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The map label for this gene is spoVFB [H]

Identifier: 52141686

GI number: 52141686

Start: 3695482

End: 3696081

Strand: Reverse

Name: spoVFB [H]

Synonym: BCZK3561

Alternate gene names: 52141686

Gene position: 3696081-3695482 (Counterclockwise)

Preceding gene: 52141685

Following gene: 52141687

Centisome position: 69.73

GC content: 39.83

Gene sequence:

>600_bases
ATGAATTTAAAAGGGAAAAGAATAGGGTTTGGTTTTACTGGTTCACATTGTACGTACGAAGAAGTAATGCCTCATTTAGA
AAAATTAATTGCTGAGGGAGCAGAAGTACGTCCTGTTGTTTCTTACACTGTTCAATCAACAAATACGAGATTTGGAGAAG
GGGCAGAATGGATTAAAAAGATTGAAGAAGTAACAGGTTTTAAAGCGATTAATTCAATCGTTGGCGCAGAACCCCTAGGA
CCTAAAATTCCACTAGATTGTATGGTAATTGCACCGCTAACAGGAAATTCTATGAGTAAATTTGCAAATGCAATGACAGA
CTCTCCAGTATTAATGGCAGCAAAAGCGACGCTAAGAAATGGCAAGCCTGTCGTATTGGCCGTTTCGACGAATGATGCTT
TAGGGCTTAATGGAGTAAACCTCATGCGCCTAATGGCCACAAAAAACATCTACTTCGTCCCATTCGGTCAAGATGCACCA
GAGAAAAAACCAAACTCAATGGTAGCTCGCATGGAGCTGCTTGAAGATACAGTGTTAGAAGCTCTGCAAGGTAAGCAATT
GCAACCGGTTGTCGTAGAAAAATTCAGATATATGAATTAA

Upstream 100 bases:

>100_bases
TACCAGGTATTGTTGCTCCAAAAACAGCCGGACAAATTTTAGCGAATGTTCTTTCTCAGTTACTGGCAGAAGACGTAATC
GCAAGAAAGGAGAATGGGGA

Downstream 100 bases:

>100_bases
AAAACGAAAAAAAACGGACAATTTTTGATGAAACCATCATTCTTACTGTAGAATATGATAAAATTAACGTTATTAAGATT
AGAAGGGGTATTCTATACTC

Product: dipicolinate synthase subunit B

Products: dihydrodipicolinate; H2O

Alternate protein names: NA

Number of amino acids: Translated: 199; Mature: 199

Protein sequence:

>199_residues
MNLKGKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTNTRFGEGAEWIKKIEEVTGFKAINSIVGAEPLG
PKIPLDCMVIAPLTGNSMSKFANAMTDSPVLMAAKATLRNGKPVVLAVSTNDALGLNGVNLMRLMATKNIYFVPFGQDAP
EKKPNSMVARMELLEDTVLEALQGKQLQPVVVEKFRYMN

Sequences:

>Translated_199_residues
MNLKGKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTNTRFGEGAEWIKKIEEVTGFKAINSIVGAEPLG
PKIPLDCMVIAPLTGNSMSKFANAMTDSPVLMAAKATLRNGKPVVLAVSTNDALGLNGVNLMRLMATKNIYFVPFGQDAP
EKKPNSMVARMELLEDTVLEALQGKQLQPVVVEKFRYMN
>Mature_199_residues
MNLKGKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTNTRFGEGAEWIKKIEEVTGFKAINSIVGAEPLG
PKIPLDCMVIAPLTGNSMSKFANAMTDSPVLMAAKATLRNGKPVVLAVSTNDALGLNGVNLMRLMATKNIYFVPFGQDAP
EKKPNSMVARMELLEDTVLEALQGKQLQPVVVEKFRYMN

Specific function: Unknown

COG id: COG0452

COG function: function code H; Phosphopantothenoylcysteine synthetase/decarboxylase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR014214
- InterPro:   IPR003382 [H]

Pfam domain/function: PF02441 Flavoprotein [H]

EC number: 4.2.1.52

Molecular weight: Translated: 21719; Mature: 21719

Theoretical pI: Translated: 8.68; Mature: 8.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
5.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLKGKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTNTRFGEGAEWIKK
CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHH
IEEVTGFKAINSIVGAEPLGPKIPLDCMVIAPLTGNSMSKFANAMTDSPVLMAAKATLRN
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCC
GKPVVLAVSTNDALGLNGVNLMRLMATKNIYFVPFGQDAPEKKPNSMVARMELLEDTVLE
CCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
ALQGKQLQPVVVEKFRYMN
HHCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNLKGKRIGFGFTGSHCTYEEVMPHLEKLIAEGAEVRPVVSYTVQSTNTRFGEGAEWIKK
CCCCCCEEECCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCCCCCHHHHHH
IEEVTGFKAINSIVGAEPLGPKIPLDCMVIAPLTGNSMSKFANAMTDSPVLMAAKATLRN
HHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEHHHHCC
GKPVVLAVSTNDALGLNGVNLMRLMATKNIYFVPFGQDAPEKKPNSMVARMELLEDTVLE
CCEEEEEEECCCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHH
ALQGKQLQPVVVEKFRYMN
HHCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: L-aspartate 4-semialdehyde; pyruvate

Specific reaction: L-aspartate 4-semialdehyde + pyruvate = dihydrodipicolinate + 2 H2O

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8098035; 8345520; 9384377 [H]