Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

Click here to switch to the map view.

The map label for this gene is 51893927

Identifier: 51893927

GI number: 51893927

Start: 3005048

End: 3005431

Strand: Reverse

Name: 51893927

Synonym: STH2789

Alternate gene names: NA

Gene position: 3005431-3005048 (Counterclockwise)

Preceding gene: 51893929

Following gene: 51893925

Centisome position: 84.28

GC content: 75.0

Gene sequence:

>384_bases
ATGGCGTCCGTCTACGCGCTGGCCGCGGACCTGTTCTTCGCCGAACGGCTGGAGCGGGCCCTGCGTGACCTCGGACACAA
GCCGGAGGTGCGGGACCTCAGCGCCGGCGGGTCCGGGCAGGCCCCCGGGAACGCGGCGATCACACAGGTCAGCCTGCCCG
GGGGCGTCGACCTGGCCATCGTCGACCTGGAGGCCGGCGAGGCGGCCCTGGCGCTGGTCCGGGCCGCCCGGGAGCGGGGC
ATTCCGGTCCTGGCCTTCGGCGCACACGTGGACGTGGAGGCCCGCCGGGCCGCCGAGGGCCTGGGCGCCAGGGTGGTCAC
CAAGTCCCGGCTCACCCGGTCCTTCACAGACCTGGTGGCGGCCATGCTCGGCCCGTCTGTGTGA

Upstream 100 bases:

>100_bases
TGCGCACATCCTCCCGGATAGTGGCTTCCGCCGGCGGCGCGCCGCTGAGCGGGCCGCCGGCGACCAAAAGGTGTACAACT
GATCGAGGGGGAATCCGTAG

Downstream 100 bases:

>100_bases
CCCCGCCTGCCTGGGCCGCGGTCAGACGCCCCAGCGTGCCGCCACGGCGTCGGCGGCCCGGCGCACGAACTCGTCGGGAT
CCTGCCGCAGCCGGGCCACG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 127; Mature: 126

Protein sequence:

>127_residues
MASVYALAADLFFAERLERALRDLGHKPEVRDLSAGGSGQAPGNAAITQVSLPGGVDLAIVDLEAGEAALALVRAARERG
IPVLAFGAHVDVEARRAAEGLGARVVTKSRLTRSFTDLVAAMLGPSV

Sequences:

>Translated_127_residues
MASVYALAADLFFAERLERALRDLGHKPEVRDLSAGGSGQAPGNAAITQVSLPGGVDLAIVDLEAGEAALALVRAARERG
IPVLAFGAHVDVEARRAAEGLGARVVTKSRLTRSFTDLVAAMLGPSV
>Mature_126_residues
ASVYALAADLFFAERLERALRDLGHKPEVRDLSAGGSGQAPGNAAITQVSLPGGVDLAIVDLEAGEAALALVRAARERGI
PVLAFGAHVDVEARRAAEGLGARVVTKSRLTRSFTDLVAAMLGPSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13103; Mature: 12972

Theoretical pI: Translated: 6.53; Mature: 6.53

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MASVYALAADLFFAERLERALRDLGHKPEVRDLSAGGSGQAPGNAAITQVSLPGGVDLAI
CCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE
VDLEAGEAALALVRAARERGIPVLAFGAHVDVEARRAAEGLGARVVTKSRLTRSFTDLVA
EEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AMLGPSV
HHHCCCC
>Mature Secondary Structure 
ASVYALAADLFFAERLERALRDLGHKPEVRDLSAGGSGQAPGNAAITQVSLPGGVDLAI
CHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCCEEEE
VDLEAGEAALALVRAARERGIPVLAFGAHVDVEARRAAEGLGARVVTKSRLTRSFTDLVA
EEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
AMLGPSV
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA