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The map label for this gene is ssb

Identifier: 52145281

GI number: 52145281

Start: 5287491

End: 5288009

Strand: Reverse

Name: ssb

Synonym: BCZK5170

Alternate gene names: 52145281

Gene position: 5288009-5287491 (Counterclockwise)

Preceding gene: 52145282

Following gene: 52145280

Centisome position: 99.76

GC content: 42.97

Gene sequence:

>519_bases
ATGAATCGTGTTATCCTCGTTGGTCGTTTAACTAAGGACCCTGACTTACGTTACACGCCCAATGGTGTTGCAGTAGCTAC
TTTTACGTTAGCTGTGAATCGCGCATTTGCGAATCAACAAGGTGAGCGTGAAGCTGACTTTATTAATTGTGTAATATGGC
GTAAACAAGCAGAAAACGTAGCAAATTATTTGAAAAAAGGTAGCTTAGCAGGCGTAGATGGACGTCTTCAAACTCGTAAT
TACGAGGGACAAGATGGTAAGCGTGTATATGTAACAGAAGTTCTTGCGGAAAGCGTACAATTTTTAGAGCCGCGTAATGG
CGGTGGGGAGCAACGTGGTTCATTTAATCAGCAACCATCAGGAGCTGGTTTCGGTAACCAAAGCTCTAACCCATTTGGTC
AATCTAGTAATTCGGGCAACCAAGGTAACCAAGGAAACTCTGGATTTACGAAGAATGACGATCCATTTTCAAATGTAGGT
CAACCGATCGACATTTCCGACGACGATTTACCGTTCTAA

Upstream 100 bases:

>100_bases
AATTCGATCGTTTAGCTAAGATCAACGAAGATATCCTTCGTCATATCGTTGTTAAAGAAGAAGAAAAATAATTGATATAT
AAGGGAGAGTGGTTCGATTG

Downstream 100 bases:

>100_bases
TACAGTAAATTTGTTAGTTTTAACAAAGAATGGAGGGAAATAGACATGGCAGGACGCAAAGGTGGACGTGCGAAACGTCG
TAAGGTGTGTTTCTTCACAT

Product: single-stranded DNA-binding protein

Products: NA

Alternate protein names: SSB; Helix-destabilizing protein

Number of amino acids: Translated: 172; Mature: 172

Protein sequence:

>172_residues
MNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTRN
YEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQSSNPFGQSSNSGNQGNQGNSGFTKNDDPFSNVG
QPIDISDDDLPF

Sequences:

>Translated_172_residues
MNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTRN
YEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQSSNPFGQSSNSGNQGNQGNSGFTKNDDPFSNVG
QPIDISDDDLPF
>Mature_172_residues
MNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENVANYLKKGSLAGVDGRLQTRN
YEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPSGAGFGNQSSNPFGQSSNSGNQGNQGNSGFTKNDDPFSNVG
QPIDISDDDLPF

Specific function: This protein is essential for replication of the chromosome. It is also involved in DNA recombination and repair

COG id: COG0629

COG function: function code L; Single-stranded DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SSB domain

Homologues:

Organism=Escherichia coli, GI1790494, Length=115, Percent_Identity=40, Blast_Score=83, Evalue=8e-18,

Paralogues:

None

Copy number: 1622 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 2,000 Molecules/Cell In: Glucose minimal media [C]

Swissprot (AC and ID): SSB_BACAN (Q81JI3)

Other databases:

- EMBL:   AE016879
- EMBL:   AE017334
- EMBL:   AE017225
- RefSeq:   NP_847868.2
- RefSeq:   YP_022408.1
- RefSeq:   YP_031563.1
- ProteinModelPortal:   Q81JI3
- SMR:   Q81JI3
- EnsemblBacteria:   EBBACT00000008539
- EnsemblBacteria:   EBBACT00000016501
- EnsemblBacteria:   EBBACT00000021062
- GeneID:   1085491
- GeneID:   2816011
- GeneID:   2848521
- GenomeReviews:   AE016879_GR
- GenomeReviews:   AE017225_GR
- GenomeReviews:   AE017334_GR
- KEGG:   ban:BA_5722
- KEGG:   bar:GBAA_5722
- KEGG:   bat:BAS5326
- TIGR:   BA_5722
- TIGR:   GBAA_5722
- GeneTree:   EBGT00050000001256
- HOGENOM:   HBG755544
- OMA:   INRTILV
- ProtClustDB:   PRK06751
- BioCyc:   BANT260799:BAS5326-MONOMER
- BioCyc:   BANT261594:GBAA5722-MONOMER
- InterPro:   IPR012340
- InterPro:   IPR016027
- InterPro:   IPR000424
- InterPro:   IPR011344
- Gene3D:   G3DSA:2.40.50.140
- PANTHER:   PTHR10302
- TIGRFAMs:   TIGR00621

Pfam domain/function: PF00436 SSB; SSF50249 Nucleic_acid_OB

EC number: NA

Molecular weight: Translated: 18693; Mature: 18693

Theoretical pI: Translated: 4.93; Mature: 4.93

Prosite motif: PS50935 SSB

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENV
CCCEEEEEECCCCCCCEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHH
ANYLKKGSLAGVDGRLQTRNYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPS
HHHHHCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GAGFGNQSSNPFGQSSNSGNQGNQGNSGFTKNDDPFSNVGQPIDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MNRVILVGRLTKDPDLRYTPNGVAVATFTLAVNRAFANQQGEREADFINCVIWRKQAENV
CCCEEEEEECCCCCCCEECCCCEEEEEHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHH
ANYLKKGSLAGVDGRLQTRNYEGQDGKRVYVTEVLAESVQFLEPRNGGGEQRGSFNQQPS
HHHHHCCCCCCCCCEEECCCCCCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCC
GAGFGNQSSNPFGQSSNSGNQGNQGNSGFTKNDDPFSNVGQPIDISDDDLPF
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12721629