| Definition | Symbiobacterium thermophilum IAM 14863 chromosome, complete genome. |
|---|---|
| Accession | NC_006177 |
| Length | 3,566,135 |
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The map label for this gene is comA [H]
Identifier: 51893781
GI number: 51893781
Start: 2836852
End: 2837640
Strand: Reverse
Name: comA [H]
Synonym: STH2643
Alternate gene names: 51893781
Gene position: 2837640-2836852 (Counterclockwise)
Preceding gene: 51893782
Following gene: 51893774
Centisome position: 79.57
GC content: 71.48
Gene sequence:
>789_bases GTGATCCGCGACCCCCTGCCGGGGCGGGCGCGCAAGCCCCGGAGCGTGGGGCTGACCATGGTCATCGACAAGGGGTTGGG CCTCGGTCCGACCCGTGCCCTGCTGGAGCTGGCGGGGGAGTACATCGACTTCATCAAGCTGGGCTTCGGCACGGCCGCCC TCTACCCGGAGCGGATCCTCCGGGAGAAGGTGGCCTTGATTCGCGGCTGCGGCGTGGAACCCTATCCGGGGGGGACGTTC CTCGAGGCGGCCCTGCTCCAGGGCCGGCTGGAAGCCTTCCTGGCCGCCACGTGGGACCTGGGCTTCCGCGCGGTGGAGGT CAGCGAGGGCACCATTGACCTCGACCACCGGGACCGGGAGCGCGCGATCCGCGCGGCCAGGAACATGGGCTTCACCGTCA TCACCGAGGTGGGAAAGAAAGACGGTAGCCAGGAGCTTGACCCCGCGGCAGCGCTGTCCCGGATCGAGGCGGACCTGGCC GCGGGCGCCGCGAAGGTGATCGTGGAAGGCCGCGAGTCGGGGAAGGGCGTCGGCCTCTACGACCGTGAAGGCCGCCTGAA GCTGGGGCTCCTGGAGCGGCTGGTGGCCGGTCTGCCGGATCCCGGTGCGATCATCTGGGAGGCGCCCCTGAAGGCGCAGC AGGAGGAGTTGATCGCGCGCTTCGGCGTCAACGTGAACCTGGGCAACGTGCCGCCGGAGGAGGTGATCGCCCTGGAGGCG CTGCGCTGCGGCCTGCGGGGCGACACGCTGCGGTTGGCGATCGAAGGCGCGCGGCCGGCGGCCCGGTGA
Upstream 100 bases:
>100_bases TCCGCCTCATACCCTGCAGGGGAGAATGCGCGGGCCAGTGCCTGCGCAGCCAGAGTGGAGGAGGCCGGGCGTGAGTCAGG ACGTGCGCGCATACGCAGGC
Downstream 100 bases:
>100_bases GCCAGGCGCCGTAGGGCGACCGGGAGCCCCGCACGGTCGATGAGGACCGCCGGCCAAGGCCGGCGGTCCTCACTCACCGT TATGCAGCTCGCAACCGGCC
Product: putative (2R)-phospho-3-sulfolactate synthase
Products: NA
Alternate protein names: (2R)-phospho-3-sulfolactate synthase; PSL synthase [H]
Number of amino acids: Translated: 262; Mature: 262
Protein sequence:
>262_residues MIRDPLPGRARKPRSVGLTMVIDKGLGLGPTRALLELAGEYIDFIKLGFGTAALYPERILREKVALIRGCGVEPYPGGTF LEAALLQGRLEAFLAATWDLGFRAVEVSEGTIDLDHRDRERAIRAARNMGFTVITEVGKKDGSQELDPAAALSRIEADLA AGAAKVIVEGRESGKGVGLYDREGRLKLGLLERLVAGLPDPGAIIWEAPLKAQQEELIARFGVNVNLGNVPPEEVIALEA LRCGLRGDTLRLAIEGARPAAR
Sequences:
>Translated_262_residues MIRDPLPGRARKPRSVGLTMVIDKGLGLGPTRALLELAGEYIDFIKLGFGTAALYPERILREKVALIRGCGVEPYPGGTF LEAALLQGRLEAFLAATWDLGFRAVEVSEGTIDLDHRDRERAIRAARNMGFTVITEVGKKDGSQELDPAAALSRIEADLA AGAAKVIVEGRESGKGVGLYDREGRLKLGLLERLVAGLPDPGAIIWEAPLKAQQEELIARFGVNVNLGNVPPEEVIALEA LRCGLRGDTLRLAIEGARPAAR >Mature_262_residues MIRDPLPGRARKPRSVGLTMVIDKGLGLGPTRALLELAGEYIDFIKLGFGTAALYPERILREKVALIRGCGVEPYPGGTF LEAALLQGRLEAFLAATWDLGFRAVEVSEGTIDLDHRDRERAIRAARNMGFTVITEVGKKDGSQELDPAAALSRIEADLA AGAAKVIVEGRESGKGVGLYDREGRLKLGLLERLVAGLPDPGAIIWEAPLKAQQEELIARFGVNVNLGNVPPEEVIALEA LRCGLRGDTLRLAIEGARPAAR
Specific function: Catalyzes the addition of sulfite to phosphoenolpyruvate (PEP) to yield (2R)-phospho-3-sulfolactate (PSL) [H]
COG id: COG1809
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the phosphosulfolactate synthase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022370 - InterPro: IPR003830 [H]
Pfam domain/function: PF02679 ComA [H]
EC number: =4.4.1.19 [H]
Molecular weight: Translated: 28135; Mature: 28135
Theoretical pI: Translated: 6.12; Mature: 6.12
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRDPLPGRARKPRSVGLTMVIDKGLGLGPTRALLELAGEYIDFIKLGFGTAALYPERIL CCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH REKVALIRGCGVEPYPGGTFLEAALLQGRLEAFLAATWDLGFRAVEVSEGTIDLDHRDRE HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCHHH RAIRAARNMGFTVITEVGKKDGSQELDPAAALSRIEADLAAGAAKVIVEGRESGKGVGLY HHHHHHHHCCCCEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEE DREGRLKLGLLERLVAGLPDPGAIIWEAPLKAQQEELIARFGVNVNLGNVPPEEVIALEA CCCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCEECCCCCHHHHHHHHH LRCGLRGDTLRLAIEGARPAAR HHCCCCCCEEEEEEECCCCCCC >Mature Secondary Structure MIRDPLPGRARKPRSVGLTMVIDKGLGLGPTRALLELAGEYIDFIKLGFGTAALYPERIL CCCCCCCCCCCCCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH REKVALIRGCGVEPYPGGTFLEAALLQGRLEAFLAATWDLGFRAVEVSEGTIDLDHRDRE HHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCEEECCCCHHH RAIRAARNMGFTVITEVGKKDGSQELDPAAALSRIEADLAAGAAKVIVEGRESGKGVGLY HHHHHHHHCCCCEEEHHHCCCCCCCCCHHHHHHHHHHHHHCCCEEEEEECCCCCCCCCEE DREGRLKLGLLERLVAGLPDPGAIIWEAPLKAQQEELIARFGVNVNLGNVPPEEVIALEA CCCCCCHHHHHHHHHHCCCCCCCEEECCCCHHHHHHHHHHHCCCEECCCCCHHHHHHHHH LRCGLRGDTLRLAIEGARPAAR HHCCCCCCEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9371463 [H]