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The map label for this gene is yknZ [H]

Identifier: 52140310

GI number: 52140310

Start: 5044202

End: 5045404

Strand: Reverse

Name: yknZ [H]

Synonym: BCZK4950

Alternate gene names: 52140310

Gene position: 5045404-5044202 (Counterclockwise)

Preceding gene: 52140309

Following gene: 52140311

Centisome position: 95.18

GC content: 37.82

Gene sequence:

>1203_bases
ATGAGTTTACTAGATAGTATAAAAATTGCCCTGTCTTCTATTTTAGCTCATAAACTGCGTTCAGCTCTTACGATGCTCGG
TATTATTATCGGTGTTGGTTCCATTATTACTGTCGTTGCGATTGGGCAAGGCGGGGAAGCAATGCTGAAGTCGAAATTCG
CAGGTTCTGGTGGTAATAATCTTATGCCAATTCAATTTCAACCAGATATTAATGATGAGTTTGCTATGGGTGGATTTGAA
ATGCCAAAGTTAACGGAAGAGGATATTTTGGAAGTAAAACAAGTGAAAGATGTTTCACACGTTATTACGACAAACCGGAA
TTCAGAGGTGCTTGATGTAAATGATAAAAAGGCAAATCTGAATGTTATTGGTCTTGATAATGAATATTTTGCAGTTAATA
AAGTAAAGGTCGTAAAGGGACGTACTTTAAGTGAATCAGATATTACTCATGCAAATAACGTTGTGATGATTAGCACAAAA
ACAGAAGAAACGTTATTTAAGGACGTAAACCCAGTTGGACAAATTATTGAGATGAAGGGGCAGCCAATGCAAATTGTTGG
TGTGTATACATCTGATAATGAGTTTATGGGATTTGAAATGGAAGAAGCGCTAATCCCTCTTACGTTATGGCCTGTTTTAT
ACGGAACAGACGAGATTCAAAATATCGCAATTCAAGCTAAAAATGTAGACGATTTAGAAGCAGCTGGGAAACAGGCTGTT
GATGTATTAAATAGTCGTAAGCCAAGTGAAATTCCAGGTAAATATGAACTGGTGAACTTAAAAGAATTCCAAGAAAATGT
TTCTAAAGTAACTAACATTATGACGATGATTATCGGTGGTATCGCGGGTATTTCACTAGTCGTTGGTGGTATTGGCGTTA
TGAACATTATGCTCGTATCTGTAACGGAGCGTACGCGCGAAATTGGGATACGTAAAGCACTTGGAGCAACGCGTAGTAAA
ATCTTATTACAGTTTTTAATTGAAGCAGTTATGTTAACACTTCTAGGTGGTTTAATCGGAATTGGTCTTGGATACGGCGG
AGCATATATCGTTTCCACATTCGCAAAATGGCCACCACTCGTTTCATGGGAAGTTGTCGTTGGAGGCGTACTGTTCTCTA
TGACACTCGGTATTATCTTTGGATTAATTCCAGCAAATAAAGCTGCGAAATTAGATCCAATTGAAGCACTTCGTTATGAG
TAA

Upstream 100 bases:

>100_bases
CAATTGTTATGGTTACGCATGAAGAGGAAGTAGCAGCGTATTCTTCCCGCCGCATTGTATTGCGAGATGGGAAAATTACA
GAAGATAGAAGGTGTGCGGT

Downstream 100 bases:

>100_bases
GTAATCGTGTAGTAGAACTACACACTACCGTTCTAGTGGGCGGTTCGTAGCCTCTATATGAGGAAGTGAACCGCCCGTTA
GAACGGGTTATATAAATAGA

Product: ABC transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 400; Mature: 399

Protein sequence:

>400_residues
MSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKFAGSGGNNLMPIQFQPDINDEFAMGGFE
MPKLTEEDILEVKQVKDVSHVITTNRNSEVLDVNDKKANLNVIGLDNEYFAVNKVKVVKGRTLSESDITHANNVVMISTK
TEETLFKDVNPVGQIIEMKGQPMQIVGVYTSDNEFMGFEMEEALIPLTLWPVLYGTDEIQNIAIQAKNVDDLEAAGKQAV
DVLNSRKPSEIPGKYELVNLKEFQENVSKVTNIMTMIIGGIAGISLVVGGIGVMNIMLVSVTERTREIGIRKALGATRSK
ILLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE

Sequences:

>Translated_400_residues
MSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKFAGSGGNNLMPIQFQPDINDEFAMGGFE
MPKLTEEDILEVKQVKDVSHVITTNRNSEVLDVNDKKANLNVIGLDNEYFAVNKVKVVKGRTLSESDITHANNVVMISTK
TEETLFKDVNPVGQIIEMKGQPMQIVGVYTSDNEFMGFEMEEALIPLTLWPVLYGTDEIQNIAIQAKNVDDLEAAGKQAV
DVLNSRKPSEIPGKYELVNLKEFQENVSKVTNIMTMIIGGIAGISLVVGGIGVMNIMLVSVTERTREIGIRKALGATRSK
ILLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE
>Mature_399_residues
SLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKFAGSGGNNLMPIQFQPDINDEFAMGGFEM
PKLTEEDILEVKQVKDVSHVITTNRNSEVLDVNDKKANLNVIGLDNEYFAVNKVKVVKGRTLSESDITHANNVVMISTKT
EETLFKDVNPVGQIIEMKGQPMQIVGVYTSDNEFMGFEMEEALIPLTLWPVLYGTDEIQNIAIQAKNVDDLEAAGKQAVD
VLNSRKPSEIPGKYELVNLKEFQENVSKVTNIMTMIIGGIAGISLVVGGIGVMNIMLVSVTERTREIGIRKALGATRSKI
LLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPLVSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE

Specific function: Unknown

COG id: COG0577

COG function: function code V; ABC-type antimicrobial peptide transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ABC-4 integral membrane protein family [H]

Homologues:

Organism=Escherichia coli, GI1787105, Length=407, Percent_Identity=31.6953316953317, Blast_Score=164, Evalue=8e-42,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003838 [H]

Pfam domain/function: PF02687 FtsX [H]

EC number: NA

Molecular weight: Translated: 43237; Mature: 43106

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.2 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.0 %Met     (Mature Protein)
4.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKFAGSGGNN
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCCCC
LMPIQFQPDINDEFAMGGFEMPKLTEEDILEVKQVKDVSHVITTNRNSEVLDVNDKKANL
EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCE
NVIGLDNEYFAVNKVKVVKGRTLSESDITHANNVVMISTKTEETLFKDVNPVGQIIEMKG
EEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHCCCHHHHHHHCCC
QPMQIVGVYTSDNEFMGFEMEEALIPLTLWPVLYGTDEIQNIAIQAKNVDDLEAAGKQAV
CCEEEEEEEECCCCEECCCHHHHEECHHHHHHHHCCHHHHEEEEEECCCHHHHHHHHHHH
DVLNSRKPSEIPGKYELVNLKEFQENVSKVTNIMTMIIGGIAGISLVVGGIGVMNIMLVS
HHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTERTREIGIRKALGATRSKILLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
VSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCC
>Mature Secondary Structure 
SLLDSIKIALSSILAHKLRSALTMLGIIIGVGSIITVVAIGQGGEAMLKSKFAGSGGNN
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEECCCCHHHHHHHCCCCCCCC
LMPIQFQPDINDEFAMGGFEMPKLTEEDILEVKQVKDVSHVITTNRNSEVLDVNDKKANL
EEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCEEEECCCCCCE
NVIGLDNEYFAVNKVKVVKGRTLSESDITHANNVVMISTKTEETLFKDVNPVGQIIEMKG
EEEECCCCEEEEEEEEEEECCCCCCCCCCCCCCEEEEEECCHHHHHHCCCHHHHHHHCCC
QPMQIVGVYTSDNEFMGFEMEEALIPLTLWPVLYGTDEIQNIAIQAKNVDDLEAAGKQAV
CCEEEEEEEECCCCEECCCHHHHEECHHHHHHHHCCHHHHEEEEEECCCHHHHHHHHHHH
DVLNSRKPSEIPGKYELVNLKEFQENVSKVTNIMTMIIGGIAGISLVVGGIGVMNIMLVS
HHHHCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VTERTREIGIRKALGATRSKILLQFLIEAVMLTLLGGLIGIGLGYGGAYIVSTFAKWPPL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
VSWEVVVGGVLFSMTLGIIFGLIPANKAAKLDPIEALRYE
EEHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]