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The map label for this gene is yczE [H]

Identifier: 52784232

GI number: 52784232

Start: 409794

End: 410456

Strand: Reverse

Name: yczE [H]

Synonym: BLi00410

Alternate gene names: 52784232

Gene position: 410456-409794 (Counterclockwise)

Preceding gene: 52784238

Following gene: 52784229

Centisome position: 9.72

GC content: 47.96

Gene sequence:

>663_bases
TTGAAGCGGGAACTTGTTTTGCGCTGGCTTTTTTATTTTGTCGGATTGATTGTTTTGTCTTTCGGGGTTTCTCTTACGAT
TGAAGGGAAAGTGCTCGGCATCGGTCCTTGGGATGCGTTTCACTACGGGCTGTATATGCTTTTGGGCCTTACGGTCGGCC
AATGGGCGATTATTGTCGGGGCGGTCATCGTAGGTTTAACGTCCTTATTTACAAAAGCATGGCCGAAAATCGGCGCCGTG
CTCAATATGCTGTTAATCGGTATTTTTATAGATTTCTTTACTTATATTCTTCCAGACCCGGAAACGTATATTTCAAGCAC
TGTCGTATTCGTGATCGGCGTTATTTTTATCGGTTACGGAGTCGGCATTTATGTATCGGCCGATCTCGGTGCGGGTCCGC
GTGACTCCCTGATGCTTTTGATTTCCGAGAAAACGGGCTGGAACGTTCAGTGGGTCCGAAACGGAATGGAGCTGACGATT
TTATTGATCGGCTGGCTGCTCGGCGGGCCGATCGGCATCGGTACTGTTTTAACCGCCATTTTAACCGGCCTGATTTTGCG
GTTTTCTTTGCCGCAGTCCAAACAGCTTTTAAAAGCAGCAATGGCAGGAAGGCGCATCAGAGCTGCCAAGCCTGTACATA
TGTCGCTGAAAAAAAACGGATGA

Upstream 100 bases:

>100_bases
GTACAAGTATTACACAAAATAAAACATTTTTTGGATATCACCCCACTGAAGAATATGATACAATGACAATTGATTGTTTT
TTTGAAAAGAGGGGAATCCA

Downstream 100 bases:

>100_bases
GCGTTTCATCCGTTTTTCTAGTTCAGGATTATTTCTGCTTACCACCGGTATCCAAATTTCGGTGATATGATCTTGCGCCA
TAATATCCCCGTCCTCAGGA

Product: YczE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 220; Mature: 220

Protein sequence:

>220_residues
MKRELVLRWLFYFVGLIVLSFGVSLTIEGKVLGIGPWDAFHYGLYMLLGLTVGQWAIIVGAVIVGLTSLFTKAWPKIGAV
LNMLLIGIFIDFFTYILPDPETYISSTVVFVIGVIFIGYGVGIYVSADLGAGPRDSLMLLISEKTGWNVQWVRNGMELTI
LLIGWLLGGPIGIGTVLTAILTGLILRFSLPQSKQLLKAAMAGRRIRAAKPVHMSLKKNG

Sequences:

>Translated_220_residues
MKRELVLRWLFYFVGLIVLSFGVSLTIEGKVLGIGPWDAFHYGLYMLLGLTVGQWAIIVGAVIVGLTSLFTKAWPKIGAV
LNMLLIGIFIDFFTYILPDPETYISSTVVFVIGVIFIGYGVGIYVSADLGAGPRDSLMLLISEKTGWNVQWVRNGMELTI
LLIGWLLGGPIGIGTVLTAILTGLILRFSLPQSKQLLKAAMAGRRIRAAKPVHMSLKKNG
>Mature_220_residues
MKRELVLRWLFYFVGLIVLSFGVSLTIEGKVLGIGPWDAFHYGLYMLLGLTVGQWAIIVGAVIVGLTSLFTKAWPKIGAV
LNMLLIGIFIDFFTYILPDPETYISSTVVFVIGVIFIGYGVGIYVSADLGAGPRDSLMLLISEKTGWNVQWVRNGMELTI
LLIGWLLGGPIGIGTVLTAILTGLILRFSLPQSKQLLKAAMAGRRIRAAKPVHMSLKKNG

Specific function: Unknown

COG id: COG2364

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003740 [H]

Pfam domain/function: PF02588 DUF161 [H]

EC number: NA

Molecular weight: Translated: 24012; Mature: 24012

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRELVLRWLFYFVGLIVLSFGVSLTIEGKVLGIGPWDAFHYGLYMLLGLTVGQWAIIVG
CCHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
AVIVGLTSLFTKAWPKIGAVLNMLLIGIFIDFFTYILPDPETYISSTVVFVIGVIFIGYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
VGIYVSADLGAGPRDSLMLLISEKTGWNVQWVRNGMELTILLIGWLLGGPIGIGTVLTAI
CEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHH
LTGLILRFSLPQSKQLLKAAMAGRRIRAAKPVHMSLKKNG
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCC
>Mature Secondary Structure
MKRELVLRWLFYFVGLIVLSFGVSLTIEGKVLGIGPWDAFHYGLYMLLGLTVGQWAIIVG
CCHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
AVIVGLTSLFTKAWPKIGAVLNMLLIGIFIDFFTYILPDPETYISSTVVFVIGVIFIGYG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCC
VGIYVSADLGAGPRDSLMLLISEKTGWNVQWVRNGMELTILLIGWLLGGPIGIGTVLTAI
CEEEEEECCCCCCCCCEEEEEECCCCCCHHHHHCCHHHHHHHHHHHHCCCCCHHHHHHHH
LTGLILRFSLPQSKQLLKAAMAGRRIRAAKPVHMSLKKNG
HHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]