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The map label for this gene is yvoD [H]

Identifier: 51894371

GI number: 51894371

Start: 3452672

End: 3453148

Strand: Reverse

Name: yvoD [H]

Synonym: STH3236

Alternate gene names: 51894371

Gene position: 3453148-3452672 (Counterclockwise)

Preceding gene: 51894372

Following gene: 51894370

Centisome position: 96.83

GC content: 72.12

Gene sequence:

>477_bases
ATGTGGCTGTGGTGGCTTTGGGAAGGGCTGCTCACCGGCGTCCGGCAGGTGGCCGGGCTCTGGTGGCTGATCCTGCTGTT
CATCGGCATCCAGATCCTGAAGGACGCCGGCTGGCTCGGCCGCGCCTCCCGGTACATGGCCCCGGTGCTGCGGCCCCTCA
GGCTGCCGGGAGAGGCCGGCGTGCCCATGGCCGCCGGGCTGGGGATCGGCCTCACCTACGGAGCCGGCGTCCTGATCCAG
ACCGCGCGGGAGGGCCGGCTGACCCGGGACGAGCTGACGGTGATGTGCGTCTTCCTGGGCATCTGCCACGCCATCTTTGA
GGAGACGGTGCTGTTTGCCGCCGCGGGGGCCAACGGCCTCCTGCTCCTGGCCATCCGGCTGGCCGCGGCTGCCCTGTTCG
GCTGGTTGGCGGCGCGCGCCTGGCTGCGACCGACAGAGCAGGCCTCGCCGGTGCCGGACGAGGTCCGGACGCGTTAG

Upstream 100 bases:

>100_bases
CCGGGGCCCGGGCCGGATGGGTGCTCCTGGCCCGCACCGTCGCCATGGTGGTCGTCGCGCTCCTGCTGAACTGGCTGCTG
CCGGGGGCGGGAGCGTCATG

Downstream 100 bases:

>100_bases
ACGCATACCGTGCTGTGCCGGGGGCCAGACTTCCGCACAGTGTGATCCGGGCTTCAGCCCCCTGCGCGGGGCCGAAGCCC
TCATCGGCCGCGCCGTGCAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 158; Mature: 158

Protein sequence:

>158_residues
MWLWWLWEGLLTGVRQVAGLWWLILLFIGIQILKDAGWLGRASRYMAPVLRPLRLPGEAGVPMAAGLGIGLTYGAGVLIQ
TAREGRLTRDELTVMCVFLGICHAIFEETVLFAAAGANGLLLLAIRLAAAALFGWLAARAWLRPTEQASPVPDEVRTR

Sequences:

>Translated_158_residues
MWLWWLWEGLLTGVRQVAGLWWLILLFIGIQILKDAGWLGRASRYMAPVLRPLRLPGEAGVPMAAGLGIGLTYGAGVLIQ
TAREGRLTRDELTVMCVFLGICHAIFEETVLFAAAGANGLLLLAIRLAAAALFGWLAARAWLRPTEQASPVPDEVRTR
>Mature_158_residues
MWLWWLWEGLLTGVRQVAGLWWLILLFIGIQILKDAGWLGRASRYMAPVLRPLRLPGEAGVPMAAGLGIGLTYGAGVLIQ
TAREGRLTRDELTVMCVFLGICHAIFEETVLFAAAGANGLLLLAIRLAAAALFGWLAARAWLRPTEQASPVPDEVRTR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011642 [H]

Pfam domain/function: PF07670 Gate [H]

EC number: NA

Molecular weight: Translated: 17291; Mature: 17291

Theoretical pI: Translated: 9.39; Mature: 9.39

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWLWWLWEGLLTGVRQVAGLWWLILLFIGIQILKDAGWLGRASRYMAPVLRPLRLPGEAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
VPMAAGLGIGLTYGAGVLIQTAREGRLTRDELTVMCVFLGICHAIFEETVLFAAAGANGL
CCHHHCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LLLAIRLAAAALFGWLAARAWLRPTEQASPVPDEVRTR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC
>Mature Secondary Structure
MWLWWLWEGLLTGVRQVAGLWWLILLFIGIQILKDAGWLGRASRYMAPVLRPLRLPGEAG
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCC
VPMAAGLGIGLTYGAGVLIQTAREGRLTRDELTVMCVFLGICHAIFEETVLFAAAGANGL
CCHHHCCCCHHHHCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
LLLAIRLAAAALFGWLAARAWLRPTEQASPVPDEVRTR
HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]