Definition Symbiobacterium thermophilum IAM 14863 chromosome, complete genome.
Accession NC_006177
Length 3,566,135

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The map label for this gene is comA [H]

Identifier: 51893781

GI number: 51893781

Start: 2836852

End: 2837640

Strand: Reverse

Name: comA [H]

Synonym: STH2643

Alternate gene names: 51893781

Gene position: 2837640-2836852 (Counterclockwise)

Preceding gene: 51893782

Following gene: 51893774

Centisome position: 79.57

GC content: 71.48

Gene sequence:

>789_bases
GTGATCCGCGACCCCCTGCCGGGGCGGGCGCGCAAGCCCCGGAGCGTGGGGCTGACCATGGTCATCGACAAGGGGTTGGG
CCTCGGTCCGACCCGTGCCCTGCTGGAGCTGGCGGGGGAGTACATCGACTTCATCAAGCTGGGCTTCGGCACGGCCGCCC
TCTACCCGGAGCGGATCCTCCGGGAGAAGGTGGCCTTGATTCGCGGCTGCGGCGTGGAACCCTATCCGGGGGGGACGTTC
CTCGAGGCGGCCCTGCTCCAGGGCCGGCTGGAAGCCTTCCTGGCCGCCACGTGGGACCTGGGCTTCCGCGCGGTGGAGGT
CAGCGAGGGCACCATTGACCTCGACCACCGGGACCGGGAGCGCGCGATCCGCGCGGCCAGGAACATGGGCTTCACCGTCA
TCACCGAGGTGGGAAAGAAAGACGGTAGCCAGGAGCTTGACCCCGCGGCAGCGCTGTCCCGGATCGAGGCGGACCTGGCC
GCGGGCGCCGCGAAGGTGATCGTGGAAGGCCGCGAGTCGGGGAAGGGCGTCGGCCTCTACGACCGTGAAGGCCGCCTGAA
GCTGGGGCTCCTGGAGCGGCTGGTGGCCGGTCTGCCGGATCCCGGTGCGATCATCTGGGAGGCGCCCCTGAAGGCGCAGC
AGGAGGAGTTGATCGCGCGCTTCGGCGTCAACGTGAACCTGGGCAACGTGCCGCCGGAGGAGGTGATCGCCCTGGAGGCG
CTGCGCTGCGGCCTGCGGGGCGACACGCTGCGGTTGGCGATCGAAGGCGCGCGGCCGGCGGCCCGGTGA

Upstream 100 bases:

>100_bases
TCCGCCTCATACCCTGCAGGGGAGAATGCGCGGGCCAGTGCCTGCGCAGCCAGAGTGGAGGAGGCCGGGCGTGAGTCAGG
ACGTGCGCGCATACGCAGGC

Downstream 100 bases:

>100_bases
GCCAGGCGCCGTAGGGCGACCGGGAGCCCCGCACGGTCGATGAGGACCGCCGGCCAAGGCCGGCGGTCCTCACTCACCGT
TATGCAGCTCGCAACCGGCC

Product: putative (2R)-phospho-3-sulfolactate synthase

Products: NA

Alternate protein names: (2R)-phospho-3-sulfolactate synthase; PSL synthase [H]

Number of amino acids: Translated: 262; Mature: 262

Protein sequence:

>262_residues
MIRDPLPGRARKPRSVGLTMVIDKGLGLGPTRALLELAGEYIDFIKLGFGTAALYPERILREKVALIRGCGVEPYPGGTF
LEAALLQGRLEAFLAATWDLGFRAVEVSEGTIDLDHRDRERAIRAARNMGFTVITEVGKKDGSQELDPAAALSRIEADLA
AGAAKVIVEGRESGKGVGLYDREGRLKLGLLERLVAGLPDPGAIIWEAPLKAQQEELIARFGVNVNLGNVPPEEVIALEA
LRCGLRGDTLRLAIEGARPAAR

Sequences:

>Translated_262_residues
MIRDPLPGRARKPRSVGLTMVIDKGLGLGPTRALLELAGEYIDFIKLGFGTAALYPERILREKVALIRGCGVEPYPGGTF
LEAALLQGRLEAFLAATWDLGFRAVEVSEGTIDLDHRDRERAIRAARNMGFTVITEVGKKDGSQELDPAAALSRIEADLA
AGAAKVIVEGRESGKGVGLYDREGRLKLGLLERLVAGLPDPGAIIWEAPLKAQQEELIARFGVNVNLGNVPPEEVIALEA
LRCGLRGDTLRLAIEGARPAAR
>Mature_262_residues
MIRDPLPGRARKPRSVGLTMVIDKGLGLGPTRALLELAGEYIDFIKLGFGTAALYPERILREKVALIRGCGVEPYPGGTF
LEAALLQGRLEAFLAATWDLGFRAVEVSEGTIDLDHRDRERAIRAARNMGFTVITEVGKKDGSQELDPAAALSRIEADLA
AGAAKVIVEGRESGKGVGLYDREGRLKLGLLERLVAGLPDPGAIIWEAPLKAQQEELIARFGVNVNLGNVPPEEVIALEA
LRCGLRGDTLRLAIEGARPAAR

Specific function: Catalyzes the addition of sulfite to phosphoenolpyruvate (PEP) to yield (2R)-phospho-3-sulfolactate (PSL) [H]

COG id: COG1809

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the phosphosulfolactate synthase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013785
- InterPro:   IPR022370
- InterPro:   IPR003830 [H]

Pfam domain/function: PF02679 ComA [H]

EC number: =4.4.1.19 [H]

Molecular weight: Translated: 28135; Mature: 28135

Theoretical pI: Translated: 6.12; Mature: 6.12

Prosite motif: PS00678 WD_REPEATS_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIRDPLPGRARKPRSVGLTMVIDKGLGLGPTRALLELAGEYIDFIKLGFGTAALYPERIL
CCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
REKVALIRGCGVEPYPGGTFLEAALLQGRLEAFLAATWDLGFRAVEVSEGTIDLDHRDRE
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCHHH
RAIRAARNMGFTVITEVGKKDGSQELDPAAALSRIEADLAAGAAKVIVEGRESGKGVGLY
HHHHHHHHCCCCEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEE
DREGRLKLGLLERLVAGLPDPGAIIWEAPLKAQQEELIARFGVNVNLGNVPPEEVIALEA
CCCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCEECCCCCHHHHHHHHH
LRCGLRGDTLRLAIEGARPAAR
HHCCCCCCEEEEEEECCCCCCC
>Mature Secondary Structure
MIRDPLPGRARKPRSVGLTMVIDKGLGLGPTRALLELAGEYIDFIKLGFGTAALYPERIL
CCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
REKVALIRGCGVEPYPGGTFLEAALLQGRLEAFLAATWDLGFRAVEVSEGTIDLDHRDRE
HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCHHH
RAIRAARNMGFTVITEVGKKDGSQELDPAAALSRIEADLAAGAAKVIVEGRESGKGVGLY
HHHHHHHHCCCCEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEE
DREGRLKLGLLERLVAGLPDPGAIIWEAPLKAQQEELIARFGVNVNLGNVPPEEVIALEA
CCCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCEECCCCCHHHHHHHHH
LRCGLRGDTLRLAIEGARPAAR
HHCCCCCCEEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9371463 [H]