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The map label for this gene is ycgF [H]

Identifier: 52142410

GI number: 52142410

Start: 2948298

End: 2948924

Strand: Direct

Name: ycgF [H]

Synonym: BCZK2832

Alternate gene names: 52142410

Gene position: 2948298-2948924 (Clockwise)

Preceding gene: 52142411

Following gene: 52142407

Centisome position: 55.62

GC content: 30.3

Gene sequence:

>627_bases
GTGGGCATATTTTTAAGCTATGTTTTTTTAGGTTTATCATTATCTGCTCCAATGGGACCTATAAATGCTGCGCAGCTAGA
AAAAGGTATTAGGAGTGGTTTTTTTCATGCTTGGATCCTTGGTATAGGAGCCTTACTTGCAGATGTTATCTACATGGCAC
TTATTTATTTAGGTGTCATTCATTTCCTCGAAAAAGATATTATCAAACTTTTCTTATGGTCTTTCGGCGCTTTTGTTTTA
ATCTATACAGGCATTGAAAGTTTAAAAAACGCGAATCAAATTAGTATTAGTAATACTAGAAATGACGATTCAATTATTAA
AAGCTTTTTTTCTGGTTTTTTTATGTCTTTATCGAATCCATTAACAATTCTATTTTGGCTTGGAATTTTCGGCTCTATAT
TAGCAAAAGCCGCTTCTTCCTATAATAAAGAGCAGCTTTTGTTATATAGCTTTGGTACTATTTTAGGTATTTTTATTTGG
GATATTACGATGGCAAGTACTTCTAGTATATTTCGTAAAATTTTAAATACGCGTATATTGTCTCTTATAACAGTAATATC
TGGAATATCACTTATTATTTATGGATTATATTTTGGTTTTCAAACTTACCAAATCATTTTTCAATAG

Upstream 100 bases:

>100_bases
AACAAGTAATCTACTCCACTTTTTATTATTTAGTTGTACAAACTTTAACCACTGAATAGATTTAATATAGATCAAATTTA
GTGGGAGGAGCATATTATAC

Downstream 100 bases:

>100_bases
CTTCTATTATTTAGTTGTTACATACTACTCATATTGTGTAAAAATAGATTCTTCATATAGCTGTATTCCTTTTCCTTGAG
ACAAAATGAACAATTATAGT

Product: amino acid transporter LysE

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MGIFLSYVFLGLSLSAPMGPINAAQLEKGIRSGFFHAWILGIGALLADVIYMALIYLGVIHFLEKDIIKLFLWSFGAFVL
IYTGIESLKNANQISISNTRNDDSIIKSFFSGFFMSLSNPLTILFWLGIFGSILAKAASSYNKEQLLLYSFGTILGIFIW
DITMASTSSIFRKILNTRILSLITVISGISLIIYGLYFGFQTYQIIFQ

Sequences:

>Translated_208_residues
MGIFLSYVFLGLSLSAPMGPINAAQLEKGIRSGFFHAWILGIGALLADVIYMALIYLGVIHFLEKDIIKLFLWSFGAFVL
IYTGIESLKNANQISISNTRNDDSIIKSFFSGFFMSLSNPLTILFWLGIFGSILAKAASSYNKEQLLLYSFGTILGIFIW
DITMASTSSIFRKILNTRILSLITVISGISLIIYGLYFGFQTYQIIFQ
>Mature_207_residues
GIFLSYVFLGLSLSAPMGPINAAQLEKGIRSGFFHAWILGIGALLADVIYMALIYLGVIHFLEKDIIKLFLWSFGAFVLI
YTGIESLKNANQISISNTRNDDSIIKSFFSGFFMSLSNPLTILFWLGIFGSILAKAASSYNKEQLLLYSFGTILGIFIWD
ITMASTSSIFRKILNTRILSLITVISGISLIIYGLYFGFQTYQIIFQ

Specific function: Unknown

COG id: COG1280

COG function: function code E; Putative threonine efflux protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the rht family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001123 [H]

Pfam domain/function: PF01810 LysE [H]

EC number: NA

Molecular weight: Translated: 23196; Mature: 23065

Theoretical pI: Translated: 9.48; Mature: 9.48

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGIFLSYVFLGLSLSAPMGPINAAQLEKGIRSGFFHAWILGIGALLADVIYMALIYLGVI
CHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFLEKDIIKLFLWSFGAFVLIYTGIESLKNANQISISNTRNDDSIIKSFFSGFFMSLSNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCH
LTILFWLGIFGSILAKAASSYNKEQLLLYSFGTILGIFIWDITMASTSSIFRKILNTRIL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLITVISGISLIIYGLYFGFQTYQIIFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GIFLSYVFLGLSLSAPMGPINAAQLEKGIRSGFFHAWILGIGALLADVIYMALIYLGVI
HHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
HFLEKDIIKLFLWSFGAFVLIYTGIESLKNANQISISNTRNDDSIIKSFFSGFFMSLSNP
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCH
LTILFWLGIFGSILAKAASSYNKEQLLLYSFGTILGIFIWDITMASTSSIFRKILNTRIL
HHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SLITVISGISLIIYGLYFGFQTYQIIFQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969502; 9384377 [H]