Click here to switch to the map view.

The map label for this gene is capA [H]

Identifier: 51893800

GI number: 51893800

Start: 2853428

End: 2854594

Strand: Reverse

Name: capA [H]

Synonym: STH2662

Alternate gene names: 51893800

Gene position: 2854594-2853428 (Counterclockwise)

Preceding gene: 51893802

Following gene: 51893799

Centisome position: 80.05

GC content: 72.41

Gene sequence:

>1167_bases
GTGGGCTGCACTGCGCTGTCGGCCGGCCCGTCGGACGCCGAGCCCGGTCCCGGGGCACCGCCTGCGGGCGGTCCGGGCGC
GGGACCGCAGAACGGCGGCACGGACCCGGGGCTGCAGAACGGCGGCGCGCAGGATGGCGGGCAGGGGGCCGGGAACGGCG
CCGGCGATCACCCCGGGAGCGGCTCTGCAGGCGGTCCCGACGATGCGTCGGGCAGCAGCCCCGGCAGCGGCGCGGGAACC
GGCGGGGGGGACGGCACCGTAACCATCACCTTCGTCGGCGACATCATGCTGGACCGCCTGCCGGGTGATTACCTGGCCCG
GGGGGAGGACCCGTTCGCCGGCGTGGCGGACGCCCTGACCGGCGCGGACCTCACCGTCGGAAACCTGGAGTGCGTCGTGT
CCACGGTCGGCGAGCCGGTCCCCAAGTGGTTCAACTTCCGGTGCCATCCCCGGGTGGTCCCGGTGCTGGCGCGGTACTTC
GACGCCGTCTCGGTGGCCAACAACCACTCCGGCGATTACGGCAAGGAGGCCTTCGCCGAGCAGCTGCGGCTGCTCACCGA
GGGCGGGGTGCCCTACTTCGGCGGCGGCATGAACGACGAGGAGGCCCACCGGCCGCTGATCCTGGAGCGGAACGGGCTCC
GAATCGCCCTCCTCGGCTACAACAACGTCGAGCTGCGCAGCTACGCGGCGGGGCCGGACACGCCCGGGCTGGCCTGGATC
GAACTGGACCGGCTCGCCGCGGACGTGCGGGCGGCGCGGGCCGAGGCGGACATCGTGGTGGTCTACCCGCACTGGGGCTA
CGACTACATGTTCTGGCACGCCGAGGACCAGGCCGAGATCGCCCGGGTGGCCATCGACAACGGCGCGGACCTGGTGGTGG
GCAACCACCCCCACGTGACGCAGCCGGTGGAGATCTACAAGGATCGGCTGATCGCCTACAGCCTCGGCAACTTCGTCTTC
GACGACTTCGTGGACGTGGGCCCGGACCTGGACGAGCCGTCCCGCACCAGCTGGGTCCTGACGGTGACGATCGGCAAGGA
CGGGATCCGACGCTGGGAGACCCGGGTGGCCCGCACCGACGACCGGGGCTTCCCCCAGTGGCTGGAAGGCGTCGCGTCGC
CCTGCAGCGACGGTGCGCCGGAGGACGGCTACATGTGCTACCCTTAG

Upstream 100 bases:

>100_bases
CAGAGCGCGTTGTATCGCATATACGCTATTCATATATTTGAAATAAGGAGTTATGGCAGTGAAGCGCTTTCTGCTCATCC
CCCTGCTGATCGTCGCGCTG

Downstream 100 bases:

>100_bases
TGCATGCACGGGAAGAGTGACGGGCTGCAGTCGCCTTTGCGGCGGCTGCAGCCCGTTGCGTACGACGGGGTAGACTAGCC
TCCGGATCAAGGAGGCGATT

Product: putative poly-gamma-glutamate biosynthesis enzyme

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MGCTALSAGPSDAEPGPGAPPAGGPGAGPQNGGTDPGLQNGGAQDGGQGAGNGAGDHPGSGSAGGPDDASGSSPGSGAGT
GGGDGTVTITFVGDIMLDRLPGDYLARGEDPFAGVADALTGADLTVGNLECVVSTVGEPVPKWFNFRCHPRVVPVLARYF
DAVSVANNHSGDYGKEAFAEQLRLLTEGGVPYFGGGMNDEEAHRPLILERNGLRIALLGYNNVELRSYAAGPDTPGLAWI
ELDRLAADVRAARAEADIVVVYPHWGYDYMFWHAEDQAEIARVAIDNGADLVVGNHPHVTQPVEIYKDRLIAYSLGNFVF
DDFVDVGPDLDEPSRTSWVLTVTIGKDGIRRWETRVARTDDRGFPQWLEGVASPCSDGAPEDGYMCYP

Sequences:

>Translated_388_residues
MGCTALSAGPSDAEPGPGAPPAGGPGAGPQNGGTDPGLQNGGAQDGGQGAGNGAGDHPGSGSAGGPDDASGSSPGSGAGT
GGGDGTVTITFVGDIMLDRLPGDYLARGEDPFAGVADALTGADLTVGNLECVVSTVGEPVPKWFNFRCHPRVVPVLARYF
DAVSVANNHSGDYGKEAFAEQLRLLTEGGVPYFGGGMNDEEAHRPLILERNGLRIALLGYNNVELRSYAAGPDTPGLAWI
ELDRLAADVRAARAEADIVVVYPHWGYDYMFWHAEDQAEIARVAIDNGADLVVGNHPHVTQPVEIYKDRLIAYSLGNFVF
DDFVDVGPDLDEPSRTSWVLTVTIGKDGIRRWETRVARTDDRGFPQWLEGVASPCSDGAPEDGYMCYP
>Mature_387_residues
GCTALSAGPSDAEPGPGAPPAGGPGAGPQNGGTDPGLQNGGAQDGGQGAGNGAGDHPGSGSAGGPDDASGSSPGSGAGTG
GGDGTVTITFVGDIMLDRLPGDYLARGEDPFAGVADALTGADLTVGNLECVVSTVGEPVPKWFNFRCHPRVVPVLARYFD
AVSVANNHSGDYGKEAFAEQLRLLTEGGVPYFGGGMNDEEAHRPLILERNGLRIALLGYNNVELRSYAAGPDTPGLAWIE
LDRLAADVRAARAEADIVVVYPHWGYDYMFWHAEDQAEIARVAIDNGADLVVGNHPHVTQPVEIYKDRLIAYSLGNFVFD
DFVDVGPDLDEPSRTSWVLTVTIGKDGIRRWETRVARTDDRGFPQWLEGVASPCSDGAPEDGYMCYP

Specific function: Seems to be required for maximum PGA (gamma-polyglutamic acid) production [H]

COG id: COG2843

COG function: function code M; Putative enzyme of poly-gamma-glutamate biosynthesis (capsule formation)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CapA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019079 [H]

Pfam domain/function: PF09587 PGA_cap [H]

EC number: NA

Molecular weight: Translated: 40511; Mature: 40380

Theoretical pI: Translated: 4.16; Mature: 4.16

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGCTALSAGPSDAEPGPGAPPAGGPGAGPQNGGTDPGLQNGGAQDGGQGAGNGAGDHPGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSAGGPDDASGSSPGSGAGTGGGDGTVTITFVGDIMLDRLPGDYLARGEDPFAGVADALT
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHCCCHHHHCCCCCCHHHHHHHC
GADLTVGNLECVVSTVGEPVPKWFNFRCHPRVVPVLARYFDAVSVANNHSGDYGKEAFAE
CCCEEECCHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
QLRLLTEGGVPYFGGGMNDEEAHRPLILERNGLRIALLGYNNVELRSYAAGPDTPGLAWI
HHHHHHCCCCCCCCCCCCHHHHCCCEEEECCCCEEEEEECCCEEEEEEECCCCCCCEEEE
ELDRLAADVRAARAEADIVVVYPHWGYDYMFWHAEDQAEIARVAIDNGADLVVGNHPHVT
EHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCHHEEEEEEECCCCEEEECCCCCCC
QPVEIYKDRLIAYSLGNFVFDDFVDVGPDLDEPSRTSWVLTVTIGKDGIRRWETRVARTD
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCC
DRGFPQWLEGVASPCSDGAPEDGYMCYP
CCCCHHHHHHHCCCCCCCCCCCCEEECC
>Mature Secondary Structure 
GCTALSAGPSDAEPGPGAPPAGGPGAGPQNGGTDPGLQNGGAQDGGQGAGNGAGDHPGS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GSAGGPDDASGSSPGSGAGTGGGDGTVTITFVGDIMLDRLPGDYLARGEDPFAGVADALT
CCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEEECHHHHHCCCHHHHCCCCCCHHHHHHHC
GADLTVGNLECVVSTVGEPVPKWFNFRCHPRVVPVLARYFDAVSVANNHSGDYGKEAFAE
CCCEEECCHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHH
QLRLLTEGGVPYFGGGMNDEEAHRPLILERNGLRIALLGYNNVELRSYAAGPDTPGLAWI
HHHHHHCCCCCCCCCCCCHHHHCCCEEEECCCCEEEEEECCCEEEEEEECCCCCCCEEEE
ELDRLAADVRAARAEADIVVVYPHWGYDYMFWHAEDQAEIARVAIDNGADLVVGNHPHVT
EHHHHHHHHHHHHCCCCEEEEECCCCCEEEEEECCCHHEEEEEEECCCCEEEECCCCCCC
QPVEIYKDRLIAYSLGNFVFDDFVDVGPDLDEPSRTSWVLTVTIGKDGIRRWETRVARTD
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEEECCHHHHHHHHHHHCCC
DRGFPQWLEGVASPCSDGAPEDGYMCYP
CCCCHHHHHHHCCCCCCCCCCCCEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9353933; 10486244; 11751809; 9384377 [H]