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The map label for this gene is 51893844

Identifier: 51893844

GI number: 51893844

Start: 2900678

End: 2902036

Strand: Reverse

Name: 51893844

Synonym: STH2706

Alternate gene names: NA

Gene position: 2902036-2900678 (Counterclockwise)

Preceding gene: 51893845

Following gene: 51893842

Centisome position: 81.38

GC content: 59.97

Gene sequence:

>1359_bases
ATGAGCAAGAAGACGTATCGACCGTATGAGCCCAATCAGCTGTTGCTGCTGCCCCCTGCCCTGCAGGACTGGCTTCCGCA
TGACCATTTCGCTTATTTCCTGAGTGATGTCGTGGACTCACTCGATCTAAGCCAAATCGAACGGACATACGAGCGAGAGC
TGCGAGGTTACCCACCGTACCATCCGCGGATGATGGTCAAGGTGCTGCTGTACGCCTACTGCAACGGCGTCTACTCCTCT
CGCAAGATCGAACGCCGGCTGCAGGAGGACGTAGCCTTCCGCGTCCTTGCGGCCAACAACCAGCCCGACTTCCGGACGAT
CAGCGATTTCCGGAAGCGGCATCTAAAGGCCCTCTCCGACCTGTTCCTGCAAGTGGTCAAGATCTGCAAGAAGGCCGGGC
TGGTTCGCCTGGGTCATGTGGCCCTGGACGGCACCAAGATCAAGGCCAACGCCTCCAAGCACAAGGCGATGAGCTACAGC
CGGATGGTGGAGGAAGAACAACGCCTGAAGGCGGAGATCGCAGAGCTGCTCCAGAAAGCCGAGCAAGCTGACCAGGCCGA
GGATCACCGCTTCGGCCCACATCGTCGTGGGGATGAACTGCCCGAAGAACTCCGCTTCCGTGAGCGGCGGCTGGCCAAGA
TTCAAGAAGCCAAGGCTGCTCTGGAAGCCGAAGCGCGCCTGAGGGCCGGCGCTGACGAACATGAGCCTCCCGAGGAGCCG
GGACCCAAGGGGCCCAAGGGCGGTCGTCGGCGGAAGCGGCCGAAGGCAGAACCCGCACCAACAGCGCAGCGCAACTTTAC
GGATCCCGATTCCCGGATCATGAAAGGCTCTGATAAGCAGTTCATCCAGGGGTACAACGCCCAGGCCGTCGTCGATGCCG
ATACGCAGATTGTCGTCGCTGCTGCCGTAACAAACCAGGCGGCAGATGCTCCGCACTTGATCCCCATGATGGAGCAGGTC
GAAACCAATGTCGATGAGATGCCGGAGGAGGTTTCTGCCGATGCAGGGTACTTCAGTGAGCAAAACGTTCAGTGGCTCTT
GCAGCGGCGAATCAATCCCTACATTCCTCCGGAGAAGCAGCGGCACAGCGAACGTCGCCGTGCGAAATCACCACGCGGCC
CGATTCCCAAGGGAGCAACGCTTCGGGATCGGATGCGGCGGAAACTGCAGCTAAAGCGACACGCCGAGCGCTACCGAAAG
CGAGAGCAGAGCATTGAGCCGGTCTTCGGGCAGATCAAGGAGGCTCGTGGTTTCCGGCAGTTCCATCTCCGTGGACTGGA
AGCAGTCAACGGGGAATGGCTTCTTGTGTGCCTTTGCCACAATCTCTTGAAGCTCTACGCGTTCAGGCAGGCCGGATAG

Upstream 100 bases:

>100_bases
CTGCTGGCCGTTCCGCCAGCGCTTGACGTTGCGGCTAGGAGCCTGTCTGAGTAAGCCAGTTCTGTAGGAGCGAAAGGGTT
GGGTGTCCAATGTCTTCATC

Downstream 100 bases:

>100_bases
ACCCGAAATCTGCCTTCAGACAGCGCATGAAGAAGTAGGCACGATCGTTGATATCCAATCATTGGGAGTCTGCCCCTATC
TCACGTGCGGTTACCCGGAC

Product: transposase

Products: NA

Alternate protein names: Transposase IS4 Family Protein; IS4 Family Transposase; ISPsy6 Transposase; Transposase IS4 Family; Transposase Is4 Family Protein; ISKpn6-Like Transposase; Transposase Is4 Family; Transposase ISNCY Family Protein; Transglycosylase Domain-Containing Protein; ISCps6 Transposase; ISNCY Family Transposase; ISPpu20 Transposase

Number of amino acids: Translated: 452; Mature: 451

Protein sequence:

>452_residues
MSKKTYRPYEPNQLLLLPPALQDWLPHDHFAYFLSDVVDSLDLSQIERTYERELRGYPPYHPRMMVKVLLYAYCNGVYSS
RKIERRLQEDVAFRVLAANNQPDFRTISDFRKRHLKALSDLFLQVVKICKKAGLVRLGHVALDGTKIKANASKHKAMSYS
RMVEEEQRLKAEIAELLQKAEQADQAEDHRFGPHRRGDELPEELRFRERRLAKIQEAKAALEAEARLRAGADEHEPPEEP
GPKGPKGGRRRKRPKAEPAPTAQRNFTDPDSRIMKGSDKQFIQGYNAQAVVDADTQIVVAAAVTNQAADAPHLIPMMEQV
ETNVDEMPEEVSADAGYFSEQNVQWLLQRRINPYIPPEKQRHSERRRAKSPRGPIPKGATLRDRMRRKLQLKRHAERYRK
REQSIEPVFGQIKEARGFRQFHLRGLEAVNGEWLLVCLCHNLLKLYAFRQAG

Sequences:

>Translated_452_residues
MSKKTYRPYEPNQLLLLPPALQDWLPHDHFAYFLSDVVDSLDLSQIERTYERELRGYPPYHPRMMVKVLLYAYCNGVYSS
RKIERRLQEDVAFRVLAANNQPDFRTISDFRKRHLKALSDLFLQVVKICKKAGLVRLGHVALDGTKIKANASKHKAMSYS
RMVEEEQRLKAEIAELLQKAEQADQAEDHRFGPHRRGDELPEELRFRERRLAKIQEAKAALEAEARLRAGADEHEPPEEP
GPKGPKGGRRRKRPKAEPAPTAQRNFTDPDSRIMKGSDKQFIQGYNAQAVVDADTQIVVAAAVTNQAADAPHLIPMMEQV
ETNVDEMPEEVSADAGYFSEQNVQWLLQRRINPYIPPEKQRHSERRRAKSPRGPIPKGATLRDRMRRKLQLKRHAERYRK
REQSIEPVFGQIKEARGFRQFHLRGLEAVNGEWLLVCLCHNLLKLYAFRQAG
>Mature_451_residues
SKKTYRPYEPNQLLLLPPALQDWLPHDHFAYFLSDVVDSLDLSQIERTYERELRGYPPYHPRMMVKVLLYAYCNGVYSSR
KIERRLQEDVAFRVLAANNQPDFRTISDFRKRHLKALSDLFLQVVKICKKAGLVRLGHVALDGTKIKANASKHKAMSYSR
MVEEEQRLKAEIAELLQKAEQADQAEDHRFGPHRRGDELPEELRFRERRLAKIQEAKAALEAEARLRAGADEHEPPEEPG
PKGPKGGRRRKRPKAEPAPTAQRNFTDPDSRIMKGSDKQFIQGYNAQAVVDADTQIVVAAAVTNQAADAPHLIPMMEQVE
TNVDEMPEEVSADAGYFSEQNVQWLLQRRINPYIPPEKQRHSERRRAKSPRGPIPKGATLRDRMRRKLQLKRHAERYRKR
EQSIEPVFGQIKEARGFRQFHLRGLEAVNGEWLLVCLCHNLLKLYAFRQAG

Specific function: Unknown

COG id: COG3666

COG function: function code L; Transposase and inactivated derivatives

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 52201; Mature: 52070

Theoretical pI: Translated: 10.11; Mature: 10.11

Prosite motif: PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKKTYRPYEPNQLLLLPPALQDWLPHDHFAYFLSDVVDSLDLSQIERTYERELRGYPPY
CCCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
HPRMMVKVLLYAYCNGVYSSRKIERRLQEDVAFRVLAANNQPDFRTISDFRKRHLKALSD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHH
LFLQVVKICKKAGLVRLGHVALDGTKIKANASKHKAMSYSRMVEEEQRLKAEIAELLQKA
HHHHHHHHHHHCCCEEECCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQADQAEDHRFGPHRRGDELPEELRFRERRLAKIQEAKAALEAEARLRAGADEHEPPEEP
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GPKGPKGGRRRKRPKAEPAPTAQRNFTDPDSRIMKGSDKQFIQGYNAQAVVDADTQIVVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCCCEEEECCCCEEEE
AAVTNQAADAPHLIPMMEQVETNVDEMPEEVSADAGYFSEQNVQWLLQRRINPYIPPEKQ
EHHHCCCCCCCHHHHHHHHHHCCHHHCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHH
RHSERRRAKSPRGPIPKGATLRDRMRRKLQLKRHAERYRKREQSIEPVFGQIKEARGFRQ
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FHLRGLEAVNGEWLLVCLCHNLLKLYAFRQAG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SKKTYRPYEPNQLLLLPPALQDWLPHDHFAYFLSDVVDSLDLSQIERTYERELRGYPPY
CCCCCCCCCCCEEEEECHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCC
HPRMMVKVLLYAYCNGVYSSRKIERRLQEDVAFRVLAANNQPDFRTISDFRKRHLKALSD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHHHHHHHHHHHHHHHHH
LFLQVVKICKKAGLVRLGHVALDGTKIKANASKHKAMSYSRMVEEEQRLKAEIAELLQKA
HHHHHHHHHHHCCCEEECCEEECCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
EQADQAEDHRFGPHRRGDELPEELRFRERRLAKIQEAKAALEAEARLRAGADEHEPPEEP
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
GPKGPKGGRRRKRPKAEPAPTAQRNFTDPDSRIMKGSDKQFIQGYNAQAVVDADTQIVVA
CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCHHHHCCCCCCEEEECCCCEEEE
AAVTNQAADAPHLIPMMEQVETNVDEMPEEVSADAGYFSEQNVQWLLQRRINPYIPPEKQ
EHHHCCCCCCCHHHHHHHHHHCCHHHCHHHHCCCCCCCCCHHHHHHHHHHCCCCCCCHHH
RHSERRRAKSPRGPIPKGATLRDRMRRKLQLKRHAERYRKREQSIEPVFGQIKEARGFRQ
HHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHH
FHLRGLEAVNGEWLLVCLCHNLLKLYAFRQAG
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA