Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is 51893947

Identifier: 51893947

GI number: 51893947

Start: 3020746

End: 3021591

Strand: Reverse

Name: 51893947

Synonym: STH2809

Alternate gene names: NA

Gene position: 3021591-3020746 (Counterclockwise)

Preceding gene: 51893949

Following gene: 51893946

Centisome position: 84.73

GC content: 71.28

Gene sequence:

>846_bases
TTGGCGAATGTCCTGGAGCGCGGGATCGCGGTGTGGCGGCGCCACTGGCCGGGGCTGTTCCTCGCGTGCCTGGCGGTCGC
GGTGGTGCCGGGGCTCACGGTCGCGCTGGTGGGGGCGCTGCTCGGGCTGCTTCCGGTCAGTCTGGCGGACGCGCTGGTCC
TGCTGCTGCCCGTGCAGTTCGCCGGTCAGGGGGCGGACGTGACCCTATTCTTCGGGCAGAAAGGTTCGTGGGTTCTCCTG
GTGCTGTACGGCGTGCTCGTCCTTCTGGGATCCGCCGGAATCCTGGGCATCCTGTGGACCGTGGTGCATGAGGGCCGCGC
GCCGAAGGCGTCGGATTTCCTCGGGGGCATCCGGCGGTACGCGGGCCGGCTGGTCGGGGTGCGGGTGCTGTGCGGCCTGG
TGCTGGTGGCGGCCGCCCTGGCGGCTGGTCTGGTGTACGTGCTGGCCGGGTCCGTGCTGGCGGGCTGGCTGGTGCCCATC
GCCGGCCTGGCGGCCCTCTTGGCGGGCATCAGCGCGGTGCTCTACGCGGATTTCGCGCTGGTGGTCGAGGAAGGCACCGC
CACCGAGGCGATGGGAGACAGCGTCGGCGTGCTCACCGAACGCTGGCGGGAGGCTGTGGGGGCCGCGCTCATGTTCATCC
TGATCTCGGTCGCCGGCGAGGCGGCAGGCTGGCTGGTGGCCAGGATCATCCCCGGGCTGCCGGGGCTCCTGCTGAGCCTG
CTTCCGGTGGCGCTGGCCGAGAGCATCCTCCTTGCGTACCTGGCGGTGCGGTACGTCGAACACGTCCATCGCGGCATCTA
CGGCCGGGACGGCCGGTTTGCCATCGATGAGCGAAAGGCCGGGTGA

Upstream 100 bases:

>100_bases
TAGGGGAGGACTATTCGCCATTCAGCGAACATTCCTTCTTAATATCGAGTCGTGCGACGGCGCACGGAAGGCAGGCGTAT
GACCGAAAGGGTGATGTTCG

Downstream 100 bases:

>100_bases
GCGGCCGGCGGGCGGGAGATCGTCCGTCGGGTGTGACCCCACGTGCAGCGGAGGAGGGGACGCGGGATGACGGGTGCCGC
GGTGCGCAGACCCCGGCCCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 281; Mature: 280

Protein sequence:

>281_residues
MANVLERGIAVWRRHWPGLFLACLAVAVVPGLTVALVGALLGLLPVSLADALVLLLPVQFAGQGADVTLFFGQKGSWVLL
VLYGVLVLLGSAGILGILWTVVHEGRAPKASDFLGGIRRYAGRLVGVRVLCGLVLVAAALAAGLVYVLAGSVLAGWLVPI
AGLAALLAGISAVLYADFALVVEEGTATEAMGDSVGVLTERWREAVGAALMFILISVAGEAAGWLVARIIPGLPGLLLSL
LPVALAESILLAYLAVRYVEHVHRGIYGRDGRFAIDERKAG

Sequences:

>Translated_281_residues
MANVLERGIAVWRRHWPGLFLACLAVAVVPGLTVALVGALLGLLPVSLADALVLLLPVQFAGQGADVTLFFGQKGSWVLL
VLYGVLVLLGSAGILGILWTVVHEGRAPKASDFLGGIRRYAGRLVGVRVLCGLVLVAAALAAGLVYVLAGSVLAGWLVPI
AGLAALLAGISAVLYADFALVVEEGTATEAMGDSVGVLTERWREAVGAALMFILISVAGEAAGWLVARIIPGLPGLLLSL
LPVALAESILLAYLAVRYVEHVHRGIYGRDGRFAIDERKAG
>Mature_280_residues
ANVLERGIAVWRRHWPGLFLACLAVAVVPGLTVALVGALLGLLPVSLADALVLLLPVQFAGQGADVTLFFGQKGSWVLLV
LYGVLVLLGSAGILGILWTVVHEGRAPKASDFLGGIRRYAGRLVGVRVLCGLVLVAAALAAGLVYVLAGSVLAGWLVPIA
GLAALLAGISAVLYADFALVVEEGTATEAMGDSVGVLTERWREAVGAALMFILISVAGEAAGWLVARIIPGLPGLLLSLL
PVALAESILLAYLAVRYVEHVHRGIYGRDGRFAIDERKAG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29166; Mature: 29035

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANVLERGIAVWRRHWPGLFLACLAVAVVPGLTVALVGALLGLLPVSLADALVLLLPVQF
CCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGQGADVTLFFGQKGSWVLLVLYGVLVLLGSAGILGILWTVVHEGRAPKASDFLGGIRRY
CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AGRLVGVRVLCGLVLVAAALAAGLVYVLAGSVLAGWLVPIAGLAALLAGISAVLYADFAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVEEGTATEAMGDSVGVLTERWREAVGAALMFILISVAGEAAGWLVARIIPGLPGLLLSL
HHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LPVALAESILLAYLAVRYVEHVHRGIYGRDGRFAIDERKAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCC
>Mature Secondary Structure 
ANVLERGIAVWRRHWPGLFLACLAVAVVPGLTVALVGALLGLLPVSLADALVLLLPVQF
CHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGQGADVTLFFGQKGSWVLLVLYGVLVLLGSAGILGILWTVVHEGRAPKASDFLGGIRRY
CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH
AGRLVGVRVLCGLVLVAAALAAGLVYVLAGSVLAGWLVPIAGLAALLAGISAVLYADFAL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VVEEGTATEAMGDSVGVLTERWREAVGAALMFILISVAGEAAGWLVARIIPGLPGLLLSL
HHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH
LPVALAESILLAYLAVRYVEHVHRGIYGRDGRFAIDERKAG
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA