BacMap

Definition	Bacillus licheniformis ATCC 14580, complete genome.
Accession	NC_006322
Length	4,222,645

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The map label for this gene is ytrB [H]

Identifier: 52784035

GI number: 52784035

Start: 186469

End: 187353

Strand: Reverse

Name: ytrB [H]

Synonym: BLi00207

Alternate gene names: 52784035

Gene position: 187353-186469 (Counterclockwise)

Preceding gene: 52784036

Following gene: 52784034

Centisome position: 4.44

GC content: 37.63

Gene sequence:

>885_bases
ATGATGGACAATGTAATTGAACTCCGGCATGTTCATAAATCGTTCGATGGTTTCCAGCTCAAGGACTTTTCGATGAGCGT
AAAAAAAGGTTTTATCACCGGATTTATCGGCGGAAATGGCGTGGGAAAATCGACAACGATTAAACTGATCATGAACTTAT
TGCAGCCTGACAGCGGAACAATTACGGTATTTGGCATGAATTACAAGGAGCATGAGAAAGAAATCAAACAACGTATTGGC
TTTGTATTTGATTCCAACATATTTTATGAACATTTAACGTTAGCTAAAATGAAAGATATTGTGAAAAGATCCTATGTCAA
TTGGGATGAACAAGTATTTAATGATTATGTGAACACATTTAACTTGCCGCTCACAAAAAAAATCAAGACGTTCTCAAAAG
GGATGATAATGAAAGCATCATTAACCGTTGCTTTGTCCCATCATGCGGAATTAATTATTATGGATGAACCGACGTCCGGA
CTCGACCCGATTTTCCGCCGGGAGCTGTTGGAAATCTTGCATCAGCTCATGCAAGATGGGGATAAGACGATCTTTTTTTC
GACTCATATTACAACTGATTTAGATAAGATTGCAGATTATATCACGTTCATTGATAAAGGAGAGCACATCTTTACAAAGG
ACTTTTACGAAATTGAGGAACAATATGCAATTGTAAAAGGCGGAATGGAGTTGTTAGACCGGGAGACCGAACAGGAATTT
ATAGCGGTTCGAAAATCAACTCATGGATTTGAAGCATTGACTGCGAATAAATCACGAACAGAAAAAATCTTTGGGGACAT
GGCGTTAATAGAAAAACCGACCCTTGAAGATATTATGTTCTATACGAAGAAAGGAGCCAAAGAACATGTTCAACTTAATT
CTTAA

Upstream 100 bases:

>100_bases
TCGAAGAGCAATTGTCGGCAGTGATAAAAAACAGCAAAGACATAGGCGTTACCCTTACAGAATTAAAAGACTTGCTTACC
ATTTTATATCAGGAGGAAGA

Downstream 100 bases:

>100_bases
AGATATTATCTTGCAGAAAAAAACATTGGCGGCTTCGTTTTTGGTATTATGTGTTTATTTAATGTTAGATATTTCTCCAA
TCTGGGTTGGGGTTGTATTT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 294

Protein sequence:

>294_residues
MMDNVIELRHVHKSFDGFQLKDFSMSVKKGFITGFIGGNGVGKSTTIKLIMNLLQPDSGTITVFGMNYKEHEKEIKQRIG
FVFDSNIFYEHLTLAKMKDIVKRSYVNWDEQVFNDYVNTFNLPLTKKIKTFSKGMIMKASLTVALSHHAELIIMDEPTSG
LDPIFRRELLEILHQLMQDGDKTIFFSTHITTDLDKIADYITFIDKGEHIFTKDFYEIEEQYAIVKGGMELLDRETEQEF
IAVRKSTHGFEALTANKSRTEKIFGDMALIEKPTLEDIMFYTKKGAKEHVQLNS

Sequences:

