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The map label for this gene is yybD [H]

Identifier: 52142719

GI number: 52142719

Start: 2649161

End: 2649595

Strand: Direct

Name: yybD [H]

Synonym: BCZK2522

Alternate gene names: 52142719

Gene position: 2649161-2649595 (Clockwise)

Preceding gene: 52142718

Following gene: 52142711

Centisome position: 49.98

GC content: 31.95

Gene sequence:

>435_bases
TTGCACTCCAAACTCATAACAGAACTTACAGATTTAGAAACTGCCTTTCATATTCGAAAAGAAGTATTTGTAAAAGAACA
AAATGTCCCACTTGAAGATGAATTCGATATGTTTGATGAAATCGGGGAGAAATGTAAACATATTTTAGTTTATTATAATG
AGCTTCCTGTTGGTACAGGTCGTATCCGATTTGTTGATGGAATTGGAAAATTAGAACGTATTTGTATTTTAAAAGACTAT
CGTAAATACGGTTTAGGCAAAGTAATTATTCAAGCGTTAGAAGAAATTGCTCGTGAAAAAGAATCTACAAAAGTAAAACT
ACACGGTCAAACACAGGCTGAAGGATTTTATAAAAAACTAGGTTATCAAACCTCTTCTGATGTATTTATGGAAGATGGCA
TTCCGCATATACTTATGACGAAAATGTTATCATAA

Upstream 100 bases:

>100_bases
TGACTCTTACAGTCAGCTTTTTTATATTTTCTCGTTATTACGTAACATTATGATATACTATGAAAACAAAAGTACATCAC
ACTAGAAAGGATTGAACAAT

Downstream 100 bases:

>100_bases
TAAAAAAGGCAGTATATGAAACTACTTTATGTATTCATATACTGCCCTTTTTTATTTGTAGAAAAATGAATTCTCAAGAT
GTCCTTTTGCATCAAAGCCC

Product: acetyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MHSKLITELTDLETAFHIRKEVFVKEQNVPLEDEFDMFDEIGEKCKHILVYYNELPVGTGRIRFVDGIGKLERICILKDY
RKYGLGKVIIQALEEIAREKESTKVKLHGQTQAEGFYKKLGYQTSSDVFMEDGIPHILMTKMLS

Sequences:

>Translated_144_residues
MHSKLITELTDLETAFHIRKEVFVKEQNVPLEDEFDMFDEIGEKCKHILVYYNELPVGTGRIRFVDGIGKLERICILKDY
RKYGLGKVIIQALEEIAREKESTKVKLHGQTQAEGFYKKLGYQTSSDVFMEDGIPHILMTKMLS
>Mature_144_residues
MHSKLITELTDLETAFHIRKEVFVKEQNVPLEDEFDMFDEIGEKCKHILVYYNELPVGTGRIRFVDGIGKLERICILKDY
RKYGLGKVIIQALEEIAREKESTKVKLHGQTQAEGFYKKLGYQTSSDVFMEDGIPHILMTKMLS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 N-acetyltransferase domain [H]

Homologues:

Organism=Caenorhabditis elegans, GI17557716, Length=125, Percent_Identity=33.6, Blast_Score=66, Evalue=5e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000182
- InterPro:   IPR016181 [H]

Pfam domain/function: PF00583 Acetyltransf_1 [H]

EC number: NA

Molecular weight: Translated: 16686; Mature: 16686

Theoretical pI: Translated: 6.36; Mature: 6.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHSKLITELTDLETAFHIRKEVFVKEQNVPLEDEFDMFDEIGEKCKHILVYYNELPVGTG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
RIRFVDGIGKLERICILKDYRKYGLGKVIIQALEEIAREKESTKVKLHGQTQAEGFYKKL
CEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHH
GYQTSSDVFMEDGIPHILMTKMLS
CCCCCCCCHHHCCCCHHHHHHHCC
>Mature Secondary Structure
MHSKLITELTDLETAFHIRKEVFVKEQNVPLEDEFDMFDEIGEKCKHILVYYNELPVGTG
CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCC
RIRFVDGIGKLERICILKDYRKYGLGKVIIQALEEIAREKESTKVKLHGQTQAEGFYKKL
CEEEECCHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHCCEEEECCCHHHHHHHHHH
GYQTSSDVFMEDGIPHILMTKMLS
CCCCCCCCHHHCCCCHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]