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The map label for this gene is soj [H]

Identifier: 52145288

GI number: 52145288

Start: 5292557

End: 5293318

Strand: Reverse

Name: soj [H]

Synonym: BCZK5177

Alternate gene names: 52145288

Gene position: 5293318-5292557 (Counterclockwise)

Preceding gene: 52145289

Following gene: 52145287

Centisome position: 99.86

GC content: 37.93

Gene sequence:

>762_bases
ATGGGAAAAATCATTGCTATTGCCAATCAAAAAGGTGGCGTTGGGAAAACAACAACATCTGTTAATTTAGGGGCTGGATT
GGCACAAGTAGGTAAAAAGGTCCTTCTTGTAGATATTGACGCTCAAGGAAATGCAACGACTGGTGTGGGAATTGAAAAAT
CCGAATTAGATCAATGTATTTACAATGTTCTTGTGGAAGATGCAGATGTTCAAGGGGTTATACAGAAAACCGCAACTAAA
AACTTAGATGTTCTACCCGCTACAATTCAATTAGCAGGTGCTGAAATTGAATTGGTACCGACTATTTCCCGGGAAGTACG
TTTGCAAAGGGCATTACAGCCAGTTCGTGATGAATATGATTATATTATTATCGACTGTCCCCCGTCCTTAGGATTATTAA
CGATTAATGCGTTAACTGCAGCGGATTCTGTTATTATTCCTGTTCAATGCGAATATTACGCACTAGAAGGGTTAAGTCAG
CTATTAAATACAGTTCGACTTGTGCAAAAGCACTTAAATAAAAATCTAGCAATTCAAGGTGTATTGCTAACAATGTTGGA
TGCCCGTACAAATTTAGGTATTCAAGTTATAGATGAAGTGAAAAAATACTTTAGGGATAAAGTATATCGTTCAATTATCC
CTCGTAATGTTCGTTTGAGTGAAGCACCAAGTCATGGGAAACCAATTATGCAGTATGACGCTAAATCAAGAGGGGCAGAA
GTATATATAGATTTAGCAGAGGAAGTGATTGCAGGTGGCTAA

Upstream 100 bases:

>100_bases
GAAGTTTAATAAGGACGTAAAAGAAAAACTTTTATTTCATGTTACAATAAACGTAATTGTTATTAGAAATATGATAGAAA
GGTTGAAAGTAGGTGACATC

Downstream 100 bases:

>100_bases
AGGATTAGGAAGAGGAATCAATGTATTTTTTCCTGATTTAGATGTGAAAGAAGAAGAGACAATTCAGGAGATTTTGATAA
CTGAATTAAGGCCGAATCCA

Product: sporulation initiation inhibitor

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 253; Mature: 252

Protein sequence:

>253_residues
MGKIIAIANQKGGVGKTTTSVNLGAGLAQVGKKVLLVDIDAQGNATTGVGIEKSELDQCIYNVLVEDADVQGVIQKTATK
NLDVLPATIQLAGAEIELVPTISREVRLQRALQPVRDEYDYIIIDCPPSLGLLTINALTAADSVIIPVQCEYYALEGLSQ
LLNTVRLVQKHLNKNLAIQGVLLTMLDARTNLGIQVIDEVKKYFRDKVYRSIIPRNVRLSEAPSHGKPIMQYDAKSRGAE
VYIDLAEEVIAGG

Sequences:

>Translated_253_residues
MGKIIAIANQKGGVGKTTTSVNLGAGLAQVGKKVLLVDIDAQGNATTGVGIEKSELDQCIYNVLVEDADVQGVIQKTATK
NLDVLPATIQLAGAEIELVPTISREVRLQRALQPVRDEYDYIIIDCPPSLGLLTINALTAADSVIIPVQCEYYALEGLSQ
LLNTVRLVQKHLNKNLAIQGVLLTMLDARTNLGIQVIDEVKKYFRDKVYRSIIPRNVRLSEAPSHGKPIMQYDAKSRGAE
VYIDLAEEVIAGG
>Mature_252_residues
GKIIAIANQKGGVGKTTTSVNLGAGLAQVGKKVLLVDIDAQGNATTGVGIEKSELDQCIYNVLVEDADVQGVIQKTATKN
LDVLPATIQLAGAEIELVPTISREVRLQRALQPVRDEYDYIIIDCPPSLGLLTINALTAADSVIIPVQCEYYALEGLSQL
LNTVRLVQKHLNKNLAIQGVLLTMLDARTNLGIQVIDEVKKYFRDKVYRSIIPRNVRLSEAPSHGKPIMQYDAKSRGAEV
YIDLAEEVIAGG

Specific function: Inhibits the initiation of sporulation, spo0J antagonizes this inhibition. Soj ultimately inhibits the activation (phosphorylation) of spo0A. It is not required for chromosome partitioning [H]

COG id: COG1192

COG function: function code D; ATPases involved in chromosome partitioning

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the parA family [H]

Homologues:

Organism=Escherichia coli, GI1787423, Length=277, Percent_Identity=25.2707581227437, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002586
- InterPro:   IPR000392 [H]

Pfam domain/function: PF01656 CbiA [H]

EC number: NA

Molecular weight: Translated: 27375; Mature: 27244

Theoretical pI: Translated: 5.40; Mature: 5.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGKIIAIANQKGGVGKTTTSVNLGAGLAQVGKKVLLVDIDAQGNATTGVGIEKSELDQCI
CCCEEEEECCCCCCCCCEEEEECCCCHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
YNVLVEDADVQGVIQKTATKNLDVLPATIQLAGAEIELVPTISREVRLQRALQPVRDEYD
HHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCC
YIIIDCPPSLGLLTINALTAADSVIIPVQCEYYALEGLSQLLNTVRLVQKHLNKNLAIQG
EEEEECCCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VLLTMLDARTNLGIQVIDEVKKYFRDKVYRSIIPRNVRLSEAPSHGKPIMQYDAKSRGAE
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEECCCCCCCE
VYIDLAEEVIAGG
EEEEEHHHHHCCC
>Mature Secondary Structure 
GKIIAIANQKGGVGKTTTSVNLGAGLAQVGKKVLLVDIDAQGNATTGVGIEKSELDQCI
CCEEEEECCCCCCCCCEEEEECCCCHHHCCCEEEEEEECCCCCCCCCCCCCHHHHHHHH
YNVLVEDADVQGVIQKTATKNLDVLPATIQLAGAEIELVPTISREVRLQRALQPVRDEYD
HHHHHCCCCHHHHHHHHHCCCCCEEEEEEEEECCEEEEEECCHHHHHHHHHHHHHHCCCC
YIIIDCPPSLGLLTINALTAADSVIIPVQCEYYALEGLSQLLNTVRLVQKHLNKNLAIQG
EEEEECCCCCCEEEEEEECCCCCEEEEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCHHH
VLLTMLDARTNLGIQVIDEVKKYFRDKVYRSIIPRNVRLSEAPSHGKPIMQYDAKSRGAE
HHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCCCCCCEEECCCCCCCE
VYIDLAEEVIAGG
EEEEEHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1552862; 7584024; 9384377; 8071208 [H]