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The map label for this gene is yjgF [C]

Identifier: 52142806

GI number: 52142806

Start: 2570372

End: 2570770

Strand: Direct

Name: yjgF [C]

Synonym: BCZK2433

Alternate gene names: 52142806

Gene position: 2570372-2570770 (Clockwise)

Preceding gene: 52142808

Following gene: 52142801

Centisome position: 48.49

GC content: 31.83

Gene sequence:

>399_bases
ATGCAAAAGAAATTTATCAATCCAGAAACGATGCCACCAACTTTTGGATACTCACATGTAGTGGAAGTTAGTAACGCTAA
ACGAACGATTTACATAACTGGACAAGTAGCAATTAATAATATAGACGGTCAAATTGTTGGAATTAATGATTTAGCTACAC
AAACACGACAAGTATTTGAAAATATTAAAATCGTATTAGAAGCGTCAGACTTAAATTTCAATAATGTAGTAAAATTAACA
TTTTTCTTAACAGACATTTCTCAAATGGCCGTTGTTAGAGATATTCGAGATCAATACATTGACACTAATAATCCACCGGC
AAGTTCAGCTGTCGAAGTTAGAAAGTTAATTAACGATAACTTATTAATTGAAGTCGAAGCAATTGCTGTAGCAAACTAA

Upstream 100 bases:

>100_bases
GTAGCAGCTGAACGGTAAATAATTATTATAGTAAATAAGGGATAATCTGAATTTAAAATCTAATATAAAGAAAATGAGAT
ATTTAAAGAGGAGAAGAGCC

Downstream 100 bases:

>100_bases
TTTTAAAAACTTATTATGAATCATATCCATGCAATTCGTTTAATGTGTTCATTTAAAACGAATTGCATTTTTTATTGTCT
TAAATATAATTTATATCTGG

Product: endoribonuclease L-PSP

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 132; Mature: 132

Protein sequence:

>132_residues
MQKKFINPETMPPTFGYSHVVEVSNAKRTIYITGQVAINNIDGQIVGINDLATQTRQVFENIKIVLEASDLNFNNVVKLT
FFLTDISQMAVVRDIRDQYIDTNNPPASSAVEVRKLINDNLLIEVEAIAVAN

Sequences:

>Translated_132_residues
MQKKFINPETMPPTFGYSHVVEVSNAKRTIYITGQVAINNIDGQIVGINDLATQTRQVFENIKIVLEASDLNFNNVVKLT
FFLTDISQMAVVRDIRDQYIDTNNPPASSAVEVRKLINDNLLIEVEAIAVAN
>Mature_132_residues
MQKKFINPETMPPTFGYSHVVEVSNAKRTIYITGQVAINNIDGQIVGINDLATQTRQVFENIKIVLEASDLNFNNVVKLT
FFLTDISQMAVVRDIRDQYIDTNNPPASSAVEVRKLINDNLLIEVEAIAVAN

Specific function: Unknown

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Homo sapiens, GI5032215, Length=129, Percent_Identity=35.6589147286822, Blast_Score=71, Evalue=3e-13,
Organism=Escherichia coli, GI87082396, Length=130, Percent_Identity=35.3846153846154, Blast_Score=66, Evalue=6e-13,
Organism=Escherichia coli, GI87082213, Length=131, Percent_Identity=29.7709923664122, Blast_Score=61, Evalue=2e-11,

Paralogues:

None

Copy number: 1320 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 14737; Mature: 14737

Theoretical pI: Translated: 4.62; Mature: 4.62

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKKFINPETMPPTFGYSHVVEVSNAKRTIYITGQVAINNIDGQIVGINDLATQTRQVFE
CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCEEEECHHHHHHHHHHHH
NIKIVLEASDLNFNNVVKLTFFLTDISQMAVVRDIRDQYIDTNNPPASSAVEVRKLINDN
HEEEEEEECCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
LLIEVEAIAVAN
EEEEEEEEEECC
>Mature Secondary Structure
MQKKFINPETMPPTFGYSHVVEVSNAKRTIYITGQVAINNIDGQIVGINDLATQTRQVFE
CCCCCCCCCCCCCCCCCCEEEEECCCCEEEEEEEEEEEECCCCEEEECHHHHHHHHHHHH
NIKIVLEASDLNFNNVVKLTFFLTDISQMAVVRDIRDQYIDTNNPPASSAVEVRKLINDN
HEEEEEEECCCCCCCEEEEEEEEHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCC
LLIEVEAIAVAN
EEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679194 [H]