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The map label for this gene is ykuC [H]

Identifier: 52142866

GI number: 52142866

Start: 2507588

End: 2508871

Strand: Direct

Name: ykuC [H]

Synonym: BCZK2374

Alternate gene names: 52142866

Gene position: 2507588-2508871 (Clockwise)

Preceding gene: 52142868

Following gene: 52142864

Centisome position: 47.3

GC content: 33.57

Gene sequence:

>1284_bases
ATGTCGATAAATGTAGAAATGAAACAAAATAATGGGGTATCACAAGTATTGAAGAATAGATTTGTACAGGGAATTTTAGC
TTCAGCGTTATTTTTACAAATTGGAATATGGGTTCGGAACTTTGCTGTATTACTATACGTAATGGAAATGACAAAAGGTG
ATGCTTTTGCTATTTCGATGATTTCAGTTGCGGAGTTTGCTCCAATTTTCATCTTTTCCTTTATTGGTGGAACGTTTGCT
GATAGGTGGAAGCCGAAAAAGACAATGATATGGTGTGAAACGTTAAGTTCTATTTCAGTATTTGCTGTATTAATTACTCT
AATGTTTGGAACGTGGAAAATCGTATTTTTTGTAACGCTTATTTCTGCAATCCTTTCGCAGTTTTCTCAACCATCTGGAA
TGAAATTATTTAAACAACATTTATCGGCAGAACAAATTCAATTAGCAATGTCTATTTATCAAACAATATTTGCGATATTT
ATGGTTTTAGGACCGATTCTTGGAACATTTATTTTTCATAGTTTTGGAATTTATATTTCAATTATTATAACAGGTATCGC
TTTTTTACTTGCAGCAGCTGTGTTGTTATTTCTTCCGAAAGATCGTGAGAATGATAATGAGAAGAAAGAAATTACACTAT
TACAGGAAATGGTGGATGGTATTAAGTATGTCAAAAAGAAAAGAGCATTAACTTTGTTAGGGCTTTGTTTTATGGCAGCA
GGACTAGGTATAGGTTTAATTCAGCCATTAGGCATATTTATCGTAACTGAGCAGTTAGGGCTGTCAAAAGAGAGTTTACA
ATGGTTATTAACAGTAAATGGTGCAGGAATGATTGTTGGCGGTGCTTTAGCGATGGTATTTGCAAAAAACGTTGCGCCGC
AAAAAATGTTAATTATCGGTATGCTGGGTCAGGCCATTGGCATTGGTATTATAGGTTATTCGACAAATTTATGGGTAACA
CTTACAGCACAACTTTTTAGTGGGTTAGCTCTTCCATGTATCCAAATAGGTATTAATACGCTCATTATTCAAAATAGTGA
TACAGATTTTATTGGTCGTGTAAATGGCATTTTAAGTCCACTATTCACCGGTTCAATGGTAGTAACGATGAGTATTGCTG
GCTCATTAAAGGAGATGTTTTCATTAAGTATGATGTATGAAGGAACGGCTTTCCTATTTATAATTGGTTTATTGTTTATT
TTACCTATATACAATTTAAAGCCAACGATAGCAATAGAAAGTGAAATAAGTGGTAAAGGAAGTGCTATACAAAATGAATC
CTAA

Upstream 100 bases:

>100_bases
CATTTATAGAAAAGGGATGTATTTCGCTCTGCGAAAAATATAGTCTTTTCATATGATTTGTGCTGCCTCCTGTTCAGAAC
ATGAAATAGGAGGCCTTTTT

Downstream 100 bases:

>100_bases
TCCCAATGTTAAGTACCCTATTGAAGGAAATGAAAATGTCCAATTTATAAAAAATACAATAACAAAAGCTAATATACTCG
TTGGAGACTATTCATATTAT

Product: macrolide efflux protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 426

Protein sequence:

