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The map label for this gene is padR [H]

Identifier: 52784175

GI number: 52784175

Start: 330197

End: 330760

Strand: Reverse

Name: padR [H]

Synonym: BLi00353

Alternate gene names: 52784175

Gene position: 330760-330197 (Counterclockwise)

Preceding gene: 52784185

Following gene: 52784174

Centisome position: 7.83

GC content: 46.81

Gene sequence:

>564_bases
ATGACAAAAAGAAATCACACGACTTACGCGCTGCTTGGATTGATTACGGCCGGCTACCGAACGGGTTACGAAATGAAACG
AATGATCGACCAAAGTTTGAATCATTTTTGGAAAATCAGCTACGGGCAAATTTATCCCGCACTGCGTCAATTAACGGAAG
CAGGCTGGGCCGCGGCTTCTCCGGCGCTCTCGGACAAAAAGCAGGACAGAAAAGAGTACATGATTACCGCTGAAGGTCAA
AAAGCGCTGCAGAGCTGGCTTGAAGAACCGATCAATGACATCGCTTCAGAAAAAAACGAGTTTTTGCTGAAGCTGTTTTT
CAGCAAGGAAGAATCGCGGGAGAAAACCGCTTTGAAAGTGAAGGAGTACCAACAAAAGCTTGAAGAACGGCTTGAAGCAT
ATAAAGCAATCGAGCAGTCAATTCTTTCGTGCAGCTCCCATTCAAAGGACAGAGAGTACTGGCTTTTCACGTTGGATTAT
GGAAAACGCACCACCTCGGCCGGAATTGAATGGTGTGAGGCCACAATCAATCGGCTGAATGGAAAGGAAGGGACCAATGG
GTAA

Upstream 100 bases:

>100_bases
CAAATTATCGACAACAATAGTAGCGATTGCACGAAGTCAGCGCCTTTGATATGATGTATCTAAAAGATATATATCAAATA
GATATAGAAAGGCGGTTTGT

Downstream 100 bases:

>100_bases
AACGATCATCAACAAGCCTTTTACGGCCGCCCCTGAAGATGAAGTCGTTGTATTTGTGATCGGGATGAGAGTAAACAAGT
GGCATGCTGTTCATAAATGG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 187; Mature: 186

Protein sequence:

>187_residues
MTKRNHTTYALLGLITAGYRTGYEMKRMIDQSLNHFWKISYGQIYPALRQLTEAGWAAASPALSDKKQDRKEYMITAEGQ
KALQSWLEEPINDIASEKNEFLLKLFFSKEESREKTALKVKEYQQKLEERLEAYKAIEQSILSCSSHSKDREYWLFTLDY
GKRTTSAGIEWCEATINRLNGKEGTNG

Sequences:

>Translated_187_residues
MTKRNHTTYALLGLITAGYRTGYEMKRMIDQSLNHFWKISYGQIYPALRQLTEAGWAAASPALSDKKQDRKEYMITAEGQ
KALQSWLEEPINDIASEKNEFLLKLFFSKEESREKTALKVKEYQQKLEERLEAYKAIEQSILSCSSHSKDREYWLFTLDY
GKRTTSAGIEWCEATINRLNGKEGTNG
>Mature_186_residues
TKRNHTTYALLGLITAGYRTGYEMKRMIDQSLNHFWKISYGQIYPALRQLTEAGWAAASPALSDKKQDRKEYMITAEGQK
ALQSWLEEPINDIASEKNEFLLKLFFSKEESREKTALKVKEYQQKLEERLEAYKAIEQSILSCSSHSKDREYWLFTLDYG
KRTTSAGIEWCEATINRLNGKEGTNG

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 21637; Mature: 21505

Theoretical pI: Translated: 8.59; Mature: 8.59

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKRNHTTYALLGLITAGYRTGYEMKRMIDQSLNHFWKISYGQIYPALRQLTEAGWAAAS
CCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCC
PALSDKKQDRKEYMITAEGQKALQSWLEEPINDIASEKNEFLLKLFFSKEESREKTALKV
CCCCCHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KEYQQKLEERLEAYKAIEQSILSCSSHSKDREYWLFTLDYGKRTTSAGIEWCEATINRLN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCC
GKEGTNG
CCCCCCC
>Mature Secondary Structure 
TKRNHTTYALLGLITAGYRTGYEMKRMIDQSLNHFWKISYGQIYPALRQLTEAGWAAAS
CCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHCCCCCC
PALSDKKQDRKEYMITAEGQKALQSWLEEPINDIASEKNEFLLKLFFSKEESREKTALKV
CCCCCHHHHHHHHEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
KEYQQKLEERLEAYKAIEQSILSCSSHSKDREYWLFTLDYGKRTTSAGIEWCEATINRLN
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHCC
GKEGTNG
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]