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The map label for this gene is yadE [H]

Identifier: 52140286

GI number: 52140286

Start: 5075822

End: 5076943

Strand: Reverse

Name: yadE [H]

Synonym: BCZK4976

Alternate gene names: 52140286

Gene position: 5076943-5075822 (Counterclockwise)

Preceding gene: 52140284

Following gene: 52140285

Centisome position: 95.77

GC content: 28.16

Gene sequence:

>1122_bases
TTGGAATTGAGGGCAAGAAAGCGAAAGCAAAGTAAATTAAAGTTTATAGGGATTACTCTTTTTATAGGGATAGTATTGGT
ATGGAGCACTTTAACTGTATTTAAGATGGGGAATAAGGAAGTTATTGGCTCTGGTATTACAGATCAAAAAATCCCAGTAT
TAATGTATCATCATTTACTTAAAAATAACGAAAAACAATCTCAGCCAAATTTTAAGAATAAAGGAACAGTTTTAACAGTA
GAACAATTTGAAAAGCAAATGAAATATTTAGAAGATAATGATTACCATACTTTAACGTTACAAGAATTTGAAGATTTTAT
AGAGAGAGGGAGAAAACTTCCAGAAAAAAGTGTGCTAATTACATTTGATGATGGTTTGAAATCTAATTATATATATGCAT
ATCCAATCTTAAAAAAATATCAAATGCATGCAGTTGCATTCGTAATTACGTCTAGATTAACAGAGGAAACAGAAAATTTT
AATCCAAGAAAATTACAGTCATTGAGTAAAACGGAACTTGATCAAATGCGAGATGTATTTGAAATAGGTAGCCATACAAA
TAATCTTCATAATCGTTCAAATAGAGAGGTAGATCTAATAGATAAAGAGCAGGAAACTGTAAAAAAAGATATTCAAGAGA
GTAAGGAAATTTTAAAGACAGACTATTTTTGTTACCCTTTTGGAATTTATAATCAAAAATCAATTGAAATTTTAAATGAT
TTAAAATTTCATTTAGCATTTACAACAAATGAGGGATATGCAACTCAGGAAAATAAAAGACTAGAAATCAATCGTTTTGG
TATCTCTCCTCAAGTGGATATGAAAAAATTTGAGGATATTGTTTCGGGGAAAGTCAAGGTAACTAAAGTTAATCATGTTT
CAATTCAACAAAATAGTGGGAATATGTTGAGAGTGGAATCAAAAGCTACAGGTGAAGAATTAAAATACGCTTACTATATT
TATAAAGATAATGAAATTCTTGAAAAAATTAACTATAGTTCGGAGAGTTCGCTTACTTATAAAATAAAAAAATCAGGTGA
ATATAAGATAAAGGTATTTATACAAGATAAAAACGGTGATAAAGATAGTAAAGAAACACCTAAATTACAGGTTAGTATAT
AA

Upstream 100 bases:

>100_bases
TACAAAAGAGTTAAAAGTGGAGAAGTAATCTCCACTTTTATTTTGGAATGATGTTTTCATGATAACTACCAGTTAAAAAT
TTTAGAGGAAGTGTTTCAAG

Downstream 100 bases:

>100_bases
GTAACAATTTATTTTTAAACATTTGATAGGTAATATTAAAAAATAAAAAGAGGTTGAATTCCCAATGGGAGATCGGCCTC
TTTTTATTTTTTAATAAGGA

Product: deacetylase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 373; Mature: 373

Protein sequence:

>373_residues
MELRARKRKQSKLKFIGITLFIGIVLVWSTLTVFKMGNKEVIGSGITDQKIPVLMYHHLLKNNEKQSQPNFKNKGTVLTV
EQFEKQMKYLEDNDYHTLTLQEFEDFIERGRKLPEKSVLITFDDGLKSNYIYAYPILKKYQMHAVAFVITSRLTEETENF
NPRKLQSLSKTELDQMRDVFEIGSHTNNLHNRSNREVDLIDKEQETVKKDIQESKEILKTDYFCYPFGIYNQKSIEILND
LKFHLAFTTNEGYATQENKRLEINRFGISPQVDMKKFEDIVSGKVKVTKVNHVSIQQNSGNMLRVESKATGEELKYAYYI
YKDNEILEKINYSSESSLTYKIKKSGEYKIKVFIQDKNGDKDSKETPKLQVSI

Sequences:

>Translated_373_residues
MELRARKRKQSKLKFIGITLFIGIVLVWSTLTVFKMGNKEVIGSGITDQKIPVLMYHHLLKNNEKQSQPNFKNKGTVLTV
EQFEKQMKYLEDNDYHTLTLQEFEDFIERGRKLPEKSVLITFDDGLKSNYIYAYPILKKYQMHAVAFVITSRLTEETENF
NPRKLQSLSKTELDQMRDVFEIGSHTNNLHNRSNREVDLIDKEQETVKKDIQESKEILKTDYFCYPFGIYNQKSIEILND
LKFHLAFTTNEGYATQENKRLEINRFGISPQVDMKKFEDIVSGKVKVTKVNHVSIQQNSGNMLRVESKATGEELKYAYYI
YKDNEILEKINYSSESSLTYKIKKSGEYKIKVFIQDKNGDKDSKETPKLQVSI
>Mature_373_residues
MELRARKRKQSKLKFIGITLFIGIVLVWSTLTVFKMGNKEVIGSGITDQKIPVLMYHHLLKNNEKQSQPNFKNKGTVLTV
EQFEKQMKYLEDNDYHTLTLQEFEDFIERGRKLPEKSVLITFDDGLKSNYIYAYPILKKYQMHAVAFVITSRLTEETENF
NPRKLQSLSKTELDQMRDVFEIGSHTNNLHNRSNREVDLIDKEQETVKKDIQESKEILKTDYFCYPFGIYNQKSIEILND
LKFHLAFTTNEGYATQENKRLEINRFGISPQVDMKKFEDIVSGKVKVTKVNHVSIQQNSGNMLRVESKATGEELKYAYYI
YKDNEILEKINYSSESSLTYKIKKSGEYKIKVFIQDKNGDKDSKETPKLQVSI

Specific function: Unknown

COG id: COG0726

COG function: function code G; Predicted xylanase/chitin deacetylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786322, Length=227, Percent_Identity=37.4449339207048, Blast_Score=166, Evalue=2e-42,
Organism=Escherichia coli, GI1787260, Length=206, Percent_Identity=25.7281553398058, Blast_Score=68, Evalue=8e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011330
- InterPro:   IPR002509 [H]

Pfam domain/function: PF01522 Polysacc_deac_1 [H]

EC number: NA

Molecular weight: Translated: 43602; Mature: 43602

Theoretical pI: Translated: 9.45; Mature: 9.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MELRARKRKQSKLKFIGITLFIGIVLVWSTLTVFKMGNKEVIGSGITDQKIPVLMYHHLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHEECCCCCCCCCHHHHHHHHH
KNNEKQSQPNFKNKGTVLTVEQFEKQMKYLEDNDYHTLTLQEFEDFIERGRKLPEKSVLI
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCEEE
TFDDGLKSNYIYAYPILKKYQMHAVAFVITSRLTEETENFNPRKLQSLSKTELDQMRDVF
EECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EIGSHTNNLHNRSNREVDLIDKEQETVKKDIQESKEILKTDYFCYPFGIYNQKSIEILND
HHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHCC
LKFHLAFTTNEGYATQENKRLEINRFGISPQVDMKKFEDIVSGKVKVTKVNHVSIQQNSG
CEEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEEEEEECCC
NMLRVESKATGEELKYAYYIYKDNEILEKINYSSESSLTYKIKKSGEYKIKVFIQDKNGD
CEEEEECCCCCCCEEEEEEEEECCHHHHHCCCCCCCCEEEEEECCCCEEEEEEEECCCCC
KDSKETPKLQVSI
CCCCCCCCEEEEC
>Mature Secondary Structure
MELRARKRKQSKLKFIGITLFIGIVLVWSTLTVFKMGNKEVIGSGITDQKIPVLMYHHLL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCHHEECCCCCCCCCHHHHHHHHH
KNNEKQSQPNFKNKGTVLTVEQFEKQMKYLEDNDYHTLTLQEFEDFIERGRKLPEKSVLI
CCCCCCCCCCCCCCCCEEEHHHHHHHHHHHCCCCEEEEEHHHHHHHHHHHHCCCCCCEEE
TFDDGLKSNYIYAYPILKKYQMHAVAFVITSRLTEETENFNPRKLQSLSKTELDQMRDVF
EECCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH
EIGSHTNNLHNRSNREVDLIDKEQETVKKDIQESKEILKTDYFCYPFGIYNQKSIEILND
HHCCCCCCCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHCC
LKFHLAFTTNEGYATQENKRLEINRFGISPQVDMKKFEDIVSGKVKVTKVNHVSIQQNSG
CEEEEEEEECCCCCCCCCCEEEEEEECCCCCCHHHHHHHHHCCCEEEEEEEEEEEEECCC
NMLRVESKATGEELKYAYYIYKDNEILEKINYSSESSLTYKIKKSGEYKIKVFIQDKNGD
CEEEEECCCCCCCEEEEEEEEECCHHHHHCCCCCCCCEEEEEECCCCEEEEEEEECCCCC
KDSKETPKLQVSI
CCCCCCCCEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8202364; 9278503 [H]