| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893947
Identifier: 51893947
GI number: 51893947
Start: 3020746
End: 3021591
Strand: Reverse
Name: 51893947
Synonym: STH2809
Alternate gene names: NA
Gene position: 3021591-3020746 (Counterclockwise)
Preceding gene: 51893949
Following gene: 51893946
Centisome position: 84.73
GC content: 71.28
Gene sequence:
>846_bases TTGGCGAATGTCCTGGAGCGCGGGATCGCGGTGTGGCGGCGCCACTGGCCGGGGCTGTTCCTCGCGTGCCTGGCGGTCGC GGTGGTGCCGGGGCTCACGGTCGCGCTGGTGGGGGCGCTGCTCGGGCTGCTTCCGGTCAGTCTGGCGGACGCGCTGGTCC TGCTGCTGCCCGTGCAGTTCGCCGGTCAGGGGGCGGACGTGACCCTATTCTTCGGGCAGAAAGGTTCGTGGGTTCTCCTG GTGCTGTACGGCGTGCTCGTCCTTCTGGGATCCGCCGGAATCCTGGGCATCCTGTGGACCGTGGTGCATGAGGGCCGCGC GCCGAAGGCGTCGGATTTCCTCGGGGGCATCCGGCGGTACGCGGGCCGGCTGGTCGGGGTGCGGGTGCTGTGCGGCCTGG TGCTGGTGGCGGCCGCCCTGGCGGCTGGTCTGGTGTACGTGCTGGCCGGGTCCGTGCTGGCGGGCTGGCTGGTGCCCATC GCCGGCCTGGCGGCCCTCTTGGCGGGCATCAGCGCGGTGCTCTACGCGGATTTCGCGCTGGTGGTCGAGGAAGGCACCGC CACCGAGGCGATGGGAGACAGCGTCGGCGTGCTCACCGAACGCTGGCGGGAGGCTGTGGGGGCCGCGCTCATGTTCATCC TGATCTCGGTCGCCGGCGAGGCGGCAGGCTGGCTGGTGGCCAGGATCATCCCCGGGCTGCCGGGGCTCCTGCTGAGCCTG CTTCCGGTGGCGCTGGCCGAGAGCATCCTCCTTGCGTACCTGGCGGTGCGGTACGTCGAACACGTCCATCGCGGCATCTA CGGCCGGGACGGCCGGTTTGCCATCGATGAGCGAAAGGCCGGGTGA
Upstream 100 bases:
>100_bases TAGGGGAGGACTATTCGCCATTCAGCGAACATTCCTTCTTAATATCGAGTCGTGCGACGGCGCACGGAAGGCAGGCGTAT GACCGAAAGGGTGATGTTCG
Downstream 100 bases:
>100_bases GCGGCCGGCGGGCGGGAGATCGTCCGTCGGGTGTGACCCCACGTGCAGCGGAGGAGGGGACGCGGGATGACGGGTGCCGC GGTGCGCAGACCCCGGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 280
Protein sequence:
>281_residues MANVLERGIAVWRRHWPGLFLACLAVAVVPGLTVALVGALLGLLPVSLADALVLLLPVQFAGQGADVTLFFGQKGSWVLL VLYGVLVLLGSAGILGILWTVVHEGRAPKASDFLGGIRRYAGRLVGVRVLCGLVLVAAALAAGLVYVLAGSVLAGWLVPI AGLAALLAGISAVLYADFALVVEEGTATEAMGDSVGVLTERWREAVGAALMFILISVAGEAAGWLVARIIPGLPGLLLSL LPVALAESILLAYLAVRYVEHVHRGIYGRDGRFAIDERKAG
Sequences:
>Translated_281_residues MANVLERGIAVWRRHWPGLFLACLAVAVVPGLTVALVGALLGLLPVSLADALVLLLPVQFAGQGADVTLFFGQKGSWVLL VLYGVLVLLGSAGILGILWTVVHEGRAPKASDFLGGIRRYAGRLVGVRVLCGLVLVAAALAAGLVYVLAGSVLAGWLVPI AGLAALLAGISAVLYADFALVVEEGTATEAMGDSVGVLTERWREAVGAALMFILISVAGEAAGWLVARIIPGLPGLLLSL LPVALAESILLAYLAVRYVEHVHRGIYGRDGRFAIDERKAG >Mature_280_residues ANVLERGIAVWRRHWPGLFLACLAVAVVPGLTVALVGALLGLLPVSLADALVLLLPVQFAGQGADVTLFFGQKGSWVLLV LYGVLVLLGSAGILGILWTVVHEGRAPKASDFLGGIRRYAGRLVGVRVLCGLVLVAAALAAGLVYVLAGSVLAGWLVPIA GLAALLAGISAVLYADFALVVEEGTATEAMGDSVGVLTERWREAVGAALMFILISVAGEAAGWLVARIIPGLPGLLLSLL PVALAESILLAYLAVRYVEHVHRGIYGRDGRFAIDERKAG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29166; Mature: 29035
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MANVLERGIAVWRRHWPGLFLACLAVAVVPGLTVALVGALLGLLPVSLADALVLLLPVQF CCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGQGADVTLFFGQKGSWVLLVLYGVLVLLGSAGILGILWTVVHEGRAPKASDFLGGIRRY CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH AGRLVGVRVLCGLVLVAAALAAGLVYVLAGSVLAGWLVPIAGLAALLAGISAVLYADFAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVEEGTATEAMGDSVGVLTERWREAVGAALMFILISVAGEAAGWLVARIIPGLPGLLLSL HHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LPVALAESILLAYLAVRYVEHVHRGIYGRDGRFAIDERKAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCC >Mature Secondary Structure ANVLERGIAVWRRHWPGLFLACLAVAVVPGLTVALVGALLGLLPVSLADALVLLLPVQF CHHHHHHHHHHHHHCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AGQGADVTLFFGQKGSWVLLVLYGVLVLLGSAGILGILWTVVHEGRAPKASDFLGGIRRY CCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHH AGRLVGVRVLCGLVLVAAALAAGLVYVLAGSVLAGWLVPIAGLAALLAGISAVLYADFAL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VVEEGTATEAMGDSVGVLTERWREAVGAALMFILISVAGEAAGWLVARIIPGLPGLLLSL HHCCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHH LPVALAESILLAYLAVRYVEHVHRGIYGRDGRFAIDERKAG HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA