| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is 51893783
Identifier: 51893783
GI number: 51893783
Start: 2838343
End: 2839227
Strand: Reverse
Name: 51893783
Synonym: STH2645
Alternate gene names: NA
Gene position: 2839227-2838343 (Counterclockwise)
Preceding gene: 51893784
Following gene: 51893782
Centisome position: 79.62
GC content: 69.83
Gene sequence:
>885_bases ATGATCGCAATGATGAACGAGACGTTCTACCCACCCCGCCCCGCACGCTCCCAGGGCCTGAAAGGAATCAGCTTCGTCAC GCTGGCCGGGCTGACGCTGGCCGTCCTCGCCCTCGCCAGCAGCATGCTTTCGGCCCTGAATATGCGGTACGAGGTCACGC CCGAGGCGCTGCGCATCCGCAGCGGCTTCAGCACGCGGGAGATCCCGCTGGACGAAGTGACGGGCGTCTGGCGGCCGGAG GCGCTGACCGGGGGCGTGCGCAAGTTCGGCACGTCCGTGCCCAACCTGCGCACGGGCCGCTGGCGCTTCAACGAGACCGG GGACATCACGCTCTACGCAACCCGGCTGGAAACGCTGGTGGTCGTGGACACCGCGGACGGCCGCTACGGCGTGACCCCGG AGAACCCCGACGCGTTCACGGACGCGCTGAGGTCGCGGCTGCCCGCCGGCTTCTCCCCCGCGGGCGGCTCGGGAACGGCC GCGGCCTCCATGCTCATTCCGCTTCTCCTGGTCGCTGTGGCCGTTCCGACGACGCTGTACGCCGTGGGCCTGCCGAGCCG CTTCCCGCAGACGCTGCGGTACGAGCTGGGGCCAGACGGGCTGACCATCCGCACCGGCTTCCGACCGGTGCAGGTGCGCT ATGCCGACGTGGAGCGGGTGGAGGTGGCCTCGCCCAAGGGCTATCCGATCCGCATCTACGGTACCGCCGTGGGGAGCCTG CTGTGGGGCAAGTTCCGCTGGCCGGACGCCGGGCCCAATCTCTACCTTTACTGCACCCGGATGAAGCCGCTGGTCCTGCT CCGGCTGCGGGACGACCGGACGATCGGCATCACGCCGGAGGAGGACGAGCGGTTCGTGGCGGAGCTCAGGAAGCGGATGG GCTGA
Upstream 100 bases:
>100_bases GCTTCCGCGACGCGTACGTGGAGCGGTACCTCTTCCAGCGCATCGGTCCGCTGGTTCCCGAGGCGGCCACCGGCCGCGGT TAAATCTACGCACAGGCAGG
Downstream 100 bases:
>100_bases GGGCGGCAGGTGGAAGCAGAGCGTACGCTGTGAGGGAGTGAGAACAAGTGCAGGGACGGGTCGAGCTGCTGGGGCGGATG CGCGAGTTCGCCTGGAACCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 294; Mature: 294
Protein sequence:
>294_residues MIAMMNETFYPPRPARSQGLKGISFVTLAGLTLAVLALASSMLSALNMRYEVTPEALRIRSGFSTREIPLDEVTGVWRPE ALTGGVRKFGTSVPNLRTGRWRFNETGDITLYATRLETLVVVDTADGRYGVTPENPDAFTDALRSRLPAGFSPAGGSGTA AASMLIPLLLVAVAVPTTLYAVGLPSRFPQTLRYELGPDGLTIRTGFRPVQVRYADVERVEVASPKGYPIRIYGTAVGSL LWGKFRWPDAGPNLYLYCTRMKPLVLLRLRDDRTIGITPEEDERFVAELRKRMG
Sequences:
>Translated_294_residues MIAMMNETFYPPRPARSQGLKGISFVTLAGLTLAVLALASSMLSALNMRYEVTPEALRIRSGFSTREIPLDEVTGVWRPE ALTGGVRKFGTSVPNLRTGRWRFNETGDITLYATRLETLVVVDTADGRYGVTPENPDAFTDALRSRLPAGFSPAGGSGTA AASMLIPLLLVAVAVPTTLYAVGLPSRFPQTLRYELGPDGLTIRTGFRPVQVRYADVERVEVASPKGYPIRIYGTAVGSL LWGKFRWPDAGPNLYLYCTRMKPLVLLRLRDDRTIGITPEEDERFVAELRKRMG >Mature_294_residues MIAMMNETFYPPRPARSQGLKGISFVTLAGLTLAVLALASSMLSALNMRYEVTPEALRIRSGFSTREIPLDEVTGVWRPE ALTGGVRKFGTSVPNLRTGRWRFNETGDITLYATRLETLVVVDTADGRYGVTPENPDAFTDALRSRLPAGFSPAGGSGTA AASMLIPLLLVAVAVPTTLYAVGLPSRFPQTLRYELGPDGLTIRTGFRPVQVRYADVERVEVASPKGYPIRIYGTAVGSL LWGKFRWPDAGPNLYLYCTRMKPLVLLRLRDDRTIGITPEEDERFVAELRKRMG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32343; Mature: 32343
Theoretical pI: Translated: 10.03; Mature: 10.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIAMMNETFYPPRPARSQGLKGISFVTLAGLTLAVLALASSMLSALNMRYEVTPEALRIR CEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHH SGFSTREIPLDEVTGVWRPEALTGGVRKFGTSVPNLRTGRWRFNETGDITLYATRLETLV CCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEEEEEEE VVDTADGRYGVTPENPDAFTDALRSRLPAGFSPAGGSGTAAASMLIPLLLVAVAVPTTLY EEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHE AVGLPSRFPQTLRYELGPDGLTIRTGFRPVQVRYADVERVEVASPKGYPIRIYGTAVGSL EECCCCCCCHHHHHEECCCCEEEECCCEEEEEEECCCEEEEECCCCCCEEEEEHHHHHHH LWGKFRWPDAGPNLYLYCTRMKPLVLLRLRDDRTIGITPEEDERFVAELRKRMG HHCCCCCCCCCCCEEEEEECCCEEEEEEECCCCEECCCCCHHHHHHHHHHHHCC >Mature Secondary Structure MIAMMNETFYPPRPARSQGLKGISFVTLAGLTLAVLALASSMLSALNMRYEVTPEALRIR CEEECCCCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEECHHHHHHH SGFSTREIPLDEVTGVWRPEALTGGVRKFGTSVPNLRTGRWRFNETGDITLYATRLETLV CCCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCCCCCCCEEECCCCCEEEEEEEEEEEE VVDTADGRYGVTPENPDAFTDALRSRLPAGFSPAGGSGTAAASMLIPLLLVAVAVPTTLY EEECCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHE AVGLPSRFPQTLRYELGPDGLTIRTGFRPVQVRYADVERVEVASPKGYPIRIYGTAVGSL EECCCCCCCHHHHHEECCCCEEEECCCEEEEEEECCCEEEEECCCCCCEEEEEHHHHHHH LWGKFRWPDAGPNLYLYCTRMKPLVLLRLRDDRTIGITPEEDERFVAELRKRMG HHCCCCCCCCCCCEEEEEECCCEEEEEEECCCCEECCCCCHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA