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The map label for this gene is ywdJ [H]

Identifier: 52140169

GI number: 52140169

Start: 5201388

End: 5202671

Strand: Direct

Name: ywdJ [H]

Synonym: BCZK5093

Alternate gene names: 52140169

Gene position: 5201388-5202671 (Clockwise)

Preceding gene: 52140170

Following gene: 52140168

Centisome position: 98.12

GC content: 39.1

Gene sequence:

>1284_bases
ATGAAGACATTTCTTTCCGCCTTACAATGGGCACTATTTATTTTAGCTGGAAGCCTTATTGTACCAATTAGTGTCGCAAC
TAGTTATGGCCTAGATGGCGCTGAAGCTATTGCATTCGTACAGAGAACATTATTTGTTCTTGGCTTTGCTGGCTTATTGC
AAGCTATATTTGGACATAAACTTCCTATTCAAGAAGGTCCTGCAGGCCTTTGGTGGGGCATTTTCTCCCTTTATGCAAGT
TTAGGTGTCGTATTATTTGGATCTAGCAATGAAACGCTTAAAGTCCTTCAGTACGCTTTCCTATTAAGTGGTATCATTTG
TATTATTCTTAGCGTTTTGGGACTCATCGATAAACTAGTTCGCTATTTTACACCGACAGTCATTGGAACATATTTATTTC
TTCTTGTCGCACAACTTAGCGGGGCCTTCTTAAAGGGAATGTTTGGTCTTGACGGACAACATACAGAAGTACAAGCTGAC
GTATTTATTCTCTCACTCATTGTTATTTTACTATCCTTTTTCATTATGAAGCTACCTATTATCGGACAATATTCTGTTCT
TTTCAGTATCGTCTGTGGCTGGATTTTATTTGCATGCTTCGGATTATCTAATCCAATAACACCTGTGACAGACATAATCC
GTCTGCCCTCTCTATTTGTTTTCGGCATGCCTCGCATTGAATGGAACATGGCCATTACGGTCGTTTTCGTTACATTATTA
CTTCTAACAAATATGTTAGCAAGTATTCGTGTTGTGCAAAAGGTTGTCTCTAAATATGAAGAAAATGCAACGCCAGATCG
TTTCAAACAAGCCGGCATCATAACAGGGATCAATCAATTACTAGGCGGTCTATTCTCAGCTATTGGGCCTGTCGCCATTT
CTGGATCAGCAGGTTTTATTGCAACGACTAATATTTATAAGCGACTCCCATTTATGTTAGGATCAAGCTTTATTATTGTC
GTTAGTATATTCCCAAAGATCACTTCATTCTTTGCAGCAATCCCAGTTGCAGTTGGTTATGCTGCTATCTATCCTGTATT
TGCAAGTATGATTGGTCTAGCTTTCCGTGAATACGATACAGTACAAAATAAAGAACGATTATTTAAAGTAGCGGGTCTTT
CCATCTTTACAGGAGTCGGGGTTATGTTTGTCCCAGCAGGAGCATTTTCTACGCTCCCACCATTTCTAGCATCATTTTTA
AGTAACGGCCTCGTTCTTGGATCTGTAATGGCAATTCTGCTCGAAATACTATTTTCTCGTTCTACAGAGAAACAACTATC
GTAA

Upstream 100 bases:

>100_bases
TTCATATCGTGTTTCAACTCTTTTCTCTATCTACAATCTTTGCCAGTGGAAATGAAATACGTATATACTAGATACGGAAT
CTATGAAAGAGGTTGATATA

Downstream 100 bases:

>100_bases
ATTGGAAAACTTCCATTATTGCACTCTACCTGTAGAGTTGTTACGATAAATTATCATGGGCAATACGCCCATGATAATTT
ATCCACTTCTTTCCTAAGAA

Product: xanthine/uracil permease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 427; Mature: 427

Protein sequence:

>427_residues
MKTFLSALQWALFILAGSLIVPISVATSYGLDGAEAIAFVQRTLFVLGFAGLLQAIFGHKLPIQEGPAGLWWGIFSLYAS
LGVVLFGSSNETLKVLQYAFLLSGIICIILSVLGLIDKLVRYFTPTVIGTYLFLLVAQLSGAFLKGMFGLDGQHTEVQAD
VFILSLIVILLSFFIMKLPIIGQYSVLFSIVCGWILFACFGLSNPITPVTDIIRLPSLFVFGMPRIEWNMAITVVFVTLL
LLTNMLASIRVVQKVVSKYEENATPDRFKQAGIITGINQLLGGLFSAIGPVAISGSAGFIATTNIYKRLPFMLGSSFIIV
VSIFPKITSFFAAIPVAVGYAAIYPVFASMIGLAFREYDTVQNKERLFKVAGLSIFTGVGVMFVPAGAFSTLPPFLASFL
SNGLVLGSVMAILLEILFSRSTEKQLS

Sequences:

>Translated_427_residues
MKTFLSALQWALFILAGSLIVPISVATSYGLDGAEAIAFVQRTLFVLGFAGLLQAIFGHKLPIQEGPAGLWWGIFSLYAS
LGVVLFGSSNETLKVLQYAFLLSGIICIILSVLGLIDKLVRYFTPTVIGTYLFLLVAQLSGAFLKGMFGLDGQHTEVQAD
VFILSLIVILLSFFIMKLPIIGQYSVLFSIVCGWILFACFGLSNPITPVTDIIRLPSLFVFGMPRIEWNMAITVVFVTLL
LLTNMLASIRVVQKVVSKYEENATPDRFKQAGIITGINQLLGGLFSAIGPVAISGSAGFIATTNIYKRLPFMLGSSFIIV
VSIFPKITSFFAAIPVAVGYAAIYPVFASMIGLAFREYDTVQNKERLFKVAGLSIFTGVGVMFVPAGAFSTLPPFLASFL
SNGLVLGSVMAILLEILFSRSTEKQLS
>Mature_427_residues
MKTFLSALQWALFILAGSLIVPISVATSYGLDGAEAIAFVQRTLFVLGFAGLLQAIFGHKLPIQEGPAGLWWGIFSLYAS
LGVVLFGSSNETLKVLQYAFLLSGIICIILSVLGLIDKLVRYFTPTVIGTYLFLLVAQLSGAFLKGMFGLDGQHTEVQAD
VFILSLIVILLSFFIMKLPIIGQYSVLFSIVCGWILFACFGLSNPITPVTDIIRLPSLFVFGMPRIEWNMAITVVFVTLL
LLTNMLASIRVVQKVVSKYEENATPDRFKQAGIITGINQLLGGLFSAIGPVAISGSAGFIATTNIYKRLPFMLGSSFIIV
VSIFPKITSFFAAIPVAVGYAAIYPVFASMIGLAFREYDTVQNKERLFKVAGLSIFTGVGVMFVPAGAFSTLPPFLASFL
SNGLVLGSVMAILLEILFSRSTEKQLS

Specific function: Unknown

COG id: COG2233

COG function: function code F; Xanthine/uracil permeases

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the xanthine/uracil permease family. Nucleobase:cation symporter-2 (NCS2) (TC 2.A.40) subfamily [H]

Homologues:

Organism=Escherichia coli, GI87081750, Length=437, Percent_Identity=27.4599542334096, Blast_Score=138, Evalue=7e-34,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006042
- InterPro:   IPR006043 [H]

Pfam domain/function: PF00860 Xan_ur_permease [H]

EC number: NA

Molecular weight: Translated: 46179; Mature: 46179

Theoretical pI: Translated: 9.42; Mature: 9.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
2.3 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCHHCCC
>Mature Secondary Structure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CCHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]