>427_residues
MSINVEMKQNNGVSQVLKNRFVQGILASALFLQIGIWVRNFAVLLYVMEMTKGDAFAISMISVAEFAPIFIFSFIGGTFA
DRWKPKKTMIWCETLSSISVFAVLITLMFGTWKIVFFVTLISAILSQFSQPSGMKLFKQHLSAEQIQLAMSIYQTIFAIF
MVLGPILGTFIFHSFGIYISIIITGIAFLLAAAVLLFLPKDRENDNEKKEITLLQEMVDGIKYVKKKRALTLLGLCFMAA
GLGIGLIQPLGIFIVTEQLGLSKESLQWLLTVNGAGMIVGGALAMVFAKNVAPQKMLIIGMLGQAIGIGIIGYSTNLWVT
LTAQLFSGLALPCIQIGINTLIIQNSDTDFIGRVNGILSPLFTGSMVVTMSIAGSLKEMFSLSMMYEGTAFLFIIGLLFI
LPIYNLKPTIAIESEISGKGSAIQNES

Sequences:

>Translated_427_residues
MSINVEMKQNNGVSQVLKNRFVQGILASALFLQIGIWVRNFAVLLYVMEMTKGDAFAISMISVAEFAPIFIFSFIGGTFA
DRWKPKKTMIWCETLSSISVFAVLITLMFGTWKIVFFVTLISAILSQFSQPSGMKLFKQHLSAEQIQLAMSIYQTIFAIF
MVLGPILGTFIFHSFGIYISIIITGIAFLLAAAVLLFLPKDRENDNEKKEITLLQEMVDGIKYVKKKRALTLLGLCFMAA
GLGIGLIQPLGIFIVTEQLGLSKESLQWLLTVNGAGMIVGGALAMVFAKNVAPQKMLIIGMLGQAIGIGIIGYSTNLWVT
LTAQLFSGLALPCIQIGINTLIIQNSDTDFIGRVNGILSPLFTGSMVVTMSIAGSLKEMFSLSMMYEGTAFLFIIGLLFI
LPIYNLKPTIAIESEISGKGSAIQNES
>Mature_426_residues
SINVEMKQNNGVSQVLKNRFVQGILASALFLQIGIWVRNFAVLLYVMEMTKGDAFAISMISVAEFAPIFIFSFIGGTFAD
RWKPKKTMIWCETLSSISVFAVLITLMFGTWKIVFFVTLISAILSQFSQPSGMKLFKQHLSAEQIQLAMSIYQTIFAIFM
VLGPILGTFIFHSFGIYISIIITGIAFLLAAAVLLFLPKDRENDNEKKEITLLQEMVDGIKYVKKKRALTLLGLCFMAAG
LGIGLIQPLGIFIVTEQLGLSKESLQWLLTVNGAGMIVGGALAMVFAKNVAPQKMLIIGMLGQAIGIGIIGYSTNLWVTL
TAQLFSGLALPCIQIGINTLIIQNSDTDFIGRVNGILSPLFTGSMVVTMSIAGSLKEMFSLSMMYEGTAFLFIIGLLFIL
PIYNLKPTIAIESEISGKGSAIQNES

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004751
- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 46665; Mature: 46534

Theoretical pI: Translated: 9.29; Mature: 9.29

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
4.7 %Met     (Mature Protein)
5.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCC
>Mature Secondary Structure 
SINVEMKQNNGVSQVLKNRFVQGILASALFLQIGIWVRNFAVLLYVMEMTKGDAFAISM
CEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH
ISVAEFAPIFIFSFIGGTFADRWKPKKTMIWCETLSSISVFAVLITLMFGTWKIVFFVTL
HHHHHHHHHHHHHHHCCHHHHCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISAILSQFSQPSGMKLFKQHLSAEQIQLAMSIYQTIFAIFMVLGPILGTFIFHSFGIYIS
HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IIITGIAFLLAAAVLLFLPKDRENDNEKKEITLLQEMVDGIKYVKKKRALTLLGLCFMAA
HHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGIGLIQPLGIFIVTEQLGLSKESLQWLLTVNGAGMIVGGALAMVFAKNVAPQKMLIIG
CCCHHHHHHHHHEEEEHHHCCCHHHCEEEEEECCCCHHHHHHHHHHHHHCCCCHHHHHHH
MLGQAIGIGIIGYSTNLWVTLTAQLFSGLALPCIQIGINTLIIQNSDTDFIGRVNGILSP
HHHHHHHEEEEEECCCEEEEEHHHHHCCCHHHHHHHCCEEEEEECCCCCHHHHHHHHHHH
LFTGSMVVTMSIAGSLKEMFSLSMMYEGTAFLFIIGLLFILPIYNLKPTIAIESEISGKG
HHCCHHHEEHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCC
SAIQNES
CCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]