Click here to switch to the map view.

The map label for this gene is ybgJ [H]

Identifier: 52784097

GI number: 52784097

Start: 247089

End: 248072

Strand: Reverse

Name: ybgJ [H]

Synonym: BLi00274

Alternate gene names: 52784097

Gene position: 248072-247089 (Counterclockwise)

Preceding gene: 52784100

Following gene: 52784096

Centisome position: 5.87

GC content: 49.19

Gene sequence:

>984_bases
ATGAATGAAGTATTGGAAGAACGCTATGACGCCCGCTTCTGGCAATCCCGCCTTGAAGATTTGGTCGAACATTACCGTCC
TTTTTCCTCAAGCGGACGCAACGCCGAATACATTCCCGCTTTAGGAAAAATCGACTCTAACCAGCTCGGCATCTGTGTGA
TCGGCTCTGATCAAACGATGATCAAAGCAGGAAATTCGGACGTATCATTCACACTCCAGAGCATCTCGAAGGTGATCAGC
TTTATCGCAGCGTGTTTGACGAAAGGGATTTCTTACGTATTAGACCGTGTTGATGTAGAACCGACGGGAGACGCGTTCAA
TTCAATCATCCGCCTTGAAATGCACAAGCCGGGAAAGCCGTTTAACCCGATGATCAACGCCGGAGCGCTGACCGTTTCGT
CGATCCTTCCCGGTGAATCGGCACTGGGAAAAATAGAGTCGCTTCATGACGTCATTGAAAAAATGATTGGAAAACGGCTT
GAGATCAATGAGGAAGTCTTTCGGTCAGAGTGGCAGACCGCCCATCGGAACAGAGCATTGGCCCATTATTTAAAGGAAAC
CGGCTTCCTCGAAGCAGACGTTGAAGAAACGCTTGAAGTCTATCTGAAACAATGCTCTATGGAAGGAAGCACTGAAGACA
TCGCCTTGATCGGCATGATTCTTGCAAATGACGGATACCATCCTTTCCGCCGTGAACATGTCATTCCGAAGGATGTCGCG
CGGCTGACAAAAGCTTTAATGCTGACGTGCGGAATGTATAATGCATCAGGAAAATTCGCGGCCTTTGTCGGCATTCCGGC
AAAAAGCGGCGTCTCCGGCGGAATCATGTGCGCGGTGCCCGCCAGCGTGAAAAGAGAACAGCCTTTTCAGCACGGATGCG
GCATCGGCATCTATGGTCCGGCGATTGACGATTACGGAAACAGCATGACGGGCGGAATGCTTTTAAAACATATAGCCCGT
GAATGGGATCTCAGTATTTTTTAA

Upstream 100 bases:

>100_bases
CCTTTGCCTTCTGCCGCCATGCTCAAATCACCGCTTTTAGAGCCTCGTATTTTTTCAGCAAACCTGCAGGCTTTAACAGG
TCAGGATTGGAGGAATTTCG

Downstream 100 bases:

>100_bases
AATTACAAAAAAAGAGGTGAAAGCATGCAGCAATTCCTTCAAGAAGTCATTGGTGTCACAAATGATTTTCTTTGGTCAAA
ACTATTGATTATTATGCTTC

Product: glutaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MNEVLEERYDARFWQSRLEDLVEHYRPFSSSGRNAEYIPALGKIDSNQLGICVIGSDQTMIKAGNSDVSFTLQSISKVIS
FIAACLTKGISYVLDRVDVEPTGDAFNSIIRLEMHKPGKPFNPMINAGALTVSSILPGESALGKIESLHDVIEKMIGKRL
EINEEVFRSEWQTAHRNRALAHYLKETGFLEADVEETLEVYLKQCSMEGSTEDIALIGMILANDGYHPFRREHVIPKDVA
RLTKALMLTCGMYNASGKFAAFVGIPAKSGVSGGIMCAVPASVKREQPFQHGCGIGIYGPAIDDYGNSMTGGMLLKHIAR
EWDLSIF

Sequences:

>Translated_327_residues
MNEVLEERYDARFWQSRLEDLVEHYRPFSSSGRNAEYIPALGKIDSNQLGICVIGSDQTMIKAGNSDVSFTLQSISKVIS
FIAACLTKGISYVLDRVDVEPTGDAFNSIIRLEMHKPGKPFNPMINAGALTVSSILPGESALGKIESLHDVIEKMIGKRL
EINEEVFRSEWQTAHRNRALAHYLKETGFLEADVEETLEVYLKQCSMEGSTEDIALIGMILANDGYHPFRREHVIPKDVA
RLTKALMLTCGMYNASGKFAAFVGIPAKSGVSGGIMCAVPASVKREQPFQHGCGIGIYGPAIDDYGNSMTGGMLLKHIAR
EWDLSIF
>Mature_327_residues
MNEVLEERYDARFWQSRLEDLVEHYRPFSSSGRNAEYIPALGKIDSNQLGICVIGSDQTMIKAGNSDVSFTLQSISKVIS
FIAACLTKGISYVLDRVDVEPTGDAFNSIIRLEMHKPGKPFNPMINAGALTVSSILPGESALGKIESLHDVIEKMIGKRL
EINEEVFRSEWQTAHRNRALAHYLKETGFLEADVEETLEVYLKQCSMEGSTEDIALIGMILANDGYHPFRREHVIPKDVA
RLTKALMLTCGMYNASGKFAAFVGIPAKSGVSGGIMCAVPASVKREQPFQHGCGIGIYGPAIDDYGNSMTGGMLLKHIAR
EWDLSIF

Specific function: Unknown

COG id: COG2066

COG function: function code E; Glutaminase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glutaminase family [H]

Homologues:

Organism=Homo sapiens, GI156104878, Length=302, Percent_Identity=35.0993377483444, Blast_Score=165, Evalue=5e-41,
Organism=Homo sapiens, GI20336214, Length=345, Percent_Identity=31.304347826087, Blast_Score=155, Evalue=6e-38,
Organism=Escherichia coli, GI1787804, Length=311, Percent_Identity=35.6913183279743, Blast_Score=191, Evalue=6e-50,
Organism=Escherichia coli, GI1786693, Length=315, Percent_Identity=33.6507936507937, Blast_Score=189, Evalue=2e-49,
Organism=Caenorhabditis elegans, GI17507019, Length=319, Percent_Identity=32.6018808777429, Blast_Score=164, Evalue=8e-41,
Organism=Caenorhabditis elegans, GI17532727, Length=298, Percent_Identity=30.8724832214765, Blast_Score=152, Evalue=2e-37,
Organism=Caenorhabditis elegans, GI193204073, Length=305, Percent_Identity=31.8032786885246, Blast_Score=149, Evalue=2e-36,
Organism=Caenorhabditis elegans, GI193204075, Length=307, Percent_Identity=31.2703583061889, Blast_Score=146, Evalue=2e-35,
Organism=Drosophila melanogaster, GI24653158, Length=288, Percent_Identity=34.375, Blast_Score=157, Evalue=9e-39,
Organism=Drosophila melanogaster, GI24653164, Length=288, Percent_Identity=34.375, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI116008307, Length=288, Percent_Identity=34.375, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24653162, Length=288, Percent_Identity=34.375, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24653156, Length=288, Percent_Identity=34.375, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI281363239, Length=288, Percent_Identity=34.375, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI281363241, Length=288, Percent_Identity=34.375, Blast_Score=157, Evalue=1e-38,
Organism=Drosophila melanogaster, GI24653166, Length=288, Percent_Identity=34.375, Blast_Score=157, Evalue=1e-38,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012338
- InterPro:   IPR015868 [H]

Pfam domain/function: PF04960 Glutaminase [H]

EC number: =3.5.1.2 [H]

Molecular weight: Translated: 36041; Mature: 36041

Theoretical pI: Translated: 5.84; Mature: 5.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.5 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEVLEERYDARFWQSRLEDLVEHYRPFSSSGRNAEYIPALGKIDSNQLGICVIGSDQTM
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE
IKAGNSDVSFTLQSISKVISFIAACLTKGISYVLDRVDVEPTGDAFNSIIRLEMHKPGKP
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEECCCCCC
FNPMINAGALTVSSILPGESALGKIESLHDVIEKMIGKRLEINEEVFRSEWQTAHRNRAL
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AHYLKETGFLEADVEETLEVYLKQCSMEGSTEDIALIGMILANDGYHPFRREHVIPKDVA
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHH
RLTKALMLTCGMYNASGKFAAFVGIPAKSGVSGGIMCAVPASVKREQPFQHGCGIGIYGP
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEECCCHHHHCCCHHHCCCCEECCC
AIDDYGNSMTGGMLLKHIAREWDLSIF
CHHHCCCCCHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MNEVLEERYDARFWQSRLEDLVEHYRPFSSSGRNAEYIPALGKIDSNQLGICVIGSDQTM
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCEE
IKAGNSDVSFTLQSISKVISFIAACLTKGISYVLDRVDVEPTGDAFNSIIRLEMHKPGKP
EEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHEEEEEECCCCCC
FNPMINAGALTVSSILPGESALGKIESLHDVIEKMIGKRLEINEEVFRSEWQTAHRNRAL
CCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHH
AHYLKETGFLEADVEETLEVYLKQCSMEGSTEDIALIGMILANDGYHPFRREHVIPKDVA
HHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCCCCCHHHCCCCHHHHH
RLTKALMLTCGMYNASGKFAAFVGIPAKSGVSGGIMCAVPASVKREQPFQHGCGIGIYGP
HHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCEEEECCCHHHHCCCHHHCCCCEECCC
AIDDYGNSMTGGMLLKHIAREWDLSIF
CHHHCCCCCHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]