Definition | Bacillus cereus E33L, complete genome. |
---|---|
Accession | NC_006274 |
Length | 5,300,915 |
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The map label for this gene is infB [H]
Identifier: 52141676
GI number: 52141676
Start: 3705355
End: 3707415
Strand: Reverse
Name: infB [H]
Synonym: BCZK3572
Alternate gene names: 52141676
Gene position: 3707415-3705355 (Counterclockwise)
Preceding gene: 52141672
Following gene: 52141675
Centisome position: 69.94
GC content: 38.28
Gene sequence:
>2061_bases ATGAGTAAAATTCGAGTGCATGAATATGCGAAAAAACATAATATCTCAAGTAAAGATCTTATGACAAAACTAAAAGAAAT GAATATCGAGGTTTCGAATCATATGACAATGTTAGACGATGAAGTAGTAAACAAATTAGATAATGAGTATCAAGCTGAAA AACCTTCTGTTGCAGATGAGTTTGAAGTAGAAGAAAAAGTTGTTCGTAGTAAAAAGAACAGCAATAAGAAAAAGAAAAAA GGCAAAGGAAACGAAGACAAGCGTCAAGAGAACTTTGCTGGAAGACAACAAACACAAACTGTAGAAACACCAGATAAAAT TACTTTCTCTGGAAGCCTTACAGTAGGTGACCTTGCTAAGAAATTAAGCAAAGAGCCATCTGAAATTATTAAGAAGCTCT TCATGCTTGGAATTATGGCAACAATTAACCAAGACTTAGATAAAGATACAATTGAGTTAATTGCTAACGACTACGGTATT GAAGTAGAAGAAGAAGTAATTGTCAGCGAGACTGAGTTTGAAACATTCATCGATGAGCAAGATGATGAAGAGAACTTAAA AGAGCGTCCAGCTGTAGTTACAATCATGGGACACGTTGACCATGGTAAAACAACATTACTTGACTCTATCCGTAACTCTA AAGTAACTGCTGGCGAAGCAGGTGGAATTACTCAGCATATTGGTGCATACCAAGTTGAAGTAAATGACAAGAAGATTACA TTCTTAGATACACCTGGTCACGCGGCGTTTACAACGATGCGTGCTCGTGGTGCACAAGTAACGGATATTACAATCCTTGT TGTTGCAGCTGATGACGGTGTTATGCCACAAACAGTTGAAGCAATTAACCATGCGAAAGCAGCAGGAGTACCAATTATTG TTGCTGTGAATAAAATGGATAAACCAGCTGCGAATCCTGATCGCGTAATGCAAGAACTAACAGAATATGAATTAGTTCCA GAAGCATGGGGTGGAGATACAATCTTCGTACCAATCTCAGCGATTCAAGGCGAAGGAATTGACAACTTACTAGAAATGAT TCTTCTTGTGAGTGAAGTAGAAGAATATAAAGCAAATCCAAACCGCTATGCAACTGGTACTGTAATTGAAGCACAGCTTG ATAAAGGTAAAGGAACTATCGCGACATTACTTGTTCAAAACGGTACGCTTCGAGTTGGAGACCCAATCGTTGTTGGTACT TCATTCGGACGTGTTCGTGCAATGGTAAGTGATATTGGTCGTCGTGTAAAAGTTGCTGGTCCATCAACTCCTGTTGAAAT TACAGGTTTAAACGAAGTACCACAAGCGGGAGATCGTTTCATGGCATTCGCTGATGAGAAGAAAGCTCGTCAAATCGGTG AATCACGTGCACAGGAAGCGTTACTTGCTCAACGTGGTGAGAAATCTAAATTAAGCCTTGAAGATTTATTCCAACAAATC CAAGAGGGCGATGTAAAAGAAATTAACTTAATTGTGAAAGCAGACGTACAAGGTTCTGTAGAAGCAATGGCAGCATCACT TCGTAAAATTGATGTTGAAGGTGTTAAAGTTAAAATTATCCATACAGGCGTAGGTGCGATTACAGAATCTGATATCATTT TAGCTTCTGCATCTAATGCAATTGTAATTGGATTTAACGTACGCCCAGATGTGAATGCGAAGCGTACAGCTGAATTAGAG AACGTTGATATTCGTTTACACCGTATTATTTATAAAGTAATCGAAGAGATCGAAGCAGCGATGCAAGGTATGTTAGATCC AGAATTCGAAGAAAAAGTAATCGGTCAAGCAGAAGTACGTCAAACGTTTAAAGTAACAAAAGTTGGAACAATCGCAGGTT GTTACGTAACAGACGGTAAAATTACACGTGATAGTGGCGTGCGTATTATCCGTGATGGCGTAGTAATTTTCGAAGGACAA CTTGATACGTTAAAACGTTTCAAAGACGACGTAAAAGAAGTTGCACAAAACTATGAGTGTGGTATTACAATTGAGAGATA TAATGATCTTAAAGAAGGGGACATTATTGAAGCATACATTATGGAAGAAGTGAAGCGATGA
Upstream 100 bases:
>100_bases GCGATTGGGAGAGATGAGCGAGTCGTTGTAGCTGTGTTAGATGAAGGCTTTGCGAAAAAGCTGCGTAGCATGCTCGATAC AAATTACCGGGGGTGAAGGT
Downstream 100 bases:
>100_bases TAATCGCTTCACTCTCATTCGAGTGTATGATTTACGATGTGCATTCTTTAAAAGAGAAACGAGCAATTTTGCAACGGGTG CTAACTCGAGTGAAGCAGCG
Product: translation initiation factor IF-2
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 686; Mature: 685
Protein sequence:
>686_residues MSKIRVHEYAKKHNISSKDLMTKLKEMNIEVSNHMTMLDDEVVNKLDNEYQAEKPSVADEFEVEEKVVRSKKNSNKKKKK GKGNEDKRQENFAGRQQTQTVETPDKITFSGSLTVGDLAKKLSKEPSEIIKKLFMLGIMATINQDLDKDTIELIANDYGI EVEEEVIVSETEFETFIDEQDDEENLKERPAVVTIMGHVDHGKTTLLDSIRNSKVTAGEAGGITQHIGAYQVEVNDKKIT FLDTPGHAAFTTMRARGAQVTDITILVVAADDGVMPQTVEAINHAKAAGVPIIVAVNKMDKPAANPDRVMQELTEYELVP EAWGGDTIFVPISAIQGEGIDNLLEMILLVSEVEEYKANPNRYATGTVIEAQLDKGKGTIATLLVQNGTLRVGDPIVVGT SFGRVRAMVSDIGRRVKVAGPSTPVEITGLNEVPQAGDRFMAFADEKKARQIGESRAQEALLAQRGEKSKLSLEDLFQQI QEGDVKEINLIVKADVQGSVEAMAASLRKIDVEGVKVKIIHTGVGAITESDIILASASNAIVIGFNVRPDVNAKRTAELE NVDIRLHRIIYKVIEEIEAAMQGMLDPEFEEKVIGQAEVRQTFKVTKVGTIAGCYVTDGKITRDSGVRIIRDGVVIFEGQ LDTLKRFKDDVKEVAQNYECGITIERYNDLKEGDIIEAYIMEEVKR
Sequences:
>Translated_686_residues MSKIRVHEYAKKHNISSKDLMTKLKEMNIEVSNHMTMLDDEVVNKLDNEYQAEKPSVADEFEVEEKVVRSKKNSNKKKKK GKGNEDKRQENFAGRQQTQTVETPDKITFSGSLTVGDLAKKLSKEPSEIIKKLFMLGIMATINQDLDKDTIELIANDYGI EVEEEVIVSETEFETFIDEQDDEENLKERPAVVTIMGHVDHGKTTLLDSIRNSKVTAGEAGGITQHIGAYQVEVNDKKIT FLDTPGHAAFTTMRARGAQVTDITILVVAADDGVMPQTVEAINHAKAAGVPIIVAVNKMDKPAANPDRVMQELTEYELVP EAWGGDTIFVPISAIQGEGIDNLLEMILLVSEVEEYKANPNRYATGTVIEAQLDKGKGTIATLLVQNGTLRVGDPIVVGT SFGRVRAMVSDIGRRVKVAGPSTPVEITGLNEVPQAGDRFMAFADEKKARQIGESRAQEALLAQRGEKSKLSLEDLFQQI QEGDVKEINLIVKADVQGSVEAMAASLRKIDVEGVKVKIIHTGVGAITESDIILASASNAIVIGFNVRPDVNAKRTAELE NVDIRLHRIIYKVIEEIEAAMQGMLDPEFEEKVIGQAEVRQTFKVTKVGTIAGCYVTDGKITRDSGVRIIRDGVVIFEGQ LDTLKRFKDDVKEVAQNYECGITIERYNDLKEGDIIEAYIMEEVKR >Mature_685_residues SKIRVHEYAKKHNISSKDLMTKLKEMNIEVSNHMTMLDDEVVNKLDNEYQAEKPSVADEFEVEEKVVRSKKNSNKKKKKG KGNEDKRQENFAGRQQTQTVETPDKITFSGSLTVGDLAKKLSKEPSEIIKKLFMLGIMATINQDLDKDTIELIANDYGIE VEEEVIVSETEFETFIDEQDDEENLKERPAVVTIMGHVDHGKTTLLDSIRNSKVTAGEAGGITQHIGAYQVEVNDKKITF LDTPGHAAFTTMRARGAQVTDITILVVAADDGVMPQTVEAINHAKAAGVPIIVAVNKMDKPAANPDRVMQELTEYELVPE AWGGDTIFVPISAIQGEGIDNLLEMILLVSEVEEYKANPNRYATGTVIEAQLDKGKGTIATLLVQNGTLRVGDPIVVGTS FGRVRAMVSDIGRRVKVAGPSTPVEITGLNEVPQAGDRFMAFADEKKARQIGESRAQEALLAQRGEKSKLSLEDLFQQIQ EGDVKEINLIVKADVQGSVEAMAASLRKIDVEGVKVKIIHTGVGAITESDIILASASNAIVIGFNVRPDVNAKRTAELEN VDIRLHRIIYKVIEEIEAAMQGMLDPEFEEKVIGQAEVRQTFKVTKVGTIAGCYVTDGKITRDSGVRIIRDGVVIFEGQL DTLKRFKDDVKEVAQNYECGITIERYNDLKEGDIIEAYIMEEVKR
Specific function: One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 7
COG id: COG0532
COG function: function code J; Translation initiation factor 2 (IF-2; GTPase)
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the IF-2 family [H]
Homologues:
Organism=Homo sapiens, GI53729339, Length=651, Percent_Identity=36.2519201228879, Blast_Score=389, Evalue=1e-108, Organism=Homo sapiens, GI53729337, Length=651, Percent_Identity=36.2519201228879, Blast_Score=389, Evalue=1e-108, Organism=Homo sapiens, GI84043963, Length=463, Percent_Identity=26.3498920086393, Blast_Score=122, Evalue=1e-27, Organism=Homo sapiens, GI157426893, Length=252, Percent_Identity=27.3809523809524, Blast_Score=75, Evalue=1e-13, Organism=Homo sapiens, GI34147630, Length=258, Percent_Identity=30.2325581395349, Blast_Score=69, Evalue=2e-11, Organism=Homo sapiens, GI18390331, Length=142, Percent_Identity=31.6901408450704, Blast_Score=66, Evalue=9e-11, Organism=Escherichia coli, GI1789559, Length=579, Percent_Identity=54.7495682210708, Blast_Score=612, Evalue=1e-176, Organism=Escherichia coli, GI2367247, Length=213, Percent_Identity=31.924882629108, Blast_Score=84, Evalue=4e-17, Organism=Escherichia coli, GI48994988, Length=137, Percent_Identity=36.4963503649635, Blast_Score=80, Evalue=3e-16, Organism=Escherichia coli, GI1788922, Length=233, Percent_Identity=29.6137339055794, Blast_Score=80, Evalue=4e-16, Organism=Escherichia coli, GI1790412, Length=234, Percent_Identity=32.9059829059829, Blast_Score=75, Evalue=2e-14, Organism=Escherichia coli, GI1789737, Length=234, Percent_Identity=32.9059829059829, Blast_Score=75, Evalue=2e-14, Organism=Caenorhabditis elegans, GI71994658, Length=539, Percent_Identity=37.291280148423, Blast_Score=328, Evalue=7e-90, Organism=Caenorhabditis elegans, GI212656558, Length=568, Percent_Identity=26.2323943661972, Blast_Score=129, Evalue=6e-30, Organism=Caenorhabditis elegans, GI17557151, Length=219, Percent_Identity=30.5936073059361, Blast_Score=82, Evalue=1e-15, Organism=Caenorhabditis elegans, GI17556456, Length=266, Percent_Identity=30.8270676691729, Blast_Score=80, Evalue=4e-15, Organism=Caenorhabditis elegans, GI25141371, Length=254, Percent_Identity=28.3464566929134, Blast_Score=72, Evalue=1e-12, Organism=Saccharomyces cerevisiae, GI6324550, Length=614, Percent_Identity=36.9706840390879, Blast_Score=361, Evalue=1e-100, Organism=Saccharomyces cerevisiae, GI6319282, Length=531, Percent_Identity=27.1186440677966, Blast_Score=134, Evalue=4e-32, Organism=Saccharomyces cerevisiae, GI6324761, Length=258, Percent_Identity=31.0077519379845, Blast_Score=78, Evalue=4e-15, Organism=Drosophila melanogaster, GI28572034, Length=653, Percent_Identity=36.7534456355283, Blast_Score=369, Evalue=1e-102, Organism=Drosophila melanogaster, GI24656849, Length=456, Percent_Identity=27.4122807017544, Blast_Score=128, Evalue=2e-29, Organism=Drosophila melanogaster, GI160714833, Length=122, Percent_Identity=54.0983606557377, Blast_Score=115, Evalue=1e-25, Organism=Drosophila melanogaster, GI78706572, Length=224, Percent_Identity=28.125, Blast_Score=75, Evalue=2e-13, Organism=Drosophila melanogaster, GI281363316, Length=263, Percent_Identity=30.7984790874525, Blast_Score=73, Evalue=8e-13, Organism=Drosophila melanogaster, GI17864358, Length=263, Percent_Identity=30.7984790874525, Blast_Score=73, Evalue=8e-13, Organism=Drosophila melanogaster, GI19921738, Length=248, Percent_Identity=31.0483870967742, Blast_Score=70, Evalue=6e-12, Organism=Drosophila melanogaster, GI17137380, Length=272, Percent_Identity=28.3088235294118, Blast_Score=70, Evalue=7e-12, Organism=Drosophila melanogaster, GI19922690, Length=230, Percent_Identity=27.8260869565217, Blast_Score=67, Evalue=3e-11,
Paralogues:
None
Copy number: 1150 Molecules/Cell In: Glucose minimal media [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR006847 - InterPro: IPR000795 - InterPro: IPR005225 - InterPro: IPR000178 - InterPro: IPR015760 - InterPro: IPR023115 - InterPro: IPR004161 - InterPro: IPR009000 [H]
Pfam domain/function: PF00009 GTP_EFTU; PF03144 GTP_EFTU_D2; PF11987 IF-2; PF04760 IF2_N [H]
EC number: NA
Molecular weight: Translated: 75725; Mature: 75594
Theoretical pI: Translated: 4.76; Mature: 4.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKIRVHEYAKKHNISSKDLMTKLKEMNIEVSNHMTMLDDEVVNKLDNEYQAEKPSVADE CCCCCHHHHHHHCCCCHHHHHHHHHHCCEEHHCCEEHHHHHHHHHHCHHHCCCCCCCCHH FEVEEKVVRSKKNSNKKKKKGKGNEDKRQENFAGRQQTQTVETPDKITFSGSLTVGDLAK HHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHH KLSKEPSEIIKKLFMLGIMATINQDLDKDTIELIANDYGIEVEEEVIVSETEFETFIDEQ HHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHEEECHHHHHHCCCC DDEENLKERPAVVTIMGHVDHGKTTLLDSIRNSKVTAGEAGGITQHIGAYQVEVNDKKIT CCHHHHHHCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHCCEEEEEECCCEEE FLDTPGHAAFTTMRARGAQVTDITILVVAADDGVMPQTVEAINHAKAAGVPIIVAVNKMD EEECCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCC KPAANPDRVMQELTEYELVPEAWGGDTIFVPISAIQGEGIDNLLEMILLVSEVEEYKANP CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCC NRYATGTVIEAQLDKGKGTIATLLVQNGTLRVGDPIVVGTSFGRVRAMVSDIGRRVKVAG CCEECCEEEEEEECCCCCEEEEEEEECCEEEECCEEEEECCHHHHHHHHHHHCCEEEECC PSTPVEITGLNEVPQAGDRFMAFADEKKARQIGESRAQEALLAQRGEKSKLSLEDLFQQI CCCCEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH QEGDVKEINLIVKADVQGSVEAMAASLRKIDVEGVKVKIIHTGVGAITESDIILASASNA HCCCCEEEEEEEEECCCCHHHHHHHHHHHEECCCEEEEEEEECCCCEECCCEEEEECCCE IVIGFNVRPDVNAKRTAELENVDIRLHRIIYKVIEEIEAAMQGMLDPEFEEKVIGQAEVR EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHH QTFKVTKVGTIAGCYVTDGKITRDSGVRIIRDGVVIFEGQLDTLKRFKDDVKEVAQNYEC HHHEEEEECEEEEEEEECCEEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHHHCCCCC GITIERYNDLKEGDIIEAYIMEEVKR CEEEECCCCCCCCCHHHHHHHHHHCC >Mature Secondary Structure SKIRVHEYAKKHNISSKDLMTKLKEMNIEVSNHMTMLDDEVVNKLDNEYQAEKPSVADE CCCCHHHHHHHCCCCHHHHHHHHHHCCEEHHCCEEHHHHHHHHHHCHHHCCCCCCCCHH FEVEEKVVRSKKNSNKKKKKGKGNEDKRQENFAGRQQTQTVETPDKITFSGSLTVGDLAK HHHHHHHHHHHHCCCHHHHCCCCCCHHHHHHHCCCCCCCCCCCCCCEEEECCCCHHHHHH KLSKEPSEIIKKLFMLGIMATINQDLDKDTIELIANDYGIEVEEEVIVSETEFETFIDEQ HHCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCHHHEEECHHHHHHCCCC DDEENLKERPAVVTIMGHVDHGKTTLLDSIRNSKVTAGEAGGITQHIGAYQVEVNDKKIT CCHHHHHHCCEEEEEEEECCCCHHHHHHHHCCCCCCCCCCCCCHHHCCEEEEEECCCEEE FLDTPGHAAFTTMRARGAQVTDITILVVAADDGVMPQTVEAINHAKAAGVPIIVAVNKMD EEECCCCHHHHHHHHCCCEEEEEEEEEEECCCCCCHHHHHHHHHHHHCCCEEEEEEECCC KPAANPDRVMQELTEYELVPEAWGGDTIFVPISAIQGEGIDNLLEMILLVSEVEEYKANP CCCCCHHHHHHHHHHHCCCCCCCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHCCCC NRYATGTVIEAQLDKGKGTIATLLVQNGTLRVGDPIVVGTSFGRVRAMVSDIGRRVKVAG CCEECCEEEEEEECCCCCEEEEEEEECCEEEECCEEEEECCHHHHHHHHHHHCCEEEECC PSTPVEITGLNEVPQAGDRFMAFADEKKARQIGESRAQEALLAQRGEKSKLSLEDLFQQI CCCCEEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHH QEGDVKEINLIVKADVQGSVEAMAASLRKIDVEGVKVKIIHTGVGAITESDIILASASNA HCCCCEEEEEEEEECCCCHHHHHHHHHHHEECCCEEEEEEEECCCCEECCCEEEEECCCE IVIGFNVRPDVNAKRTAELENVDIRLHRIIYKVIEEIEAAMQGMLDPEFEEKVIGQAEVR EEEEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHCCHHHHH QTFKVTKVGTIAGCYVTDGKITRDSGVRIIRDGVVIFEGQLDTLKRFKDDVKEVAQNYEC HHHEEEEECEEEEEEEECCEEECCCCCEEEECCEEEEECCHHHHHHHHHHHHHHHCCCCC GITIERYNDLKEGDIIEAYIMEEVKR CEEEECCCCCCCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Hydrolase; In phosphorus-containing anhydrides [C]
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA