Click here to switch to the map view.

The map label for this gene is ybfF [H]

Identifier: 52784073

GI number: 52784073

Start: 224849

End: 225295

Strand: Reverse

Name: ybfF [H]

Synonym: BLi00248

Alternate gene names: 52784073

Gene position: 225295-224849 (Counterclockwise)

Preceding gene: 52784074

Following gene: 52784072

Centisome position: 5.34

GC content: 35.79

Gene sequence:

>447_bases
ATGAGAAACGAAAAACAATTATTTCAAAAAGCTGAACATACAGCCAAACTTCTTGAGTCTCACAAAAGTGACGAAGAGCT
GCTTACATACCTTGCAAATCAAGAATCTGTTACATTAAATCAGCTAAAAATCTATTTTTCAAATCCAAGTTTTACATTAA
CGTATTTGATTAAAGGGATTTTTTTTAGCAGTATGACTGCTGTCATTATGGCGGCCTTTTTATCTGGTCAGATCTCCTCC
CTCAACCATGGTCTTTCAAGGCTATTTTCATTCTTCTTCATGTTCTATCTGATCTTCTCTTTTCTTTGGATCGTCAAGAT
GCTGATCTCCTCGCGAAAAGGACCGATGCAAACAATCCTGCACTTCCAAAAAAGAGCGGAATATTCCAGAATCACGGGTA
TGATTGATTTCATTTTAGATGAACGCTTTAAAAAGGAATTCAATTAG

Upstream 100 bases:

>100_bases
AATGATTGATTATGTTTTACAACAAAAATACAAAAAGGCATTAAAAAATATACCGAACCAATAAAATCTCATGTTTTTTA
TGAATAGGAGTGACAATCCA

Downstream 100 bases:

>100_bases
AAAGCAGAGGAACATTCACCTCTGCTTTGATTCTCTATCATTCAAACTAAATAAGAAGGAGACCAAGACATGCAAACAGA
CAAACAACTATTCGAAGAAA

Product: YbfF

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 148; Mature: 148

Protein sequence:

>148_residues
MRNEKQLFQKAEHTAKLLESHKSDEELLTYLANQESVTLNQLKIYFSNPSFTLTYLIKGIFFSSMTAVIMAAFLSGQISS
LNHGLSRLFSFFFMFYLIFSFLWIVKMLISSRKGPMQTILHFQKRAEYSRITGMIDFILDERFKKEFN

Sequences:

>Translated_148_residues
MRNEKQLFQKAEHTAKLLESHKSDEELLTYLANQESVTLNQLKIYFSNPSFTLTYLIKGIFFSSMTAVIMAAFLSGQISS
LNHGLSRLFSFFFMFYLIFSFLWIVKMLISSRKGPMQTILHFQKRAEYSRITGMIDFILDERFKKEFN
>Mature_148_residues
MRNEKQLFQKAEHTAKLLESHKSDEELLTYLANQESVTLNQLKIYFSNPSFTLTYLIKGIFFSSMTAVIMAAFLSGQISS
LNHGLSRLFSFFFMFYLIFSFLWIVKMLISSRKGPMQTILHFQKRAEYSRITGMIDFILDERFKKEFN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17410; Mature: 17410

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRNEKQLFQKAEHTAKLLESHKSDEELLTYLANQESVTLNQLKIYFSNPSFTLTYLIKGI
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEHHHHEEEECCCCHHHHHHHHHH
FFSSMTAVIMAAFLSGQISSLNHGLSRLFSFFFMFYLIFSFLWIVKMLISSRKGPMQTIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
HFQKRAEYSRITGMIDFILDERFKKEFN
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRNEKQLFQKAEHTAKLLESHKSDEELLTYLANQESVTLNQLKIYFSNPSFTLTYLIKGI
CCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCCEEHHHHEEEECCCCHHHHHHHHHH
FFSSMTAVIMAAFLSGQISSLNHGLSRLFSFFFMFYLIFSFLWIVKMLISSRKGPMQTIL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
HFQKRAEYSRITGMIDFILDERFKKEFN
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]