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The map label for this gene is ybhR [H]

Identifier: 52142958

GI number: 52142958

Start: 2419483

End: 2420496

Strand: Direct

Name: ybhR [H]

Synonym: BCZK2281

Alternate gene names: 52142958

Gene position: 2419483-2420496 (Clockwise)

Preceding gene: 52142961

Following gene: 52142956

Centisome position: 45.64

GC content: 34.02

Gene sequence:

>1014_bases
ATGAGAGTTACCGGTATAATTATTCGTATTATTCGCCAATTTTTTCGGGATAAACGTTCGTTAGCGATGATGTTTGGAGC
ACCCATGTTATTACTTTGGTTATTGTCGCTAGTGTTTACACAAAAGGACTATGTACCGCATATTGCTGTTGTTGATATGC
CCGCTCAGTTAGTAAAAGTGATGAAAAATCAAGAAGCGTCAATTTATGAATATAGTATAGAAAAGGCAATGTCTGAGTTG
GAAAATCAAAAGCTAGATGCAGTCATTCATTTAGAAAATGGAAAAATGAATATTGTATTAGAAGGTAGTGATTCGTCAAA
AAATCGTGCTGTACTTCAAATATTACAAAAAAGTACAGAGAAGAACGATATATCAATTATGCAACCTGAAGTAAATTATC
TACATGGGTCTAAAGATTTTACAATGTTTGATGGGCTTGGTCCTGTATTAATTGGTTTCTTTACCTTTTTCTTTGTATTC
ATTTTATCAGGGGTGTCTTTCGTAAGAGAACGTTTAAGTGGTACGTTAGAAAGGCTATTATCGACACCGGTAAGAAGATG
GGAAATAGTTGCAGGGTATATTATTGGTTTTGGAATCTTTGCCTTTATACAATCCATTATTATCGTAAGTTTTTCCGTTT
ATATTTTAGACTTATACGTTGCCGGCTCCATCTGGCTAACGTTACTTATTACATGTATGCTTTCTTTAACTGCTTTAACT
TTAGGGACATTTTTATCGGCATACGCAAATAATGAATTTCAAATGATTCAGTTTATACCGCTTGTCATTGTGCCGCAAAT
TTTCTTTTCTGGTTTGTTTCCAATGGAATCTATGAACCTCCAAATGTTAGGGAAGTTATTTCCGCTCACTTACGGCGCTG
ACGCAATGAGGCAAGTGATGATTCGAAATCAAGGGTTTACAGAGATTGCATTAGATTTAATTGTATTACTACTTTTTTCT
CTATTATTTGCAGTAGGAAATGTATTTGCTTTAAAGAAACATCGCAAAATATAA

Upstream 100 bases:

>100_bases
AAGGAAAGCTAGTGGCGATTGGAACACCTGAAGAATTGAAAAAGCGGGTATCATCAGGAAGAATTGAAGATGTCTTTTTG
TTGGAAGAGGTGACTCCATC

Downstream 100 bases:

>100_bases
AAATGACAAAAAGGGGCTTTATAAATGCAGAAAGATTGGCTGGAGGAATTAATAGCTGCAACTAACACGGATAAACGAAA
TGAACGTCAAATGCGTATAT

Product: ABC transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 337; Mature: 337

Protein sequence:

>337_residues
MRVTGIIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKVMKNQEASIYEYSIEKAMSEL
ENQKLDAVIHLENGKMNIVLEGSDSSKNRAVLQILQKSTEKNDISIMQPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVF
ILSGVSFVRERLSGTLERLLSTPVRRWEIVAGYIIGFGIFAFIQSIIIVSFSVYILDLYVAGSIWLTLLITCMLSLTALT
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPMESMNLQMLGKLFPLTYGADAMRQVMIRNQGFTEIALDLIVLLLFS
LLFAVGNVFALKKHRKI

Sequences:

>Translated_337_residues
MRVTGIIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKVMKNQEASIYEYSIEKAMSEL
ENQKLDAVIHLENGKMNIVLEGSDSSKNRAVLQILQKSTEKNDISIMQPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVF
ILSGVSFVRERLSGTLERLLSTPVRRWEIVAGYIIGFGIFAFIQSIIIVSFSVYILDLYVAGSIWLTLLITCMLSLTALT
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPMESMNLQMLGKLFPLTYGADAMRQVMIRNQGFTEIALDLIVLLLFS
LLFAVGNVFALKKHRKI
>Mature_337_residues
MRVTGIIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKVMKNQEASIYEYSIEKAMSEL
ENQKLDAVIHLENGKMNIVLEGSDSSKNRAVLQILQKSTEKNDISIMQPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVF
ILSGVSFVRERLSGTLERLLSTPVRRWEIVAGYIIGFGIFAFIQSIIIVSFSVYILDLYVAGSIWLTLLITCMLSLTALT
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPMESMNLQMLGKLFPLTYGADAMRQVMIRNQGFTEIALDLIVLLLFS
LLFAVGNVFALKKHRKI

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1787010, Length=254, Percent_Identity=24.0157480314961, Blast_Score=70, Evalue=2e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 38250; Mature: 38250

Theoretical pI: Translated: 9.20; Mature: 9.20

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRVTGIIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKV
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH
MKNQEASIYEYSIEKAMSELENQKLDAVIHLENGKMNIVLEGSDSSKNRAVLQILQKSTE
HHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCC
KNDISIMQPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVFILSGVSFVRERLSGTLERLL
CCCCEEECCCHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STPVRRWEIVAGYIIGFGIFAFIQSIIIVSFSVYILDLYVAGSIWLTLLITCMLSLTALT
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPMESMNLQMLGKLFPLTYGADAMRQVM
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH
IRNQGFTEIALDLIVLLLFSLLFAVGNVFALKKHRKI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MRVTGIIIRIIRQFFRDKRSLAMMFGAPMLLLWLLSLVFTQKDYVPHIAVVDMPAQLVKV
CCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCEEEEECCHHHHHHH
MKNQEASIYEYSIEKAMSELENQKLDAVIHLENGKMNIVLEGSDSSKNRAVLQILQKSTE
HHCCCCHHHHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEECCCCCCHHHHHHHHHHHCC
KNDISIMQPEVNYLHGSKDFTMFDGLGPVLIGFFTFFFVFILSGVSFVRERLSGTLERLL
CCCCEEECCCHHHHCCCCCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
STPVRRWEIVAGYIIGFGIFAFIQSIIIVSFSVYILDLYVAGSIWLTLLITCMLSLTALT
HCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGTFLSAYANNEFQMIQFIPLVIVPQIFFSGLFPMESMNLQMLGKLFPLTYGADAMRQVM
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCHHHHHHHH
IRNQGFTEIALDLIVLLLFSLLFAVGNVFALKKHRKI
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]