>Translated_294_residues
MMDNVIELRHVHKSFDGFQLKDFSMSVKKGFITGFIGGNGVGKSTTIKLIMNLLQPDSGTITVFGMNYKEHEKEIKQRIG
FVFDSNIFYEHLTLAKMKDIVKRSYVNWDEQVFNDYVNTFNLPLTKKIKTFSKGMIMKASLTVALSHHAELIIMDEPTSG
LDPIFRRELLEILHQLMQDGDKTIFFSTHITTDLDKIADYITFIDKGEHIFTKDFYEIEEQYAIVKGGMELLDRETEQEF
IAVRKSTHGFEALTANKSRTEKIFGDMALIEKPTLEDIMFYTKKGAKEHVQLNS
>Mature_294_residues
MMDNVIELRHVHKSFDGFQLKDFSMSVKKGFITGFIGGNGVGKSTTIKLIMNLLQPDSGTITVFGMNYKEHEKEIKQRIG
FVFDSNIFYEHLTLAKMKDIVKRSYVNWDEQVFNDYVNTFNLPLTKKIKTFSKGMIMKASLTVALSHHAELIIMDEPTSG
LDPIFRRELLEILHQLMQDGDKTIFFSTHITTDLDKIADYITFIDKGEHIFTKDFYEIEEQYAIVKGGMELLDRETEQEF
IAVRKSTHGFEALTANKSRTEKIFGDMALIEKPTLEDIMFYTKKGAKEHVQLNS

Specific function: Part of the ABC transporter complex YtrBCDEF that plays a role in acetoin utilization during stationary phase and sporulation [H]

COG id: COG1131

COG function: function code V; ABC-type multidrug transport system, ATPase component

Gene ontology:

Cell location: Cell membrane; Peripheral membrane protein; Cytoplasmic side (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI116734710, Length=296, Percent_Identity=26.6891891891892, Blast_Score=105, Evalue=3e-23,
Organism=Homo sapiens, GI45446740, Length=215, Percent_Identity=27.906976744186, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI47078218, Length=215, Percent_Identity=27.906976744186, Blast_Score=99, Evalue=5e-21,
Organism=Homo sapiens, GI21536376, Length=193, Percent_Identity=31.0880829015544, Blast_Score=97, Evalue=1e-20,
Organism=Homo sapiens, GI105990541, Length=183, Percent_Identity=32.2404371584699, Blast_Score=95, Evalue=7e-20,
Organism=Homo sapiens, GI30795238, Length=196, Percent_Identity=27.0408163265306, Blast_Score=89, Evalue=5e-18,
Organism=Homo sapiens, GI27881501, Length=194, Percent_Identity=27.319587628866, Blast_Score=87, Evalue=2e-17,
Organism=Homo sapiens, GI31657092, Length=211, Percent_Identity=27.4881516587678, Blast_Score=86, Evalue=3e-17,
Organism=Homo sapiens, GI150417984, Length=214, Percent_Identity=25.2336448598131, Blast_Score=84, Evalue=2e-16,
Organism=Homo sapiens, GI153792144, Length=226, Percent_Identity=28.3185840707965, Blast_Score=79, Evalue=4e-15,
Organism=Homo sapiens, GI27262624, Length=205, Percent_Identity=26.8292682926829, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI27262626, Length=205, Percent_Identity=26.8292682926829, Blast_Score=76, Evalue=3e-14,
Organism=Homo sapiens, GI27436953, Length=197, Percent_Identity=20.8121827411168, Blast_Score=75, Evalue=7e-14,
Organism=Homo sapiens, GI27477115, Length=193, Percent_Identity=22.7979274611399, Blast_Score=74, Evalue=1e-13,
Organism=Homo sapiens, GI6005701, Length=193, Percent_Identity=22.279792746114, Blast_Score=72, Evalue=4e-13,
Organism=Homo sapiens, GI171184400, Length=223, Percent_Identity=24.2152466367713, Blast_Score=68, Evalue=1e-11,
Organism=Escherichia coli, GI87081782, Length=223, Percent_Identity=27.8026905829596, Blast_Score=99, Evalue=3e-22,
Organism=Escherichia coli, GI48994943, Length=250, Percent_Identity=27.6, Blast_Score=96, Evalue=3e-21,
Organism=Escherichia coli, GI1788225, Length=222, Percent_Identity=28.3783783783784, Blast_Score=85, Evalue=6e-18,
Organism=Escherichia coli, GI1788450, Length=214, Percent_Identity=27.1028037383178, Blast_Score=82, Evalue=3e-17,
Organism=Escherichia coli, GI1786319, Length=227, Percent_Identity=27.7533039647577, Blast_Score=81, Evalue=8e-17,
Organism=Escherichia coli, GI1787029, Length=215, Percent_Identity=28.3720930232558, Blast_Score=81, Evalue=1e-16,
Organism=Escherichia coli, GI1788540, Length=188, Percent_Identity=29.7872340425532, Blast_Score=79, Evalue=2e-16,
Organism=Escherichia coli, GI1789672, Length=216, Percent_Identity=28.2407407407407, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI87081709, Length=235, Percent_Identity=25.9574468085106, Blast_Score=77, Evalue=1e-15,
Organism=Escherichia coli, GI1787759, Length=236, Percent_Identity=25, Blast_Score=74, Evalue=1e-14,
Organism=Escherichia coli, GI1789032, Length=208, Percent_Identity=26.9230769230769, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI2367384, Length=226, Percent_Identity=30.9734513274336, Blast_Score=73, Evalue=2e-14,
Organism=Escherichia coli, GI87081791, Length=226, Percent_Identity=24.7787610619469, Blast_Score=72, Evalue=3e-14,
Organism=Escherichia coli, GI1786398, Length=215, Percent_Identity=27.4418604651163, Blast_Score=72, Evalue=5e-14,
Organism=Escherichia coli, GI1788761, Length=214, Percent_Identity=25.2336448598131, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1786872, Length=222, Percent_Identity=30.6306306306306, Blast_Score=71, Evalue=9e-14,
Organism=Escherichia coli, GI1790525, Length=222, Percent_Identity=25.6756756756757, Blast_Score=70, Evalue=1e-13,
Organism=Escherichia coli, GI1790739, Length=209, Percent_Identity=24.8803827751196, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1790467, Length=211, Percent_Identity=25.1184834123223, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI1788210, Length=219, Percent_Identity=23.7442922374429, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI48995001, Length=229, Percent_Identity=25.3275109170306, Blast_Score=68, Evalue=6e-13,
Organism=Escherichia coli, GI1788472, Length=227, Percent_Identity=24.2290748898678, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI1786698, Length=209, Percent_Identity=25.3588516746411, Blast_Score=66, Evalue=2e-12,
Organism=Escherichia coli, GI1788165, Length=193, Percent_Identity=26.9430051813472, Blast_Score=64, Evalue=8e-12,
Organism=Escherichia coli, GI48994997, Length=224, Percent_Identity=25.4464285714286, Blast_Score=64, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17510237, Length=226, Percent_Identity=27.8761061946903, Blast_Score=88, Evalue=5e-18,
Organism=Caenorhabditis elegans, GI71983523, Length=193, Percent_Identity=24.3523316062176, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71983516, Length=193, Percent_Identity=24.3523316062176, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI71983510, Length=193, Percent_Identity=24.3523316062176, Blast_Score=81, Evalue=6e-16,
Organism=Caenorhabditis elegans, GI115533608, Length=212, Percent_Identity=24.0566037735849, Blast_Score=79, Evalue=3e-15,
Organism=Caenorhabditis elegans, GI17565586, Length=214, Percent_Identity=23.8317757009346, Blast_Score=73, Evalue=1e-13,
Organism=Drosophila melanogaster, GI221512771, Length=213, Percent_Identity=30.0469483568075, Blast_Score=96, Evalue=4e-20,
Organism=Drosophila melanogaster, GI24643674, Length=228, Percent_Identity=25.8771929824561, Blast_Score=91, Evalue=9e-19,
Organism=Drosophila melanogaster, GI24666092, Length=209, Percent_Identity=26.3157894736842, Blast_Score=89, Evalue=3e-18,
Organism=Drosophila melanogaster, GI281362751, Length=204, Percent_Identity=27.4509803921569, Blast_Score=85, Evalue=7e-17,
Organism=Drosophila melanogaster, GI24650853, Length=204, Percent_Identity=27.4509803921569, Blast_Score=84, Evalue=1e-16,
Organism=Drosophila melanogaster, GI24650855, Length=203, Percent_Identity=27.5862068965517, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI28574150, Length=199, Percent_Identity=28.643216080402, Blast_Score=83, Evalue=2e-16,
Organism=Drosophila melanogaster, GI116007328, Length=199, Percent_Identity=28.643216080402, Blast_Score=82, Evalue=3e-16,
Organism=Drosophila melanogaster, GI24648314, Length=210, Percent_Identity=29.0476190476191, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI85725262, Length=227, Percent_Identity=27.3127753303965, Blast_Score=81, Evalue=9e-16,
Organism=Drosophila melanogaster, GI24582014, Length=194, Percent_Identity=27.319587628866, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI24582012, Length=194, Percent_Identity=27.319587628866, Blast_Score=80, Evalue=2e-15,
Organism=Drosophila melanogaster, GI28573571, Length=213, Percent_Identity=22.5352112676056, Blast_Score=72, Evalue=6e-13,
Organism=Drosophila melanogaster, GI28573573, Length=208, Percent_Identity=22.5961538461538, Blast_Score=67, Evalue=1e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 33864; Mature: 33864

Theoretical pI: Translated: 6.45; Mature: 6.45

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.4 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMDNVIELRHVHKSFDGFQLKDFSMSVKKGFITGFIGGNGVGKSTTIKLIMNLLQPDSGT
CCCHHHHHHHHHHCCCCCEEEHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCCE
ITVFGMNYKEHEKEIKQRIGFVFDSNIFYEHLTLAKMKDIVKRSYVNWDEQVFNDYVNTF
EEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
NLPLTKKIKTFSKGMIMKASLTVALSHHAELIIMDEPTSGLDPIFRRELLEILHQLMQDG
CCCHHHHHHHHHCCEEEEEHEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
DKTIFFSTHITTDLDKIADYITFIDKGEHIFTKDFYEIEEQYAIVKGGMELLDRETEQEF
CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IAVRKSTHGFEALTANKSRTEKIFGDMALIEKPTLEDIMFYTKKGAKEHVQLNS
HHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECCC
>Mature Secondary Structure
MMDNVIELRHVHKSFDGFQLKDFSMSVKKGFITGFIGGNGVGKSTTIKLIMNLLQPDSGT
CCCHHHHHHHHHHCCCCCEEEHHHHHHHHCCEEEEECCCCCCCHHHHHHHHHHHCCCCCE
ITVFGMNYKEHEKEIKQRIGFVFDSNIFYEHLTLAKMKDIVKRSYVNWDEQVFNDYVNTF
EEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHC
NLPLTKKIKTFSKGMIMKASLTVALSHHAELIIMDEPTSGLDPIFRRELLEILHQLMQDG
CCCHHHHHHHHHCCEEEEEHEEEEEECCCEEEEEECCCCCCCHHHHHHHHHHHHHHHHCC
DKTIFFSTHITTDLDKIADYITFIDKGEHIFTKDFYEIEEQYAIVKGGMELLDRETEQEF
CCEEEEEECCCCCHHHHHHHHHHHCCCCEEEHHHHHHHHHHHHHHHCCHHHHHHHHHHHH
IAVRKSTHGFEALTANKSRTEKIFGDMALIEKPTLEDIMFYTKKGAKEHVQLNS
HHHHHCCCCCCEEECCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9387221; 9384377 [H]