Click here to switch to the map view.

The map label for this gene is gatC

Identifier: 51893960

GI number: 51893960

Start: 3037414

End: 3037704

Strand: Reverse

Name: gatC

Synonym: STH2822

Alternate gene names: 51893960

Gene position: 3037704-3037414 (Counterclockwise)

Preceding gene: 51893961

Following gene: 51893959

Centisome position: 85.18

GC content: 66.32

Gene sequence:

>291_bases
GTGGCGGTAACGCGGGACGAGATTCAGCGCGTGGCCCGGCTGGCCCGCCTGAGCCTCTCCGAGGAAGAGATCGAGACCTT
CGCGGAGCAACTCAACCGCATTCTCGAACACGTGGAACGCATCAATCGGCTGGACGTGGCGGATGTGCCTCCCACCTACC
ACGGCGTCGCCTTGCAGCACCCCTTCCGGGAGGACAAGCCTCTGCCGTCGCTGGACCGGGAGGCGGTTCTGGCGCTGGCC
CCGGAGGCGGAGGCCGGCTGTTACAAGGTGCCGAAGATTACGGAGGGCTAA

Upstream 100 bases:

>100_bases
CGACATTGCTTGTCTGGGATGCGGTGTGTTAGAATCAGGTAGTTACGCGCACGCTCCGGCTGAACAAGTTGTCCGAAATT
CGGGATGGTGGTGATCGACA

Downstream 100 bases:

>100_bases
GGGATGTCTGGGATGACGCACATGCTGAGCGCGGCCCGGCTCAACCGGCTCTTTCTGGCCGGGGAGCTGTCGGCGGTGGA
AATTGCGGAATCTGCCCTGA

Product: glutamyl-tRNA(Gln) amidotransferase subunit C

Products: NA

Alternate protein names: Asp/Glu-ADT subunit C

Number of amino acids: Translated: 96; Mature: 95

Protein sequence:

>96_residues
MAVTRDEIQRVARLARLSLSEEEIETFAEQLNRILEHVERINRLDVADVPPTYHGVALQHPFREDKPLPSLDREAVLALA
PEAEAGCYKVPKITEG

Sequences:

>Translated_96_residues
MAVTRDEIQRVARLARLSLSEEEIETFAEQLNRILEHVERINRLDVADVPPTYHGVALQHPFREDKPLPSLDREAVLALA
PEAEAGCYKVPKITEG
>Mature_95_residues
AVTRDEIQRVARLARLSLSEEEIETFAEQLNRILEHVERINRLDVADVPPTYHGVALQHPFREDKPLPSLDREAVLALAP
EAEAGCYKVPKITEG

Specific function: Allows the formation of correctly charged Asn-tRNA(Asn) or Gln-tRNA(Gln) through the transamidation of misacylated Asp- tRNA(Asn) or Glu-tRNA(Gln) in organisms which lack either or both of asparaginyl-tRNA or glutaminyl-tRNA synthetases. The reaction take

COG id: COG0721

COG function: function code J; Asp-tRNAAsn/Glu-tRNAGln amidotransferase C subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gatC family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): GATC_SYMTH (Q67KJ1)

Other databases:

- EMBL:   AP006840
- RefSeq:   YP_076651.1
- ProteinModelPortal:   Q67KJ1
- SMR:   Q67KJ1
- GeneID:   2980427
- GenomeReviews:   AP006840_GR
- KEGG:   sth:STH2822
- NMPDR:   fig|292459.1.peg.2697
- HOGENOM:   HBG586403
- OMA:   PTSHAVP
- BioCyc:   STHE292459:STH2822-MONOMER
- GO:   GO:0006412
- HAMAP:   MF_00122
- InterPro:   IPR003837
- TIGRFAMs:   TIGR00135

Pfam domain/function: PF02686 Glu-tRNAGln

EC number: 6.3.5.-

Molecular weight: Translated: 10843; Mature: 10712

Theoretical pI: Translated: 4.75; Mature: 4.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.0 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVTRDEIQRVARLARLSLSEEEIETFAEQLNRILEHVERINRLDVADVPPTYHGVALQH
CCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCC
PFREDKPLPSLDREAVLALAPEAEAGCYKVPKITEG
CCCCCCCCCCCCCHHHHHCCCCCCCCCEECCCCCCC
>Mature Secondary Structure 
AVTRDEIQRVARLARLSLSEEEIETFAEQLNRILEHVERINRLDVADVPPTYHGVALQH
CCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEECCC
PFREDKPLPSLDREAVLALAPEAEAGCYKVPKITEG
CCCCCCCCCCCCCHHHHHCCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA