Definition | Bacillus licheniformis ATCC 14580, complete genome. |
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Accession | NC_006322 |
Length | 4,222,645 |
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The map label for this gene is gltX
Identifier: 52783948
GI number: 52783948
Start: 109801
End: 111258
Strand: Direct
Name: gltX
Synonym: BLi00110
Alternate gene names: 52783948
Gene position: 109801-111258 (Clockwise)
Preceding gene: 52783947
Following gene: 52783949
Centisome position: 2.6
GC content: 46.36
Gene sequence:
>1458_bases ATGGGAAACGAAGTTCGGGTTCGTTATGCGCCGAGCCCAACAGGCCATTTACATATCGGAAATGCCAGAACCGCTCTTTT TAATTATTTGTTTGCCCGGAGCCAAGGCGGAAAATTCATCATCCGCATTGAAGATACGGACCGCAAGCGCAACATTGAAG GCGGGGAGCAAAGCCAGCTGAACTATTTAAAATGGCTGGGCATCGACTGGGATGAAAGCGTGGATGTCGGAGGAGAATAC GGACCATACCGCCAATCCGAAAGAAACGACATTTACAAAACATATTACGAGGAGCTTCTTGAAAAAGGGCTAGCCTACAA ATGCTACTGCACGGAAGAAGAGCTTGAGAAAGAGCGTGAGGAACAGGCTGCCCGCGGAGAAATGCCGCGCTACTCCGGCA AGTGCCGCAATTTAACAAAAGAAGAGCAGGAAAAGCTCGAAGCTGAAGGAAGACAGCCGAGCATCCGCTTTAAAGTGCCT CAAGGTGAAGTCATCCGCTTTGATGACATCGTCAAAGGAGAAATTTCTTTTGAAACAGACGGAATCGGCGACTTCGTCAT CGTGAAGAAAGACGGAACGCCTACTTACAACTTTGCCGTAGCGGTCGATGACTATTTAATGAAAATGACGCATGTCCTGC GCGGCGAAGACCACATTTCCAATACGCCAAAGCAGATCATGATTTACAACGCCCTTGGCTGGGATATCCCGGCATTTGGA CATATGACATTAATCGTCAATGAAAGCCGCAAAAAACTGAGCAAACGTGATGAGTCCATCATTCAGTTTATCGAGCAGTA CGAAGAGCTCGGCTATTTGCCGGAAGCATTGTTTAACTTCATCACTCTTCTAGGCTGGTCGCCGGTCGGAGAAGAAGAAC TGTTTACAAAAGAACAGTTTATTGAGATATTTGATGTAAACCGTTTGTCAAAATCACCAGCGGTGTTTGATACGCATAAA CTGAAATGGGTCAACAACCAGTATGTGAAAAAACTTGATCTTGATCAGGTCATCGAATTGACCGTGCCGCATTTGCAAAA AGCGGGCAAGGTTTCAGAAGAGCTTTCAGGCAGCGAACAGGAATGGGTGCGCAAGCTGATTTCCCTATATCAGGAACAGC TGAGCTACGGCGCTGAAATCGTCGAGTTAACAGAGTTGTTCTTTAAAGACGATATCCAGTATAATCGTGAAGCAAGAACA GTTTTAGAAGAAGAGCAGGTTCCGGAAGTGCTTCGCGTATTTGCCGAAAAGCTTGAGCAGCTTGACTCGTTTACGGCAGA TGAGATCAAGGCATCCATCAAAGCCGTTCAAAAAGAAACAGGACATAAAGGGAAAAAGCTGTTTATGCCGATCCGCGTAG CGACGACAGGCCAGACCCACGGTCCTGAACTGCCTCAGTCCATTGAATTATTGGGGAAAGACACCGTTTTAAAACGGCTG CATAACATTATTCAATAA
Upstream 100 bases:
>100_bases TCTGCTCCAAAAGGTATAATTCATTTTGAAGACAGGTTCATTTGATGATAGAATAGGAAATAAATTTGAACTCTGCTAGA GACGAAAGGAAGTTAGACAG
Downstream 100 bases:
>100_bases GATAAATCGTTGACAGGGATAAGTATAAAGCCAGGGCCTTTAAAGAGAGAGTCTTCATCGGCTGGAAAAGACTTAAGCGC CGGGCTTTAGAAATGCACCT
Product: glutamyl-tRNA synthetase
Products: NA
Alternate protein names: Glutamate--tRNA ligase; GluRS
Number of amino acids: Translated: 485; Mature: 484
Protein sequence:
>485_residues MGNEVRVRYAPSPTGHLHIGNARTALFNYLFARSQGGKFIIRIEDTDRKRNIEGGEQSQLNYLKWLGIDWDESVDVGGEY GPYRQSERNDIYKTYYEELLEKGLAYKCYCTEEELEKEREEQAARGEMPRYSGKCRNLTKEEQEKLEAEGRQPSIRFKVP QGEVIRFDDIVKGEISFETDGIGDFVIVKKDGTPTYNFAVAVDDYLMKMTHVLRGEDHISNTPKQIMIYNALGWDIPAFG HMTLIVNESRKKLSKRDESIIQFIEQYEELGYLPEALFNFITLLGWSPVGEEELFTKEQFIEIFDVNRLSKSPAVFDTHK LKWVNNQYVKKLDLDQVIELTVPHLQKAGKVSEELSGSEQEWVRKLISLYQEQLSYGAEIVELTELFFKDDIQYNREART VLEEEQVPEVLRVFAEKLEQLDSFTADEIKASIKAVQKETGHKGKKLFMPIRVATTGQTHGPELPQSIELLGKDTVLKRL HNIIQ
Sequences:
>Translated_485_residues MGNEVRVRYAPSPTGHLHIGNARTALFNYLFARSQGGKFIIRIEDTDRKRNIEGGEQSQLNYLKWLGIDWDESVDVGGEY GPYRQSERNDIYKTYYEELLEKGLAYKCYCTEEELEKEREEQAARGEMPRYSGKCRNLTKEEQEKLEAEGRQPSIRFKVP QGEVIRFDDIVKGEISFETDGIGDFVIVKKDGTPTYNFAVAVDDYLMKMTHVLRGEDHISNTPKQIMIYNALGWDIPAFG HMTLIVNESRKKLSKRDESIIQFIEQYEELGYLPEALFNFITLLGWSPVGEEELFTKEQFIEIFDVNRLSKSPAVFDTHK LKWVNNQYVKKLDLDQVIELTVPHLQKAGKVSEELSGSEQEWVRKLISLYQEQLSYGAEIVELTELFFKDDIQYNREART VLEEEQVPEVLRVFAEKLEQLDSFTADEIKASIKAVQKETGHKGKKLFMPIRVATTGQTHGPELPQSIELLGKDTVLKRL HNIIQ >Mature_484_residues GNEVRVRYAPSPTGHLHIGNARTALFNYLFARSQGGKFIIRIEDTDRKRNIEGGEQSQLNYLKWLGIDWDESVDVGGEYG PYRQSERNDIYKTYYEELLEKGLAYKCYCTEEELEKEREEQAARGEMPRYSGKCRNLTKEEQEKLEAEGRQPSIRFKVPQ GEVIRFDDIVKGEISFETDGIGDFVIVKKDGTPTYNFAVAVDDYLMKMTHVLRGEDHISNTPKQIMIYNALGWDIPAFGH MTLIVNESRKKLSKRDESIIQFIEQYEELGYLPEALFNFITLLGWSPVGEEELFTKEQFIEIFDVNRLSKSPAVFDTHKL KWVNNQYVKKLDLDQVIELTVPHLQKAGKVSEELSGSEQEWVRKLISLYQEQLSYGAEIVELTELFFKDDIQYNREARTV LEEEQVPEVLRVFAEKLEQLDSFTADEIKASIKAVQKETGHKGKKLFMPIRVATTGQTHGPELPQSIELLGKDTVLKRLH NIIQ
Specific function: Catalyzes the attachment of glutamate to tRNA(Glu) in a two-step reaction:glutamate is first activated by ATP to form Glu-AMP and then transferred to the acceptor end of tRNA(Glu)
COG id: COG0008
COG function: function code J; Glutamyl- and glutaminyl-tRNA synthetases
Gene ontology:
Cell location: Cytoplasm
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the class-I aminoacyl-tRNA synthetase family
Homologues:
Organism=Homo sapiens, GI134288884, Length=501, Percent_Identity=33.1337325349301, Blast_Score=273, Evalue=2e-73, Organism=Homo sapiens, GI4826960, Length=300, Percent_Identity=24, Blast_Score=72, Evalue=1e-12, Organism=Escherichia coli, GI1788743, Length=481, Percent_Identity=37.8378378378378, Blast_Score=357, Evalue=1e-100, Organism=Escherichia coli, GI226510925, Length=253, Percent_Identity=34.3873517786561, Blast_Score=145, Evalue=6e-36, Organism=Escherichia coli, GI1786895, Length=219, Percent_Identity=30.1369863013699, Blast_Score=66, Evalue=4e-12, Organism=Caenorhabditis elegans, GI71993394, Length=483, Percent_Identity=33.5403726708075, Blast_Score=266, Evalue=2e-71, Organism=Saccharomyces cerevisiae, GI6324540, Length=510, Percent_Identity=35.2941176470588, Blast_Score=273, Evalue=3e-74, Organism=Saccharomyces cerevisiae, GI6321192, Length=220, Percent_Identity=29.5454545454545, Blast_Score=79, Evalue=2e-15, Organism=Saccharomyces cerevisiae, GI6324742, Length=230, Percent_Identity=25.2173913043478, Blast_Score=75, Evalue=2e-14, Organism=Drosophila melanogaster, GI24665321, Length=495, Percent_Identity=35.959595959596, Blast_Score=293, Evalue=2e-79, Organism=Drosophila melanogaster, GI17864488, Length=308, Percent_Identity=25.3246753246753, Blast_Score=69, Evalue=6e-12,
Paralogues:
None
Copy number: 1,800 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): SYE_BACLD (Q65PD0)
Other databases:
- EMBL: AE017333 - EMBL: CP000002 - RefSeq: YP_077378.1 - RefSeq: YP_089777.1 - ProteinModelPortal: Q65PD0 - SMR: Q65PD0 - STRING: Q65PD0 - EnsemblBacteria: EBBACT00000055900 - EnsemblBacteria: EBBACT00000059426 - GeneID: 3027316 - GeneID: 3097740 - GenomeReviews: AE017333_GR - GenomeReviews: CP000002_GR - KEGG: bld:BLi00110 - KEGG: bli:BL03267 - NMPDR: fig|279010.5.peg.1487 - eggNOG: COG0008 - GeneTree: EBGT00050000002239 - HOGENOM: HBG628189 - OMA: NGYPSYN - ProtClustDB: PRK01406 - BioCyc: BLIC279010-1:BLI00110-MONOMER - BioCyc: BLIC279010:BL03267-MONOMER - GO: GO:0005737 - HAMAP: MF_00022_B - InterPro: IPR008925 - InterPro: IPR020751 - InterPro: IPR001412 - InterPro: IPR004527 - InterPro: IPR000924 - InterPro: IPR020061 - InterPro: IPR020058 - InterPro: IPR014729 - Gene3D: G3DSA:1.10.1160.10 - Gene3D: G3DSA:3.40.50.620 - Gene3D: G3DSA:1.10.10.350 - PANTHER: PTHR10119 - PRINTS: PR00987 - TIGRFAMs: TIGR00464
Pfam domain/function: PF00749 tRNA-synt_1c; SSF48163 tRNA-synt_bind
EC number: =6.1.1.17
Molecular weight: Translated: 56027; Mature: 55896
Theoretical pI: Translated: 4.95; Mature: 4.95
Prosite motif: PS00178 AA_TRNA_LIGASE_I
Important sites: BINDING 255-255
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGNEVRVRYAPSPTGHLHIGNARTALFNYLFARSQGGKFIIRIEDTDRKRNIEGGEQSQL CCCCEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHH NYLKWLGIDWDESVDVGGEYGPYRQSERNDIYKTYYEELLEKGLAYKCYCTEEELEKERE HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH EQAARGEMPRYSGKCRNLTKEEQEKLEAEGRQPSIRFKVPQGEVIRFDDIVKGEISFETD HHHHHCCCCCCCCHHCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEECCEEECEEEEECC GIGDFVIVKKDGTPTYNFAVAVDDYLMKMTHVLRGEDHISNTPKQIMIYNALGWDIPAFG CCCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHCCCHHCCCCCCEEEEEEECCCCCCCCC HMTLIVNESRKKLSKRDESIIQFIEQYEELGYLPEALFNFITLLGWSPVGEEELFTKEQF CEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH IEIFDVNRLSKSPAVFDTHKLKWVNNQYVKKLDLDQVIELTVPHLQKAGKVSEELSGSEQ HHHHHHHHCCCCCCEECCHHEEECCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHCCCHH EWVRKLISLYQEQLSYGAEIVELTELFFKDDIQYNREARTVLEEEQVPEVLRVFAEKLEQ HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LDSFTADEIKASIKAVQKETGHKGKKLFMPIRVATTGQTHGPELPQSIELLGKDTVLKRL HHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH HNIIQ HHHCC >Mature Secondary Structure GNEVRVRYAPSPTGHLHIGNARTALFNYLFARSQGGKFIIRIEDTDRKRNIEGGEQSQL CCCEEEEECCCCCCEEEECCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCHHHH NYLKWLGIDWDESVDVGGEYGPYRQSERNDIYKTYYEELLEKGLAYKCYCTEEELEKERE HHHHHCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCEEEEEECHHHHHHHHH EQAARGEMPRYSGKCRNLTKEEQEKLEAEGRQPSIRFKVPQGEVIRFDDIVKGEISFETD HHHHHCCCCCCCCHHCCCCHHHHHHHHHCCCCCCEEEECCCCCEEEECCEEECEEEEECC GIGDFVIVKKDGTPTYNFAVAVDDYLMKMTHVLRGEDHISNTPKQIMIYNALGWDIPAFG CCCCEEEEECCCCCCEEEEEEHHHHHHHHHHHHCCCHHCCCCCCEEEEEEECCCCCCCCC HMTLIVNESRKKLSKRDESIIQFIEQYEELGYLPEALFNFITLLGWSPVGEEELFTKEQF CEEEEEECHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHH IEIFDVNRLSKSPAVFDTHKLKWVNNQYVKKLDLDQVIELTVPHLQKAGKVSEELSGSEQ HHHHHHHHCCCCCCEECCHHEEECCCHHHHHCCHHHHHHHHHHHHHHHCCHHHHHCCCHH EWVRKLISLYQEQLSYGAEIVELTELFFKDDIQYNREARTVLEEEQVPEVLRVFAEKLEQ HHHHHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LDSFTADEIKASIKAVQKETGHKGKKLFMPIRVATTGQTHGPELPQSIELLGKDTVLKRL HHCCCHHHHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCHHHHHHHHHHHHHHH HNIIQ HHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA