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The map label for this gene is sun [H]

Identifier: 52141623

GI number: 52141623

Start: 3761795

End: 3763129

Strand: Reverse

Name: sun [H]

Synonym: BCZK3624

Alternate gene names: 52141623

Gene position: 3763129-3761795 (Counterclockwise)

Preceding gene: 52141620

Following gene: 52141624

Centisome position: 70.99

GC content: 36.48

Gene sequence:

>1335_bases
ATGAGACAAAATGTTCGTGAATTAGCTCTTGATGGTTTAATTCAAGTAGAAAAAAGTGGTGCATACAGTAACTTACTTTT
AAATAATCTAATTGAAAAAAGTACAATTGATAGAAAAGATATTGGTTTATTAACTGAAATTGTATATGGAACAATCCAAC
GTCGTGACACATTAGATTATTATTTACAGCCTTTTTTAAAAAAGAAAGTTGAAGCATGGGTAAGAGTATTACTTCGCTTA
TCTTTATATCAAATGATTTATTTAGACCGAGTGCCCGAAAGAGCGGCTATTCATGAAGCGGTTGAGATTGCAAAGCGTCG
CGGACATAAAGGAATTGCTGGTATGGTAAACGGTGTATTACGTTCGATTCAAAGAGAAGGTGTACCTTCTGTAGATGAAA
TCAAAGATCCAGTAGAGCGTTTGGCAATTGCAACAAGTCATCCAGTTTGGCTTGTCCAAGAGTGGACTTCAGAATATGGT
TTAGAAACTGCTGAGAAAATGTGTGAAGTGAACATGTTACCGCCTGTACCAACAGCGCGTGTAAATGTTGATAAAATAAC
AGTAGAAGAAGCAATTACATTATTGGCTAGTGAAGGTATAGAAGCGAAGCGTGGCGATTTATCAGATGATGCAATTCAAA
TTGAAAAAGGAAATGTAGCGCACACAGATGCGTTTAAAAAAGGTTTTCTTTCTATTCAAGATGAAAGTTCTATGCTGGTA
GCACGTGCCTTAGAACCAGATGAGGGAGATGTAGTTCTTGATAGTTGTGCTGCTCCAGGCGGAAAAACAACGCATATTGC
AGAGCGATTAAAAGGAACTGGTCAAGTCATGTCCCTTGATTTACATGCACACAAAGTACGCTTAATTAAACAACAAGCAG
AGCGACTTGGTTTAGAAAATGTCGAAACTAAGGCATTAGATGCTAGAAAAGTGCAAGAACACTTTGCAAATGAAACATTT
GATAAAATATTAGTAGATGCCCCATGTTCTGGATTTGGTGTAATTAGACGTAAGCCTGATATTAAGTTAGGTAAAGATAA
AGGCGATAGTGAAAGATTATCGACAATCCAATTTGCAATACTAGAAAAAATCGCACCGTTATTAAAACAAGGTGGTCGCC
TTGTTTATAGTACGTGCACAATTGAGAAAATAGAAAATGAACAAGTAATAGAACGATTTTTACAAGAGCATCCGGAGTTT
GAGTGGGATACTACGATAAAAGATCGTATGCCAGAAAAGCTAAGTCCGTATATGGATGAAGGTCAAGTACAAATTTTACC
GCATTATTTTGCAACAGATGGCTTTTATATTGCTTGTTTAAGGAAGAAGGTGTAG

Upstream 100 bases:

>100_bases
AAATTACTGAATTGCAACCTTCTGGTAAAAAGCGTATGAGTTGTTCGCAATTTTTACGTGGCACAAAACCTGAAATTGGA
ACGAAGTTAGGAGAAAATGC

Downstream 100 bases:

>100_bases
CATCGTGGAAACGACTGTGAGAAAACAAAAGAAAAACTTAGAAACGAAAAAACCATCAATTTACTCTTTACAACTTCATG
AAATGCAAGATTGGTTAAAG

Product: sun protein

Products: NA

Alternate protein names: rRNA (cytosine-C(5)-)-methyltransferase rsmB [H]

Number of amino acids: Translated: 444; Mature: 444

Protein sequence:

>444_residues
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSTIDRKDIGLLTEIVYGTIQRRDTLDYYLQPFLKKKVEAWVRVLLRL
SLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVLRSIQREGVPSVDEIKDPVERLAIATSHPVWLVQEWTSEYG
LETAEKMCEVNMLPPVPTARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKGNVAHTDAFKKGFLSIQDESSMLV
ARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQEHFANETF
DKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSTIQFAILEKIAPLLKQGGRLVYSTCTIEKIENEQVIERFLQEHPEF
EWDTTIKDRMPEKLSPYMDEGQVQILPHYFATDGFYIACLRKKV

Sequences:

>Translated_444_residues
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSTIDRKDIGLLTEIVYGTIQRRDTLDYYLQPFLKKKVEAWVRVLLRL
SLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVLRSIQREGVPSVDEIKDPVERLAIATSHPVWLVQEWTSEYG
LETAEKMCEVNMLPPVPTARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKGNVAHTDAFKKGFLSIQDESSMLV
ARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQEHFANETF
DKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSTIQFAILEKIAPLLKQGGRLVYSTCTIEKIENEQVIERFLQEHPEF
EWDTTIKDRMPEKLSPYMDEGQVQILPHYFATDGFYIACLRKKV
>Mature_444_residues
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSTIDRKDIGLLTEIVYGTIQRRDTLDYYLQPFLKKKVEAWVRVLLRL
SLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVLRSIQREGVPSVDEIKDPVERLAIATSHPVWLVQEWTSEYG
LETAEKMCEVNMLPPVPTARVNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKGNVAHTDAFKKGFLSIQDESSMLV
ARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKVRLIKQQAERLGLENVETKALDARKVQEHFANETF
DKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSTIQFAILEKIAPLLKQGGRLVYSTCTIEKIENEQVIERFLQEHPEF
EWDTTIKDRMPEKLSPYMDEGQVQILPHYFATDGFYIACLRKKV

Specific function: Unknown

COG id: COG0144

COG function: function code J; tRNA and rRNA cytosine-C5-methylases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the methyltransferase superfamily. RsmB/NOP family [H]

Homologues:

Organism=Homo sapiens, GI76150625, Length=357, Percent_Identity=30.5322128851541, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI76150623, Length=357, Percent_Identity=30.5322128851541, Blast_Score=131, Evalue=1e-30,
Organism=Homo sapiens, GI32698918, Length=181, Percent_Identity=38.121546961326, Blast_Score=115, Evalue=6e-26,
Organism=Homo sapiens, GI39995082, Length=275, Percent_Identity=29.4545454545455, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI301336155, Length=275, Percent_Identity=29.4545454545455, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI23199998, Length=297, Percent_Identity=27.6094276094276, Blast_Score=90, Evalue=4e-18,
Organism=Homo sapiens, GI270288818, Length=233, Percent_Identity=30.0429184549356, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI8922322, Length=297, Percent_Identity=27.6094276094276, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI270288816, Length=233, Percent_Identity=30.0429184549356, Blast_Score=90, Evalue=5e-18,
Organism=Homo sapiens, GI11545785, Length=173, Percent_Identity=34.6820809248555, Blast_Score=85, Evalue=2e-16,
Organism=Homo sapiens, GI40316918, Length=197, Percent_Identity=27.9187817258883, Blast_Score=72, Evalue=1e-12,
Organism=Escherichia coli, GI2367212, Length=446, Percent_Identity=32.2869955156951, Blast_Score=200, Evalue=2e-52,
Organism=Escherichia coli, GI87081985, Length=271, Percent_Identity=32.4723247232472, Blast_Score=139, Evalue=5e-34,
Organism=Caenorhabditis elegans, GI17536757, Length=238, Percent_Identity=34.8739495798319, Blast_Score=122, Evalue=3e-28,
Organism=Caenorhabditis elegans, GI71998419, Length=228, Percent_Identity=32.4561403508772, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI115534021, Length=228, Percent_Identity=32.4561403508772, Blast_Score=97, Evalue=2e-20,
Organism=Caenorhabditis elegans, GI25143471, Length=180, Percent_Identity=34.4444444444444, Blast_Score=89, Evalue=6e-18,
Organism=Saccharomyces cerevisiae, GI6324268, Length=308, Percent_Identity=28.5714285714286, Blast_Score=115, Evalue=1e-26,
Organism=Saccharomyces cerevisiae, GI6319447, Length=183, Percent_Identity=33.879781420765, Blast_Score=93, Evalue=9e-20,
Organism=Saccharomyces cerevisiae, GI6324306, Length=282, Percent_Identity=25.531914893617, Blast_Score=72, Evalue=1e-13,
Organism=Drosophila melanogaster, GI22024126, Length=227, Percent_Identity=33.0396475770925, Blast_Score=114, Evalue=1e-25,
Organism=Drosophila melanogaster, GI21355201, Length=190, Percent_Identity=35.7894736842105, Blast_Score=105, Evalue=4e-23,
Organism=Drosophila melanogaster, GI24668781, Length=234, Percent_Identity=32.0512820512821, Blast_Score=99, Evalue=8e-21,
Organism=Drosophila melanogaster, GI21356513, Length=234, Percent_Identity=32.0512820512821, Blast_Score=98, Evalue=1e-20,
Organism=Drosophila melanogaster, GI21356579, Length=232, Percent_Identity=29.3103448275862, Blast_Score=91, Evalue=1e-18,
Organism=Drosophila melanogaster, GI19920494, Length=210, Percent_Identity=33.8095238095238, Blast_Score=82, Evalue=7e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001678
- InterPro:   IPR018314
- InterPro:   IPR006027
- InterPro:   IPR004573 [H]

Pfam domain/function: PF01189 Nol1_Nop2_Fmu; PF01029 NusB [H]

EC number: 2.1.1.-

Molecular weight: Translated: 50037; Mature: 50037

Theoretical pI: Translated: 6.05; Mature: 6.05

Prosite motif: PS01153 NOL1_NOP2_SUN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSTIDRKDIGLLTEIVYGTIQRRDTLDY
CCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH
YLQPFLKKKVEAWVRVLLRLSLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RSIQREGVPSVDEIKDPVERLAIATSHPVWLVQEWTSEYGLETAEKMCEVNMLPPVPTAR
HHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCHHHHHHHHHCCCCCCCCCCC
VNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKGNVAHTDAFKKGFLSIQDESSMLV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCEEECCCCCEEE
ARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKVRLIKQQAERLGLEN
HCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCC
VETKALDARKVQEHFANETFDKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSTIQFAI
CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHH
LEKIAPLLKQGGRLVYSTCTIEKIENEQVIERFLQEHPEFEWDTTIKDRMPEKLSPYMDE
HHHHHHHHHHCCEEEEEEEHHHHCCCHHHHHHHHHHCCCCCCCCCHHHCCCHHCCCCCCC
GQVQILPHYFATDGFYIACLRKKV
CCEEEECHHHCCCCEEEEEECCCC
>Mature Secondary Structure
MRQNVRELALDGLIQVEKSGAYSNLLLNNLIEKSTIDRKDIGLLTEIVYGTIQRRDTLDY
CCCCHHHHHHHHHHEEECCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHCCHHHH
YLQPFLKKKVEAWVRVLLRLSLYQMIYLDRVPERAAIHEAVEIAKRRGHKGIAGMVNGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHH
RSIQREGVPSVDEIKDPVERLAIATSHPVWLVQEWTSEYGLETAEKMCEVNMLPPVPTAR
HHHHHCCCCCHHHHHHHHHHHHHHCCCCEEEHHHHHHHHCHHHHHHHHHCCCCCCCCCCC
VNVDKITVEEAITLLASEGIEAKRGDLSDDAIQIEKGNVAHTDAFKKGFLSIQDESSMLV
CCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCCHHHHHHHCCEEECCCCCEEE
ARALEPDEGDVVLDSCAAPGGKTTHIAERLKGTGQVMSLDLHAHKVRLIKQQAERLGLEN
HCCCCCCCCCEEEECCCCCCCCHHHHHHHHCCCCCEEEEEHHHHHHHHHHHHHHHCCCCC
VETKALDARKVQEHFANETFDKILVDAPCSGFGVIRRKPDIKLGKDKGDSERLSTIQFAI
CHHHHHHHHHHHHHHHHHHHHHHEECCCCCCCCCEECCCCCCCCCCCCCHHHHHHHHHHH
LEKIAPLLKQGGRLVYSTCTIEKIENEQVIERFLQEHPEFEWDTTIKDRMPEKLSPYMDE
HHHHHHHHHHCCEEEEEEEHHHHCCCHHHHHHHHHHCCCCCCCCCHHHCCCHHCCCCCCC
GQVQILPHYFATDGFYIACLRKKV
CCEEEECHHHCCCCEEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9534248; 9384377; 9086272 [H]