| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893927
Identifier: 51893927
GI number: 51893927
Start: 3005048
End: 3005431
Strand: Reverse
Name: 51893927
Synonym: STH2789
Alternate gene names: NA
Gene position: 3005431-3005048 (Counterclockwise)
Preceding gene: 51893929
Following gene: 51893925
Centisome position: 84.28
GC content: 75.0
Gene sequence:
>384_bases ATGGCGTCCGTCTACGCGCTGGCCGCGGACCTGTTCTTCGCCGAACGGCTGGAGCGGGCCCTGCGTGACCTCGGACACAA GCCGGAGGTGCGGGACCTCAGCGCCGGCGGGTCCGGGCAGGCCCCCGGGAACGCGGCGATCACACAGGTCAGCCTGCCCG GGGGCGTCGACCTGGCCATCGTCGACCTGGAGGCCGGCGAGGCGGCCCTGGCGCTGGTCCGGGCCGCCCGGGAGCGGGGC ATTCCGGTCCTGGCCTTCGGCGCACACGTGGACGTGGAGGCCCGCCGGGCCGCCGAGGGCCTGGGCGCCAGGGTGGTCAC CAAGTCCCGGCTCACCCGGTCCTTCACAGACCTGGTGGCGGCCATGCTCGGCCCGTCTGTGTGA
Upstream 100 bases:
>100_bases TGCGCACATCCTCCCGGATAGTGGCTTCCGCCGGCGGCGCGCCGCTGAGCGGGCCGCCGGCGACCAAAAGGTGTACAACT GATCGAGGGGGAATCCGTAG
Downstream 100 bases:
>100_bases CCCCGCCTGCCTGGGCCGCGGTCAGACGCCCCAGCGTGCCGCCACGGCGTCGGCGGCCCGGCGCACGAACTCGTCGGGAT CCTGCCGCAGCCGGGCCACG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 127; Mature: 126
Protein sequence:
>127_residues MASVYALAADLFFAERLERALRDLGHKPEVRDLSAGGSGQAPGNAAITQVSLPGGVDLAIVDLEAGEAALALVRAARERG IPVLAFGAHVDVEARRAAEGLGARVVTKSRLTRSFTDLVAAMLGPSV
Sequences:
>Translated_127_residues MASVYALAADLFFAERLERALRDLGHKPEVRDLSAGGSGQAPGNAAITQVSLPGGVDLAIVDLEAGEAALALVRAARERG IPVLAFGAHVDVEARRAAEGLGARVVTKSRLTRSFTDLVAAMLGPSV >Mature_126_residues ASVYALAADLFFAERLERALRDLGHKPEVRDLSAGGSGQAPGNAAITQVSLPGGVDLAIVDLEAGEAALALVRAARERGI PVLAFGAHVDVEARRAAEGLGARVVTKSRLTRSFTDLVAAMLGPSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 13103; Mature: 12972
Theoretical pI: Translated: 6.53; Mature: 6.53
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.8 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASVYALAADLFFAERLERALRDLGHKPEVRDLSAGGSGQAPGNAAITQVSLPGGVDLAI CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE VDLEAGEAALALVRAARERGIPVLAFGAHVDVEARRAAEGLGARVVTKSRLTRSFTDLVA EEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AMLGPSV HHHCCCC >Mature Secondary Structure ASVYALAADLFFAERLERALRDLGHKPEVRDLSAGGSGQAPGNAAITQVSLPGGVDLAI CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE VDLEAGEAALALVRAARERGIPVLAFGAHVDVEARRAAEGLGARVVTKSRLTRSFTDLVA EEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH AMLGPSV HHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA