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The map label for this gene is spoVB [H]

Identifier: 51894368

GI number: 51894368

Start: 3446212

End: 3447861

Strand: Reverse

Name: spoVB [H]

Synonym: STH3233

Alternate gene names: 51894368

Gene position: 3447861-3446212 (Counterclockwise)

Preceding gene: 51894369

Following gene: 51894367

Centisome position: 96.68

GC content: 72.79

Gene sequence:

>1650_bases
GTGCGCGAAGGCGAGTCGTTTCTGCGGGGTGCGTTCGTTCTCACCCTGGCTACGCTGATCACCCGGCTGCTCGGCCTCCT
GTACAAGCCGGTCGTCGCCCGCATCTTCGCCCCCTTCGACGGGCGCGGCGGGGCGGTGGGCCTGGGACTGACTCAGGTGC
CGGTCACGGCCTACCAGATCGTCCTCTCGTTCACGTCCGTCGGCCTGAACGTGGGCATCGCCCGGTTGGTGGCCGAGCAG
ATGGCCCTGGGCGATGCCCATGGCGCCCGGCGGGTGTTCCGATCCTCCCTGGCGTTGATGACCGGCCTGGGCCTGGTCGG
GGCCCTGGGCTTCTACTTCGGGGCGCCGTGGATCGCCCGGGCGATCTCGCCGGAGGTGCTGGAGGCCGCCCACGGGTTCC
GGGCGATGGCCCCCGCCCTCCTGCTCACCTCCGTGCTGGCCGCTTATCGCGGACTCTTCCAGGGGTTCCAGGAGATGACC
CCCACCGCCGTCTCGCAGATCGTGGAGCAGGTGGTGCGCGTCGGCGCAGGCGCCGCGCTCACCTGGGCGCTGGTCCGGGT
GTCGGTGCCGCTGGGGGCTGCGGGGTTCAACCTGGGGGACGTGTTCGGGGCCGCCGCGGCCCTGATCTACATGCTTATCC
TGGCCGCCCGCCGGGGCGGGGCGCTGTGGCAGGCTGAGCAGGCGGCCGCGCAGGGGCCGGGTGTCCTGGCCGGGCCTGCC
CCTGACCGCGCCGTGAAACGCCGGCTGCCCCGGGGCCTGCGGCTGTACGGCCGCATCTTCGCCGTGGCCGCGCCCATCAC
CGTGGTCGGGGCGGTCGTGCCGCTGATGATGATGGCCGACGCGCTGTTCGTCTTCCGCACGCTCGCCGCCACAGGCGTCA
CCGGCGTGGATGCCCAGGAGCAGTATGGGTTGCTGACCAATGTGTTCATGATCGTCAACCTGCCGGCCATCGTCTCCACC
GCGGTGTACACCGCCGTGCTGCCCGCCCTGGCCGGCTCGGCCGCCCTGGGCCGTACCGCCGAGGCCCGCTTGAAGGCCCG
GCAGGCGTACCGCATCACCTTCCTGCTGGGCATCCCGGCGCAGGCGGGCATCTGGGCCCTGGCACCGGGCATTTACCGGT
TGATCTACGGTTTCCCGGCCGGCGGGCCGGCGCTGGAGGCGATGGCCTGGTCCGTGCTGCCGATCATGCTGCAGCAGACG
ACCTCGGGCGTGCTGCAGGGCATGGGGCGCATCGGCGCGCCGGTGCGCAACTTCGTCCTGGGCGCAGCAGTCAAAATTGG
GCTGACCGCGTGGTGGACAGGCCCTTACGGCATCGCCGGGGCCGCCTGGGCCACCGCCGTCGGCTTCGGCGTGGCCGCCC
TGCTTAACCTGGTGGAGGTGGAGCGGCTCCTGGGGCGGACCATGCTCACCCGCAGCATGCTCTGGAAGCCGCTGGGCGCC
GCACTCGCCATGGTGGGCGTGCTGCGCCTCCTCCAGCCGTACCTGCCGCCGGGCAACGGGGGGGTGCTCCTGGCCATCGC
CGCCGGCGCCGCCGTCTACGGGCTGGCGCTCCTGGCGGCCGGCGGCGTGTACCGCCGGGACGTGGCGGCCATTCCCCGGT
TCGGGCCGCGCCTTGCCGCCATGCTCGACCGCACCCGGCTGCTCCGGTAG

Upstream 100 bases:

>100_bases
CGCCTTTCTCTTGCGCCGCTGCCCTTTACGGCGGCAATTCGGTGAGATACCATAGGTAAGATTGATCAGTCTCACCGGCA
GAACAGGGGGAGGCATGCAG

Downstream 100 bases:

>100_bases
CGCAGCCGAAGGTGGGCGGGCTCGCTGCCCCGCGCCGCGGGGAACAGGGGGGTTATGGGTTGCAACAGTCCAGATCCGAG
GGATTCGTGCGGGGCGCCCT

Product: stage V sporulation protein B

Products: NA

Alternate protein names: Stage III sporulation protein F [H]

Number of amino acids: Translated: 549; Mature: 549

Protein sequence:

>549_residues
MREGESFLRGAFVLTLATLITRLLGLLYKPVVARIFAPFDGRGGAVGLGLTQVPVTAYQIVLSFTSVGLNVGIARLVAEQ
MALGDAHGARRVFRSSLALMTGLGLVGALGFYFGAPWIARAISPEVLEAAHGFRAMAPALLLTSVLAAYRGLFQGFQEMT
PTAVSQIVEQVVRVGAGAALTWALVRVSVPLGAAGFNLGDVFGAAAALIYMLILAARRGGALWQAEQAAAQGPGVLAGPA
PDRAVKRRLPRGLRLYGRIFAVAAPITVVGAVVPLMMMADALFVFRTLAATGVTGVDAQEQYGLLTNVFMIVNLPAIVST
AVYTAVLPALAGSAALGRTAEARLKARQAYRITFLLGIPAQAGIWALAPGIYRLIYGFPAGGPALEAMAWSVLPIMLQQT
TSGVLQGMGRIGAPVRNFVLGAAVKIGLTAWWTGPYGIAGAAWATAVGFGVAALLNLVEVERLLGRTMLTRSMLWKPLGA
ALAMVGVLRLLQPYLPPGNGGVLLAIAAGAAVYGLALLAAGGVYRRDVAAIPRFGPRLAAMLDRTRLLR

Sequences:

>Translated_549_residues
MREGESFLRGAFVLTLATLITRLLGLLYKPVVARIFAPFDGRGGAVGLGLTQVPVTAYQIVLSFTSVGLNVGIARLVAEQ
MALGDAHGARRVFRSSLALMTGLGLVGALGFYFGAPWIARAISPEVLEAAHGFRAMAPALLLTSVLAAYRGLFQGFQEMT
PTAVSQIVEQVVRVGAGAALTWALVRVSVPLGAAGFNLGDVFGAAAALIYMLILAARRGGALWQAEQAAAQGPGVLAGPA
PDRAVKRRLPRGLRLYGRIFAVAAPITVVGAVVPLMMMADALFVFRTLAATGVTGVDAQEQYGLLTNVFMIVNLPAIVST
AVYTAVLPALAGSAALGRTAEARLKARQAYRITFLLGIPAQAGIWALAPGIYRLIYGFPAGGPALEAMAWSVLPIMLQQT
TSGVLQGMGRIGAPVRNFVLGAAVKIGLTAWWTGPYGIAGAAWATAVGFGVAALLNLVEVERLLGRTMLTRSMLWKPLGA
ALAMVGVLRLLQPYLPPGNGGVLLAIAAGAAVYGLALLAAGGVYRRDVAAIPRFGPRLAAMLDRTRLLR
>Mature_549_residues
MREGESFLRGAFVLTLATLITRLLGLLYKPVVARIFAPFDGRGGAVGLGLTQVPVTAYQIVLSFTSVGLNVGIARLVAEQ
MALGDAHGARRVFRSSLALMTGLGLVGALGFYFGAPWIARAISPEVLEAAHGFRAMAPALLLTSVLAAYRGLFQGFQEMT
PTAVSQIVEQVVRVGAGAALTWALVRVSVPLGAAGFNLGDVFGAAAALIYMLILAARRGGALWQAEQAAAQGPGVLAGPA
PDRAVKRRLPRGLRLYGRIFAVAAPITVVGAVVPLMMMADALFVFRTLAATGVTGVDAQEQYGLLTNVFMIVNLPAIVST
AVYTAVLPALAGSAALGRTAEARLKARQAYRITFLLGIPAQAGIWALAPGIYRLIYGFPAGGPALEAMAWSVLPIMLQQT
TSGVLQGMGRIGAPVRNFVLGAAVKIGLTAWWTGPYGIAGAAWATAVGFGVAALLNLVEVERLLGRTMLTRSMLWKPLGA
ALAMVGVLRLLQPYLPPGNGGVLLAIAAGAAVYGLALLAAGGVYRRDVAAIPRFGPRLAAMLDRTRLLR

Specific function: Involved, directly or indirectly, in spore cortex biosynthesis. Affects only indirectly the expression of late sporulation genes [H]

COG id: COG2244

COG function: function code R; Membrane protein involved in the export of O-antigen and teichoic acid

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the polysaccharide synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002528
- InterPro:   IPR002797
- InterPro:   IPR014249 [H]

Pfam domain/function: PF01943 Polysacc_synt [H]

EC number: NA

Molecular weight: Translated: 57198; Mature: 57198

Theoretical pI: Translated: 11.65; Mature: 11.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHCC
>Mature Secondary Structure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HHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1744050; 9384377 [H]