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The map label for this gene is ydfR [H]

Identifier: 52142906

GI number: 52142906

Start: 2464744

End: 2465241

Strand: Direct

Name: ydfR [H]

Synonym: BCZK2332

Alternate gene names: 52142906

Gene position: 2464744-2465241 (Clockwise)

Preceding gene: 52142909

Following gene: 52142907

Centisome position: 46.5

GC content: 30.92

Gene sequence:

>498_bases
ATGAATGTTATTTTTGAAAGCATTATTTTAATTTTAACTGGAATTATTGCATTAAAAATGACAGGTAGTACATCTGTTAG
CCAAATGACAAGAGCTGAAATCATTATAGTAGTATCAATTGCACGTATTATTGTAGAGCCTGTATTAAGTAGGAAAGTAG
TCCCATCTATATTTGCAGCTGCAATATTTGCGTGCGTACTTCTTATCATTCATTTCTTTGAATTGAAATCAAAGAAACTG
GAACAAATTTTAAATGGAAGTAGTATTATCATTGTTGAAAGCGGAGAGATTGTAAAAGAGAATTTGAAGCAGGCAAAAAT
GTCGGAACAACAACTTTATATGCAATTAAGAGAAAAAGGTATTCATGATTTAAAGAGTTTACAGCAAGTTACAGCTGAAC
CGAATGGGCGGATTGGTTACCAATTAATAGAGAAAGCTCAGCCGATAACTTTAGAAATGTTAGAAAAAGTAATAGATCAG
TACAATATAAAAAGATAA

Upstream 100 bases:

>100_bases
AAGTATTTGTTTCATATGAATAATAGATAAACTTGCAGCTTATAATTCATCCTTAAGTGGAGAATGCTACTAACATTACC
CATTAAAGGATTAGGTTATT

Downstream 100 bases:

>100_bases
TTTCTCTTGGGAAAAGCCAATACTACAACGGAAGTATTGGTTTTTCTATTTTTTACACACGAATATAGCATAATAATAAG
CCAATCTTAAAATTAGATAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNVIFESIILILTGIIALKMTGSTSVSQMTRAEIIIVVSIARIIVEPVLSRKVVPSIFAAAIFACVLLIIHFFELKSKKL
EQILNGSSIIIVESGEIVKENLKQAKMSEQQLYMQLREKGIHDLKSLQQVTAEPNGRIGYQLIEKAQPITLEMLEKVIDQ
YNIKR

Sequences:

>Translated_165_residues
MNVIFESIILILTGIIALKMTGSTSVSQMTRAEIIIVVSIARIIVEPVLSRKVVPSIFAAAIFACVLLIIHFFELKSKKL
EQILNGSSIIIVESGEIVKENLKQAKMSEQQLYMQLREKGIHDLKSLQQVTAEPNGRIGYQLIEKAQPITLEMLEKVIDQ
YNIKR
>Mature_165_residues
MNVIFESIILILTGIIALKMTGSTSVSQMTRAEIIIVVSIARIIVEPVLSRKVVPSIFAAAIFACVLLIIHFFELKSKKL
EQILNGSSIIIVESGEIVKENLKQAKMSEQQLYMQLREKGIHDLKSLQQVTAEPNGRIGYQLIEKAQPITLEMLEKVIDQ
YNIKR

Specific function: Unknown

COG id: COG2323

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0702 family [H]

Homologues:

Organism=Escherichia coli, GI1787135, Length=153, Percent_Identity=26.797385620915, Blast_Score=68, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007353
- InterPro:   IPR023090 [H]

Pfam domain/function: PF04239 DUF421 [H]

EC number: NA

Molecular weight: Translated: 18535; Mature: 18535

Theoretical pI: Translated: 9.49; Mature: 9.49

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNVIFESIILILTGIIALKMTGSTSVSQMTRAEIIIVVSIARIIVEPVLSRKVVPSIFAA
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIFACVLLIIHFFELKSKKLEQILNGSSIIIVESGEIVKENLKQAKMSEQQLYMQLREKG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
IHDLKSLQQVTAEPNGRIGYQLIEKAQPITLEMLEKVIDQYNIKR
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNVIFESIILILTGIIALKMTGSTSVSQMTRAEIIIVVSIARIIVEPVLSRKVVPSIFAA
CHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AIFACVLLIIHFFELKSKKLEQILNGSSIIIVESGEIVKENLKQAKMSEQQLYMQLREKG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHCC
IHDLKSLQQVTAEPNGRIGYQLIEKAQPITLEMLEKVIDQYNIKR
HHHHHHHHHHHCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]