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The map label for this gene is yaaJ [H]

Identifier: 52783876

GI number: 52783876

Start: 29907

End: 30395

Strand: Direct

Name: yaaJ [H]

Synonym: BLi00027

Alternate gene names: 52783876

Gene position: 29907-30395 (Clockwise)

Preceding gene: 52783868

Following gene: 52783877

Centisome position: 0.71

GC content: 52.76

Gene sequence:

>489_bases
ATGCGGATGACACAAGACGAGTTTTATATGAAAGAAGCGGTCAATGAAGCGAGAAAAGCCGAAGAAAAAGGCGAAGTGCC
GATTGGTGCTGTACTCGTTCTGGATGGGGAAATTATCGCCCGCGCCCATAATCTGAGGGAAACCGAGCAAAGGTCGGTTG
CCCACGCGGAGATGCTCGTCATTGAAGAGGCATGCCGGAAGCTGGGGACCTGGCGGCTGGAGAGAGCTGTTCTTTACGTT
ACCCTTGAGCCATGTCCGATGTGTGCCGGAGCGGCCGTTCTTTCCAGAATCGACAAAGTGGTGTTCGGAGCGTCTGATCC
GAAAGGCGGCTGTGCAGGGACTTTGATGAATCTCCTGCAGGAGGAGAGATTCAATCATCAGGCTGAAGTCGTGAGCGGCG
TAATGGAAGAAGAATGCGGCAGGATGCTGAGCGATTTTTTCAGAAAGCTCCGCGCGAAAAAGAAAGCAGAAAAGCAAAGC
GAGCTGTGA

Upstream 100 bases:

>100_bases
GAGAGCTGAATTGGACAATGCGATTGTCTCCTTTCAGATTTTATATTCCTTTAACTATAAGTTAGCCTATTCAGTTTGGC
GAAAAACATTGAAAGAGTGC

Downstream 100 bases:

>100_bases
TGACGGAAATTTGCAATTTAGGATGAAACAAGTTATACTAATGAGTGCGTCACATCAAGACGCAGCTTAAATAATTTGAT
ATTTATTTTGCCGTGCTAAG

Product: YaaJ

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 162; Mature: 162

Protein sequence:

>162_residues
MRMTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIEEACRKLGTWRLERAVLYV
TLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEERFNHQAEVVSGVMEEECGRMLSDFFRKLRAKKKAEKQS
EL

Sequences:

>Translated_162_residues
MRMTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIEEACRKLGTWRLERAVLYV
TLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEERFNHQAEVVSGVMEEECGRMLSDFFRKLRAKKKAEKQS
EL
>Mature_162_residues
MRMTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLVIEEACRKLGTWRLERAVLYV
TLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQEERFNHQAEVVSGVMEEECGRMLSDFFRKLRAKKKAEKQS
EL

Specific function: Deaminates adenosine-34 to inosine in tRNA-Arg2 [H]

COG id: COG0590

COG function: function code FJ; Cytosine/adenosine deaminases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytidine and deoxycytidylate deaminase family [H]

Homologues:

Organism=Homo sapiens, GI124107608, Length=153, Percent_Identity=32.6797385620915, Blast_Score=87, Evalue=5e-18,
Organism=Escherichia coli, GI145693172, Length=155, Percent_Identity=43.2258064516129, Blast_Score=140, Evalue=3e-35,
Organism=Escherichia coli, GI1786616, Length=155, Percent_Identity=29.0322580645161, Blast_Score=60, Evalue=7e-11,
Organism=Caenorhabditis elegans, GI17554608, Length=98, Percent_Identity=41.8367346938776, Blast_Score=92, Evalue=1e-19,
Organism=Caenorhabditis elegans, GI17555996, Length=99, Percent_Identity=40.4040404040404, Blast_Score=84, Evalue=3e-17,
Organism=Caenorhabditis elegans, GI17541138, Length=158, Percent_Identity=31.6455696202532, Blast_Score=84, Evalue=3e-17,
Organism=Saccharomyces cerevisiae, GI6322425, Length=163, Percent_Identity=30.6748466257669, Blast_Score=66, Evalue=2e-12,
Organism=Drosophila melanogaster, GI21355527, Length=146, Percent_Identity=30.1369863013699, Blast_Score=70, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016192
- InterPro:   IPR002125
- InterPro:   IPR016193 [H]

Pfam domain/function: PF00383 dCMP_cyt_deam_1 [H]

EC number: NA

Molecular weight: Translated: 18171; Mature: 18171

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
8.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLV
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
IEEACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQ
HHHHHHHHCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
EERFNHQAEVVSGVMEEECGRMLSDFFRKLRAKKKAEKQSEL
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRMTQDEFYMKEAVNEARKAEEKGEVPIGAVLVLDGEIIARAHNLRETEQRSVAHAEMLV
CCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHH
IEEACRKLGTWRLERAVLYVTLEPCPMCAGAAVLSRIDKVVFGASDPKGGCAGTLMNLLQ
HHHHHHHHCCHHHHHEEEEEEECCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH
EERFNHQAEVVSGVMEEECGRMLSDFFRKLRAKKKAEKQSEL
HHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1698458; 7584024; 9384377 [H]