BacMap

Definition	Bacillus licheniformis ATCC 14580, complete genome.
Accession	NC_006322
Length	4,222,645

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The map label for this gene is yclH [H]

Identifier: 52784277

GI number: 52784277

Start: 458069

End: 458752

Strand: Reverse

Name: yclH [H]

Synonym: BLi00457

Alternate gene names: 52784277

Gene position: 458752-458069 (Counterclockwise)

Preceding gene: 52784278

Following gene: 52784272

Centisome position: 10.86

GC content: 46.49

Gene sequence:

>684_bases
ATGGGCAGTATTTTAGAATTTCAGAATGTCGGCTATTGGTATAAAAATCAGGATCAGCCTCTATTCGAGGATATCAGCAT
TCAATTCAGCCAAGGACTCTTATATACGATTGTCGGGACTTCCGGTTCCGGCAAAACCACCTTTTTATCGTTGGCGGGCG
GACTTGACGCGCCAAAAGAGGGGAACATCCTCTACAAAGGAGAAAACATTTCAAAAATCGGACTGACCAGCTTCCGCAAT
CAATATGTATCGATCGTTTTTCAGTCCTATAACCTGCTGCCGTATATGACGGCTCTCCAAAATATCACGTCGGCCATGGA
AATCACCGGATCTCAGGTCAAAAACAAGGAACAATACGCTTTGGAGATGCTCGAAAAGGTCGGCATCGGCGAAAAGCAGG
CCAGACAGAAAGTATTGACATTAAGCGGCGGCCAGCAGCAGCGTGTCTCCATCATCAGAGCGTTCTGCTGTGACACGGAT
TTAATCGTCGCCGATGAACCGACAGGCAATTTGGATGAAGATACATCAAAAGACATCGTCCGGCTCTTTCAAAACCTTGC
CCACCAAGAAAACAAATGCGTCATCATGGTCACCCATGATGAACAGATCGCAAAGGTATCCGATGTCAACATCACGCTTT
CAAGGGGCGGCTTTACCGTCAAAAAACGCATATCAGCAGGATAA

Upstream 100 bases:

>100_bases
TTTAATTGCGATGTTCGCGACACTCCTTCCGTCCATATCTGTTTTAAGGCTCCATCCGAAAACGATTTTAACAAAACAAG
AATAGAAAGAAGTGAAGATT

Downstream 100 bases:

>100_bases
GGGGAGCGGCATGAGCCGTTCCCCTTCTTTTATTATGAAGCAAATGCTTCTGCAGCAGCAGCCAAATAATACGAGAGGCC
TGTTTGCTGATTTTCAAGCA

Product: YclH

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 227; Mature: 226

Protein sequence:

>227_residues
MGSILEFQNVGYWYKNQDQPLFEDISIQFSQGLLYTIVGTSGSGKTTFLSLAGGLDAPKEGNILYKGENISKIGLTSFRN
QYVSIVFQSYNLLPYMTALQNITSAMEITGSQVKNKEQYALEMLEKVGIGEKQARQKVLTLSGGQQQRVSIIRAFCCDTD
LIVADEPTGNLDEDTSKDIVRLFQNLAHQENKCVIMVTHDEQIAKVSDVNITLSRGGFTVKKRISAG

Sequences:

>Translated_227_residues
MGSILEFQNVGYWYKNQDQPLFEDISIQFSQGLLYTIVGTSGSGKTTFLSLAGGLDAPKEGNILYKGENISKIGLTSFRN
QYVSIVFQSYNLLPYMTALQNITSAMEITGSQVKNKEQYALEMLEKVGIGEKQARQKVLTLSGGQQQRVSIIRAFCCDTD
LIVADEPTGNLDEDTSKDIVRLFQNLAHQENKCVIMVTHDEQIAKVSDVNITLSRGGFTVKKRISAG
>Mature_226_residues
GSILEFQNVGYWYKNQDQPLFEDISIQFSQGLLYTIVGTSGSGKTTFLSLAGGLDAPKEGNILYKGENISKIGLTSFRNQ
YVSIVFQSYNLLPYMTALQNITSAMEITGSQVKNKEQYALEMLEKVGIGEKQARQKVLTLSGGQQQRVSIIRAFCCDTDL
IVADEPTGNLDEDTSKDIVRLFQNLAHQENKCVIMVTHDEQIAKVSDVNITLSRGGFTVKKRISAG

Specific function: Part Of The Abc Transporter Complex Lolcde Involved In The Translocation Of Mature Outer Membrane-Directed Lipoproteins, From The Inner Membrane To The Periplasmic Chaperone, Lola. Responsible For The Formation Of The Lola-Lipoprotein Complex In An ATP-De

COG id: COG1136

COG function: function code V; ABC-type antimicrobial peptide transport system, ATPase component

Gene ontology:

Cell location: Inner Membrane-Associated [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI105990541, Length=184, Percent_Identity=29.8913043478261, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI171184400, Length=228, Percent_Identity=28.0701754385965, Blast_Score=77, Evalue=1e-14,
Organism=Homo sapiens, GI42490749, Length=226, Percent_Identity=29.2035398230088, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI150417984, Length=201, Percent_Identity=28.3582089552239, Blast_Score=74, Evalue=7e-14,
Organism=Homo sapiens, GI21536376, Length=199, Percent_Identity=25.6281407035176, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI215820660, Length=223, Percent_Identity=28.6995515695067, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI20143975, Length=223, Percent_Identity=28.6995515695067, Blast_Score=72, Evalue=5e-13,
Organism=Homo sapiens, GI31657092, Length=197, Percent_Identity=27.9187817258883, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI42741659, Length=215, Percent_Identity=27.906976744186, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI9961252, Length=214, Percent_Identity=26.1682242990654, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI4505771, Length=214, Percent_Identity=26.1682242990654, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI255708477, Length=219, Percent_Identity=28.7671232876712, Blast_Score=68, Evalue=9e-12,
Organism=Homo sapiens, GI9961250, Length=214, Percent_Identity=26.1682242990654, Blast_Score=67, Evalue=9e-12,
Organism=Homo sapiens, GI148612844, Length=219, Percent_Identity=28.7671232876712, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI46592964, Length=226, Percent_Identity=28.3185840707965, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI46592915, Length=207, Percent_Identity=28.9855072463768, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI46592971, Length=226, Percent_Identity=28.3185840707965, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI46592956, Length=207, Percent_Identity=28.9855072463768, Blast_Score=67, Evalue=1e-11,
Organism=Homo sapiens, GI46592898, Length=207, Percent_Identity=28.9855072463768, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI46592978, Length=207, Percent_Identity=28.9855072463768, Blast_Score=67, Evalue=2e-11,
Organism=Homo sapiens, GI9955968, Length=227, Percent_Identity=23.7885462555066, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI9955966, Length=227, Percent_Identity=23.7885462555066, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI45243524, Length=227, Percent_Identity=23.7885462555066, Blast_Score=65, Evalue=4e-11,
Organism=Homo sapiens, GI116734710, Length=185, Percent_Identity=24.8648648648649, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI73747915, Length=221, Percent_Identity=24.4343891402715, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI87081834, Length=204, Percent_Identity=36.2745098039216, Blast_Score=141, Evalue=4e-35,
Organism=Escherichia coli, GI1787105, Length=221, Percent_Identity=33.0316742081448, Blast_Score=121, Evalue=3e-29,
Organism=Escherichia coli, GI1786703, Length=195, Percent_Identity=35.8974358974359, Blast_Score=120, Evalue=6e-29,
Organism=Escherichia coli, GI1787029, Length=217, Percent_Identity=33.1797235023041, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788761, Length=205, Percent_Identity=32.6829268292683, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI1789873, Length=216, Percent_Identity=32.8703703703704, Blast_Score=112, Evalue=2e-26,
Organism=Escherichia coli, GI87081709, Length=200, Percent_Identity=32.5, Blast_Score=112, Evalue=3e-26,
Organism=Escherichia coli, GI1786563, Length=208, Percent_Identity=32.6923076923077, Blast_Score=110, Evalue=8e-26,
Organism=Escherichia coli, GI1789032, Length=181, Percent_Identity=32.5966850828729, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1788225, Length=228, Percent_Identity=32.4561403508772, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1786398, Length=208, Percent_Identity=28.3653846153846, Blast_Score=107, Evalue=9e-25,
Organism=Escherichia coli, GI1789672, Length=220, Percent_Identity=33.1818181818182, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1788644, Length=213, Percent_Identity=34.7417840375587, Blast_Score=104, Evalue=6e-24,
Organism=Escherichia coli, GI1787712, Length=201, Percent_Identity=34.3283582089552, Blast_Score=101, Evalue=5e-23,
Organism=Escherichia coli, GI1786872, Length=217, Percent_Identity=32.258064516129, Blast_Score=100, Evalue=6e-23,
Organism=Escherichia coli, GI1787370, Length=193, Percent_Identity=32.6424870466321, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI87081791, Length=222, Percent_Identity=29.7297297297297, Blast_Score=100, Evalue=1e-22,
Organism=Escherichia coli, GI1787089, Length=211, Percent_Identity=31.2796208530806, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI1789891, Length=202, Percent_Identity=30.6930693069307, Blast_Score=95, Evalue=3e-21,
Organism=Escherichia coli, GI87082267, Length=216, Percent_Identity=27.7777777777778, Blast_Score=93, Evalue=1e-20,
Organism=Escherichia coli, GI1787143, Length=201, Percent_Identity=32.3383084577114, Blast_Score=92, Evalue=4e-20,
Organism=Escherichia coli, GI1788450, Length=197, Percent_Identity=27.9187817258883, Blast_Score=91, Evalue=5e-20,
Organism=Escherichia coli, GI1786698, Length=215, Percent_Identity=29.3023255813954, Blast_Score=91, Evalue=6e-20,
Organism=Escherichia coli, GI1789963, Length=214, Percent_Identity=30.8411214953271, Blast_Score=90, Evalue=1e-19,
Organism=Escherichia coli, GI1789962, Length=184, Percent_Identity=28.804347826087, Blast_Score=85, Evalue=4e-18,
Organism=Escherichia coli, GI1788506, Length=210, Percent_Identity=27.6190476190476, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI1790467, Length=183, Percent_Identity=31.1475409836066, Blast_Score=85, Evalue=5e-18,
Organism=Escherichia coli, GI48994883, Length=202, Percent_Identity=30.6930693069307, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI1790544, Length=203, Percent_Identity=29.5566502463054, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1787164, Length=183, Percent_Identity=28.9617486338798, Blast_Score=82, Evalue=4e-17,
Organism=Escherichia coli, GI1787041, Length=205, Percent_Identity=29.2682926829268, Blast_Score=81, Evalue=5e-17,
Organism=Escherichia coli, GI1786253, Length=202, Percent_Identity=27.2277227722772, Blast_Score=80, Evalue=2e-16,
Organism=Escherichia coli, GI48994997, Length=191, Percent_Identity=30.8900523560209, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1789586, Length=213, Percent_Identity=29.5774647887324, Blast_Score=78, Evalue=4e-16,
Organism=Escherichia coli, GI1788210, Length=221, Percent_Identity=28.0542986425339, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1790534, Length=191, Percent_Identity=28.2722513089005, Blast_Score=77, Evalue=7e-16,
Organism=Escherichia coli, GI1787112, Length=202, Percent_Identity=31.6831683168317, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI1787500, Length=212, Percent_Identity=25.4716981132075, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787547, Length=225, Percent_Identity=24.4444444444444, Blast_Score=75, Evalue=3e-15,
Organism=Escherichia coli, GI1787759, Length=221, Percent_Identity=28.9592760180996, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1789991, Length=232, Percent_Identity=24.5689655172414, Blast_Score=73, Evalue=1e-14,
Organism=Escherichia coli, GI1789890, Length=225, Percent_Identity=29.7777777777778, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI1787758, Length=184, Percent_Identity=28.2608695652174, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1788897, Length=211, Percent_Identity=24.1706161137441, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786345, Length=214, Percent_Identity=27.1028037383178, Blast_Score=71, Evalue=7e-14,
Organism=Escherichia coli, GI145693107, Length=241, Percent_Identity=27.3858921161826, Blast_Score=69, Evalue=2e-13,
Organism=Escherichia coli, GI1790525, Length=230, Percent_Identity=24.3478260869565, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI1790190, Length=196, Percent_Identity=26.530612244898, Blast_Score=68, Evalue=5e-13,
Organism=Escherichia coli, GI48995001, Length=204, Percent_Identity=26.4705882352941, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI1789864, Length=201, Percent_Identity=22.3880597014925, Blast_Score=67, Evalue=8e-13,
Organism=Escherichia coli, GI87082268, Length=214, Percent_Identity=24.7663551401869, Blast_Score=67, Evalue=1e-12,
Organism=Escherichia coli, GI1790162, Length=220, Percent_Identity=26.3636363636364, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1789593, Length=185, Percent_Identity=25.9459459459459, Blast_Score=65, Evalue=3e-12,
Organism=Escherichia coli, GI1786803, Length=195, Percent_Identity=27.6923076923077, Blast_Score=65, Evalue=5e-12,
Organism=Escherichia coli, GI1786319, Length=222, Percent_Identity=26.5765765765766, Blast_Score=64, Evalue=7e-12,
Organism=Escherichia coli, GI1788540, Length=198, Percent_Identity=26.2626262626263, Blast_Score=64, Evalue=9e-12,
Organism=Escherichia coli, GI1786653, Length=189, Percent_Identity=24.8677248677249, Blast_Score=62, Evalue=2e-11,
Organism=Escherichia coli, GI1790739, Length=205, Percent_Identity=26.3414634146341, Blast_Score=62, Evalue=3e-11,
Organism=Escherichia coli, GI2367384, Length=197, Percent_Identity=22.8426395939086, Blast_Score=61, Evalue=5e-11,
Organism=Caenorhabditis elegans, GI193208177, Length=223, Percent_Identity=28.6995515695067, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI71992290, Length=227, Percent_Identity=26.8722466960352, Blast_Score=80, Evalue=1e-15,
Organism=Caenorhabditis elegans, GI71984940, Length=215, Percent_Identity=29.3023255813954, Blast_Score=74, Evalue=6e-14,
Organism=Caenorhabditis elegans, GI71996550, Length=213, Percent_Identity=27.6995305164319, Blast_Score=72, Evalue=3e-13,
Organism=Caenorhabditis elegans, GI115534520, Length=220, Percent_Identity=26.8181818181818, Blast_Score=71, Evalue=4e-13,
Organism=Caenorhabditis elegans, GI17533971, Length=205, Percent_Identity=28.2926829268293, Blast_Score=70, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI71992285, Length=219, Percent_Identity=26.4840182648402, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI193202349, Length=223, Percent_Identity=27.8026905829596, Blast_Score=67, Evalue=6e-12,
Organism=Caenorhabditis elegans, GI212646699, Length=183, Percent_Identity=28.4153005464481, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI115533608, Length=193, Percent_Identity=27.979274611399, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17565938, Length=226, Percent_Identity=25.2212389380531, Blast_Score=64, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17567269, Length=227, Percent_Identity=25.9911894273128, Blast_Score=64, Evalue=7e-11,
Organism=Saccharomyces cerevisiae, GI6323959, Length=222, Percent_Identity=23.4234234234234, Blast_Score=69, Evalue=7e-13,
Organism=Saccharomyces cerevisiae, GI6324985, Length=229, Percent_Identity=26.2008733624454, Blast_Score=65, Evalue=9e-12,
Organism=Saccharomyces cerevisiae, GI6322640, Length=215, Percent_Identity=28.8372093023256, Blast_Score=62, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24641565, Length=226, Percent_Identity=25.6637168141593, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24666092, Length=185, Percent_Identity=27.027027027027, Blast_Score=71, Evalue=7e-13,
Organism=Drosophila melanogaster, GI45551501, Length=218, Percent_Identity=29.8165137614679, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI45551502, Length=218, Percent_Identity=29.8165137614679, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21357851, Length=218, Percent_Identity=29.8165137614679, Blast_Score=69, Evalue=2e-12,
Organism=Drosophila melanogaster, GI28574150, Length=171, Percent_Identity=26.9005847953216, Blast_Score=68, Evalue=6e-12,
Organism=Drosophila melanogaster, GI116007328, Length=171, Percent_Identity=26.9005847953216, Blast_Score=67, Evalue=7e-12,
Organism=Drosophila melanogaster, GI85726357, Length=224, Percent_Identity=23.6607142857143, Blast_Score=66, Evalue=2e-11,
Organism=Drosophila melanogaster, GI21357907, Length=226, Percent_Identity=27.4336283185841, Blast_Score=65, Evalue=4e-11,
Organism=Drosophila melanogaster, GI221500419, Length=206, Percent_Identity=23.7864077669903, Blast_Score=64, Evalue=7e-11,
Organism=Drosophila melanogaster, GI24582014, Length=218, Percent_Identity=27.5229357798165, Blast_Score=64, Evalue=9e-11,
Organism=Drosophila melanogaster, GI24582012, Length=218, Percent_Identity=27.5229357798165, Blast_Score=64, Evalue=9e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 25119; Mature: 24988

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: PS00211 ABC_TRANSPORTER_1 ; PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGSILEFQNVGYWYKNQDQPLFEDISIQFSQGLLYTIVGTSGSGKTTFLSLAGGLDAPKE
CCCCCCCCCCCCEECCCCCCCHHHHEEEECCCEEEEEEECCCCCCEEEEEEECCCCCCCC
GNILYKGENISKIGLTSFRNQYVSIVFQSYNLLPYMTALQNITSAMEITGSQVKNKEQYA
CCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHH
LEMLEKVGIGEKQARQKVLTLSGGQQQRVSIIRAFCCDTDLIVADEPTGNLDEDTSKDIV
HHHHHHCCCCHHHHHHEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHH
RLFQNLAHQENKCVIMVTHDEQIAKVSDVNITLSRGGFTVKKRISAG
HHHHHHHCCCCCEEEEEECCCHHEEEECCEEEEECCCEEEEEECCCC
>Mature Secondary Structure 
GSILEFQNVGYWYKNQDQPLFEDISIQFSQGLLYTIVGTSGSGKTTFLSLAGGLDAPKE
CCCCCCCCCCCEECCCCCCCHHHHEEEECCCEEEEEEECCCCCCEEEEEEECCCCCCCC
GNILYKGENISKIGLTSFRNQYVSIVFQSYNLLPYMTALQNITSAMEITGSQVKNKEQYA
CCEEEECCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCHHHCCHHHHH
LEMLEKVGIGEKQARQKVLTLSGGQQQRVSIIRAFCCDTDLIVADEPTGNLDEDTSKDIV
HHHHHHCCCCHHHHHHEEEEECCCCHHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHH
RLFQNLAHQENKCVIMVTHDEQIAKVSDVNITLSRGGFTVKKRISAG
HHHHHHHCCCCCEEEEEECCCHHEEEECCEEEEECCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]