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The map label for this gene is soxA

Identifier: 52142676

GI number: 52142676

Start: 2686790

End: 2687122

Strand: Direct

Name: soxA

Synonym: BCZK2563

Alternate gene names: NA

Gene position: 2686790-2687122 (Clockwise)

Preceding gene: 52142678

Following gene: 52142677

Centisome position: 50.69

GC content: 38.44

Gene sequence:

>333_bases
ATGAGTAGAATTACACATCACCCTATTTTAGGGAGTTTAAATAATAGTAATCGCATTACTTTTCAATTTAACGGTCAACA
ATATGAAGCATATGAACATGAAACGATTGCGGCCGCTTTACTTGCAAACGGAATAAGAACATTAAGAGTGCACGAAGATA
ACGGGACGCCGCGAGGTATTTACTGTAATATCGGACATTGTTCTGAATGCCGCGTCACTGTAAACAATCAAGCAAACGTA
CGATCATGCTTAACTGTTGTTGAAAACGGTATGGTTGTTGATAGTGGTAAACAGCATCCAAATATCGTTAGAGAGATGGT
GAAAAAGCGATGA

Upstream 100 bases:

>100_bases
TGATTGAACATGCAACTCCAGGCGTAACTACAAATGATATTCCATTGAAATATCAACCACCGGTACGAGCAGTTACTTTT
GGATCGGTAGGTGAAAGTAA

Downstream 100 bases:

>100_bases
ACGATGTCATAATTATCGGAGCTGGCCCAGCGGGTTTATCAGCCTCTATCTCTTGCGCTCGATTTGGACTGAATGTACTT
GTTATTGATGAATTTATGAA

Product: sarcosine oxidase, alpha subunit

Products: glycine; formaldehyde; H2O2

Alternate protein names: Sarcosine Oxidase Subunit Alpha; Proline Dehydrogenase Alpha Subunit; FAD-Dependent Pyridine Nucleotide-Disulfide Oxidoreductase; FAD-Dependent Pyridine Nucleotide-Disulphide Oxidoreductase; D-Nopaline Dehydrogenase; SoxA Protein; Dye-Linked L-Proline Dehydrogenase; Dye-L-ProDH Alpha

Number of amino acids: Translated: 110; Mature: 109

Protein sequence:

>110_residues
MSRITHHPILGSLNNSNRITFQFNGQQYEAYEHETIAAALLANGIRTLRVHEDNGTPRGIYCNIGHCSECRVTVNNQANV
RSCLTVVENGMVVDSGKQHPNIVREMVKKR

Sequences:

>Translated_110_residues
MSRITHHPILGSLNNSNRITFQFNGQQYEAYEHETIAAALLANGIRTLRVHEDNGTPRGIYCNIGHCSECRVTVNNQANV
RSCLTVVENGMVVDSGKQHPNIVREMVKKR
>Mature_109_residues
SRITHHPILGSLNNSNRITFQFNGQQYEAYEHETIAAALLANGIRTLRVHEDNGTPRGIYCNIGHCSECRVTVNNQANVR
SCLTVVENGMVVDSGKQHPNIVREMVKKR

Specific function: Unknown

COG id: COG0446

COG function: function code R; Uncharacterized NAD(FAD)-dependent dehydrogenases

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.5.3.1

Molecular weight: Translated: 12345; Mature: 12214

Theoretical pI: Translated: 8.66; Mature: 8.66

Prosite motif: PS51085 2FE2S_FER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.6 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRITHHPILGSLNNSNRITFQFNGQQYEAYEHETIAAALLANGIRTLRVHEDNGTPRGI
CCCCCCCCEEECCCCCCEEEEEECCCEEECHHHHHHHHHHHHCCEEEEEEECCCCCCCEE
YCNIGHCSECRVTVNNQANVRSCLTVVENGMVVDSGKQHPNIVREMVKKR
EEECCCCCCEEEEECCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHCC
>Mature Secondary Structure 
SRITHHPILGSLNNSNRITFQFNGQQYEAYEHETIAAALLANGIRTLRVHEDNGTPRGI
CCCCCCCEEECCCCCCEEEEEECCCEEECHHHHHHHHHHHHCCEEEEEEECCCCCCCEE
YCNIGHCSECRVTVNNQANVRSCLTVVENGMVVDSGKQHPNIVREMVKKR
EEECCCCCCEEEEECCCCCHHHHHHHHHCCEEEECCCCCHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: sarcosine; H2O; O2

Specific reaction: sarcosine + H2O + O2 = glycine + formaldehyde + H2O2

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA