identity=29.6934865900383, Blast_Score=230, Evalue=2e-60,
Organism=Caenorhabditis elegans, GI212646699, Length=295, Percent_Identity=25.7627118644068, Blast_Score=72, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI193211017, Length=175, Percent_Identity=33.1428571428571, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI71996809, Length=180, Percent_Identity=31.1111111111111, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI193211015, Length=175, Percent_Identity=33.1428571428571, Blast_Score=70, Evalue=3e-12,
Organism=Caenorhabditis elegans, GI17532409, Length=261, Percent_Identity=27.5862068965517, Blast_Score=68, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17567243, Length=226, Percent_Identity=26.1061946902655, Blast_Score=66, Evalue=6e-11,
Organism=Saccharomyces cerevisiae, GI6320874, Length=548, Percent_Identity=31.5693430656934, Blast_Score=263, Evalue=5e-71,
Organism=Saccharomyces cerevisiae, GI6321121, Length=535, Percent_Identity=30.8411214953271, Blast_Score=253, Evalue=5e-68,
Organism=Saccharomyces cerevisiae, GI6325030, Length=395, Percent_Identity=29.3670886075949, Blast_Score=128, Evalue=2e-30,
Organism=Saccharomyces cerevisiae, GI6324314, Length=391, Percent_Identity=25.8312020460358, Blast_Score=116, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6323278, Length=248, Percent_Identity=26.6129032258064, Blast_Score=102, Evalue=1e-22,
Organism=Saccharomyces cerevisiae, GI6323217, Length=248, Percent_Identity=29.4354838709677, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI24642252, Length=533, Percent_Identity=32.0825515947467, Blast_Score=288, Evalue=8e-78,
Organism=Drosophila melanogaster, GI18859989, Length=533, Percent_Identity=32.0825515947467, Blast_Score=288, Evalue=8e-78,
Organism=Drosophila melanogaster, GI24666836, Length=547, Percent_Identity=32.9067641681901, Blast_Score=279, Evalue=5e-75,
Organism=Drosophila melanogaster, GI24641342, Length=542, Percent_Identity=30.8118081180812, Blast_Score=246, Evalue=4e-65,
Organism=Drosophila melanogaster, GI24653245, Length=168, Percent_Identity=32.7380952380952, Blast_Score=73, Evalue=7e-13,
Organism=Drosophila melanogaster, GI281363262, Length=168, Percent_Identity=32.7380952380952, Blast_Score=73, Evalue=7e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR017871
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 73667; Mature: 73667

Theoretical pI: Translated: 5.08; Mature: 5.08

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMILQVNQLSKSFGADTILTNIKLEVRSRDRIAVVGRNGAGKSTLLKIIAGKLSYEKGDI
CEEEEEHHHHHHHCCCHHHHEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCC
IKPKDLTMGYLDQHSGLDSKLTLKEELLSVFDFLKKMEKEMRAIEEKMAQAGPDKLESLM
CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KTYDRLQQEFKDKGGYQYEAEVRSVMHGLGFAGFDDSVRVQDLSGGQKTRLALGKMLLTK
HHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCC
PDLLILDEPTNHLDIDTLTWLEQYLQSYSGAILIVSHDRYFLDKVVTQVYEITRSQSKKY
CCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
IGNYSSYLQLKAEQLERETKLYEKQQDEIAKLQDFVDRNLARASTTKRAQSRRKQLERME
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMDKPLGDEKSASFRFEITRQSGNDVLRVEDLTVSYQDQPPLLRSLDFRITRGESVALVG
HHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHCCCEEECCCEEEEEC
PNGIGKSTLLKALIQKLQPVSGTIATGSHVSIGYYDQEQAELTSSKRVLDELWDDYPEMN
CCCCCHHHHHHHHHHHCCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
EKDIRTCLGNFLFSGEDVLKPVHALSGGEKARLALAKLMLQKANFLILDEPTNHLDLDSK
HHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHH
EVLENALIDYPGTILFVSHDRYFINRIATKVLELSRDKAEEYLGDYDYYTEKKAQQLELK
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ELEKQTEERQKAASEKPGAKKSYEEEKELKRKERQRQRRIEDIETRITAIEEQIEKNEEL
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LCNPDVFQDHEKVQEIHSENEQLNEELEQLLSEWETLSTNE
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure
MMILQVNQLSKSFGADTILTNIKLEVRSRDRIAVVGRNGAGKSTLLKIIAGKLSYEKGDI
CEEEEEHHHHHHHCCCHHHHEEEEEEECCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCC
IKPKDLTMGYLDQHSGLDSKLTLKEELLSVFDFLKKMEKEMRAIEEKMAQAGPDKLESLM
CCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
KTYDRLQQEFKDKGGYQYEAEVRSVMHGLGFAGFDDSVRVQDLSGGQKTRLALGKMLLTK
HHHHHHHHHHHHCCCCEEHHHHHHHHHHCCCCCCCCCCEEEECCCCCHHHHHHHHHHHCC
PDLLILDEPTNHLDIDTLTWLEQYLQSYSGAILIVSHDRYFLDKVVTQVYEITRSQSKKY
CCEEEEECCCCCCCCHHHHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHH
IGNYSSYLQLKAEQLERETKLYEKQQDEIAKLQDFVDRNLARASTTKRAQSRRKQLERME
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IMDKPLGDEKSASFRFEITRQSGNDVLRVEDLTVSYQDQPPLLRSLDFRITRGESVALVG
HHCCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCHHHHCCCEEECCCEEEEEC
PNGIGKSTLLKALIQKLQPVSGTIATGSHVSIGYYDQEQAELTSSKRVLDELWDDYPEMN
CCCCCHHHHHHHHHHHCCCCCCEEECCCEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCC
EKDIRTCLGNFLFSGEDVLKPVHALSGGEKARLALAKLMLQKANFLILDEPTNHLDLDSK
HHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHCCEEEEECCCCCCCCCHH
EVLENALIDYPGTILFVSHDRYFINRIATKVLELSRDKAEEYLGDYDYYTEKKAQQLELK
HHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHH
ELEKQTEERQKAASEKPGAKKSYEEEKELKRKERQRQRRIEDIETRITAIEEQIEKNEEL
HHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCE
LCNPDVFQDHEKVQEIHSENEQLNEELEQLLSEWETLSTNE
ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9202461; 9384377 [H]