| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893795
Identifier: 51893795
GI number: 51893795
Start: 2850545
End: 2850910
Strand: Reverse
Name: 51893795
Synonym: STH2657
Alternate gene names: NA
Gene position: 2850910-2850545 (Counterclockwise)
Preceding gene: 51893797
Following gene: 51893794
Centisome position: 79.94
GC content: 73.5
Gene sequence:
>366_bases ATGCCGCCGTCCACCACCAGCTGCTGGCCGGTGATGAACCCGGACTGGTCCGGGTCCGCCAGGAAGAGCGCCGCCGCGGC GATGTCCTCCGGCCGCCCGACCCGGCCCACCGGGTGCTGGGCGTGGTCCTCCGGCCGGAGTTCCTCGCCGGTGACGTCAA TCCACCCCGGCAGGATGGCGTTCACCCGCACCGCGGGGCCCAGCGTCATGGCCAGGGCGTGGGTCAGGGCGAGGATGCCG CCCTTGCTGGCGGAGTACGCCTCGGTGTTGGGCTCGGACTGCAGCGCCCGGGTGGAGGCGATGTTGATGATCGCCGCCTG GCCCGCGGCCCGCAGCAGCGGCGCAGCGAACCGGGACATGAGGTAG
Upstream 100 bases:
>100_bases TTTCCGCGGCCGGGGCCGACCTCCTCTCCTCGGCGTCCCCCTGCCGGCGAGGTCCACCGGTTCCGCCGCGCACTACTCCA CGTAGATCATCTTGCGCGTC
Downstream 100 bases:
>100_bases GTTCCCCGCAGGTTGACCGCGATGACCCGGTCGAAGAGGGCCACCGGGGTGGACTCCAGGTCGCCGAACTGGGAGATGCC GGCGTTGTTCACCAGCACGT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 121; Mature: 120
Protein sequence:
>121_residues MPPSTTSCWPVMNPDWSGSARKSAAAAMSSGRPTRPTGCWAWSSGRSSSPVTSIHPGRMAFTRTAGPSVMARAWVRARMP PLLAEYASVLGSDCSARVEAMLMIAAWPAARSSGAANRDMR
Sequences:
>Translated_121_residues MPPSTTSCWPVMNPDWSGSARKSAAAAMSSGRPTRPTGCWAWSSGRSSSPVTSIHPGRMAFTRTAGPSVMARAWVRARMP PLLAEYASVLGSDCSARVEAMLMIAAWPAARSSGAANRDMR >Mature_120_residues PPSTTSCWPVMNPDWSGSARKSAAAAMSSGRPTRPTGCWAWSSGRSSSPVTSIHPGRMAFTRTAGPSVMARAWVRARMPP LLAEYASVLGSDCSARVEAMLMIAAWPAARSSGAANRDMR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12814; Mature: 12683
Theoretical pI: Translated: 11.99; Mature: 11.99
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.5 %Cys (Translated Protein) 7.4 %Met (Translated Protein) 9.9 %Cys+Met (Translated Protein) 2.5 %Cys (Mature Protein) 6.7 %Met (Mature Protein) 9.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSTTSCWPVMNPDWSGSARKSAAAAMSSGRPTRPTGCWAWSSGRSSSPVTSIHPGRMA CCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEECCCCEE FTRTAGPSVMARAWVRARMPPLLAEYASVLGSDCSARVEAMLMIAAWPAARSSGAANRDM EECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC R C >Mature Secondary Structure PPSTTSCWPVMNPDWSGSARKSAAAAMSSGRPTRPTGCWAWSSGRSSSPVTSIHPGRMA CCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCCEECCCCEE FTRTAGPSVMARAWVRARMPPLLAEYASVLGSDCSARVEAMLMIAAWPAARSSGAANRDM EECCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCCCCC R C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA