Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is mreC [H]
Identifier: 51598968
GI number: 51598968
Start: 755125
End: 755970
Strand: Direct
Name: mreC [H]
Synonym: BG0738
Alternate gene names: 51598968
Gene position: 755125-755970 (Clockwise)
Preceding gene: 51598967
Following gene: 51598969
Centisome position: 83.51
GC content: 27.54
Gene sequence:
>846_bases ATGAATTTTCTTGTCAAATTCAAGAATTTTATCAAAGTGCTTTTAGTATTGATAGTTTCTCTTGTTTTTATGATTTATGA TTCAAGCAGTGTTCAAAGGAGAAGGCCTGATAATTTTTTGTTTTTTACTTTTAGTTCTTATATTCAAAGTAGAATGCATG GGGCTTTTAGTTTTATTTCCAATGTTTTTAAAACTGTAAATGAATACAAAAATTATAAGGACAAGATAGAATTTTATAAA AAAAGGATACAACAGCTTGAAATAGTAACTCAAAATATACAGTCACTAAGGCAAGAGAATATTCGCCTTAAGGAGCAATT AAATTTTTATTCGTCAAGTTCTAGCGATTTTATTTCAGCAGAGATTATATATCTAAATTATTCAAATATATCGACTTTAA TGGCTATTAATAAAGGATTCAATGATGGAATAGAAAAGGATATGATAGCAGTTGCATATCAAGATGGATTTAGTGGACTT GTAGGTAAAGTTGTAAAAGTTTATTCTAATACTGCTAAAATTTTGCCTTTAACTAATTATGAAAATTTTGTTTCGGCAAG GATTCAAAGCAGTAGGTTTATAGGCCTTATTGAAGGAAATGGTTATGGCAAAAAACTTGAAATGAATTATGTTAATAGGC TTGCTGAAAAAGATTTGAAAATAGGTGATTCTATTGTTACTGCTGGGTTTAGTGAATATCCTGTTGGTATTTATATTGGA AAGATTACCAATTTTCATATTCTTGATTACAATTCTCTTTTAAAAATAGAAGTAGAACCGGCAATAGTTTTAGATAAACT TGAGTATGTTTTTCTTGTTAAAAACAACAAAGAGATTAGTGAATAA
Upstream 100 bases:
>100_bases TCCGCTTCTCTCTGTAGCTGTTGGTGCGGGATTATTTTATGATTATGCTAACAGAATAGATATCAGTAAGAATATTTACA GTTTTATCAATGAATAAGTT
Downstream 100 bases:
>100_bases TGGTAGCATTTTTTACATATTTTATTTCTAGTGCATTTTTAGGTAAAATTTTTCAATATTATTTTGCAACTTATTTTTAT TTTTCAATAGATATTTTTTT
Product: rod shape-determining protein MreC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 281; Mature: 281
Protein sequence:
>281_residues MNFLVKFKNFIKVLLVLIVSLVFMIYDSSSVQRRRPDNFLFFTFSSYIQSRMHGAFSFISNVFKTVNEYKNYKDKIEFYK KRIQQLEIVTQNIQSLRQENIRLKEQLNFYSSSSSDFISAEIIYLNYSNISTLMAINKGFNDGIEKDMIAVAYQDGFSGL VGKVVKVYSNTAKILPLTNYENFVSARIQSSRFIGLIEGNGYGKKLEMNYVNRLAEKDLKIGDSIVTAGFSEYPVGIYIG KITNFHILDYNSLLKIEVEPAIVLDKLEYVFLVKNNKEISE
Sequences:
>Translated_281_residues MNFLVKFKNFIKVLLVLIVSLVFMIYDSSSVQRRRPDNFLFFTFSSYIQSRMHGAFSFISNVFKTVNEYKNYKDKIEFYK KRIQQLEIVTQNIQSLRQENIRLKEQLNFYSSSSSDFISAEIIYLNYSNISTLMAINKGFNDGIEKDMIAVAYQDGFSGL VGKVVKVYSNTAKILPLTNYENFVSARIQSSRFIGLIEGNGYGKKLEMNYVNRLAEKDLKIGDSIVTAGFSEYPVGIYIG KITNFHILDYNSLLKIEVEPAIVLDKLEYVFLVKNNKEISE >Mature_281_residues MNFLVKFKNFIKVLLVLIVSLVFMIYDSSSVQRRRPDNFLFFTFSSYIQSRMHGAFSFISNVFKTVNEYKNYKDKIEFYK KRIQQLEIVTQNIQSLRQENIRLKEQLNFYSSSSSDFISAEIIYLNYSNISTLMAINKGFNDGIEKDMIAVAYQDGFSGL VGKVVKVYSNTAKILPLTNYENFVSARIQSSRFIGLIEGNGYGKKLEMNYVNRLAEKDLKIGDSIVTAGFSEYPVGIYIG KITNFHILDYNSLLKIEVEPAIVLDKLEYVFLVKNNKEISE
Specific function: Involved in formation of the rod shape of the cell. May also contribute to regulation of formation of penicillin-binding proteins [H]
COG id: COG1792
COG function: function code M; Cell shape-determining protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the mreC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR007221 - InterPro: IPR005223 [H]
Pfam domain/function: PF04085 MreC [H]
EC number: NA
Molecular weight: Translated: 32412; Mature: 32412
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.1 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFLVKFKNFIKVLLVLIVSLVFMIYDSSSVQRRRPDNFLFFTFSSYIQSRMHGAFSFIS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHH NVFKTVNEYKNYKDKIEFYKKRIQQLEIVTQNIQSLRQENIRLKEQLNFYSSSSSDFISA HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEE EIIYLNYSNISTLMAINKGFNDGIEKDMIAVAYQDGFSGLVGKVVKVYSNTAKILPLTNY EEEEEECCCCCEEHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC ENFVSARIQSSRFIGLIEGNGYGKKLEMNYVNRLAEKDLKIGDSIVTAGFSEYPVGIYIG HHHHHHHCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEE KITNFHILDYNSLLKIEVEPAIVLDKLEYVFLVKNNKEISE CEEEEEEEECCCEEEEEECCCEEEECEEEEEEEECCCCCCC >Mature Secondary Structure MNFLVKFKNFIKVLLVLIVSLVFMIYDSSSVQRRRPDNFLFFTFSSYIQSRMHGAFSFIS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCEEEEEHHHHHHHHHHHHHHHHH NVFKTVNEYKNYKDKIEFYKKRIQQLEIVTQNIQSLRQENIRLKEQLNFYSSSSSDFISA HHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCCCCCEEEE EIIYLNYSNISTLMAINKGFNDGIEKDMIAVAYQDGFSGLVGKVVKVYSNTAKILPLTNY EEEEEECCCCCEEHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHCCCEEEEEECCC ENFVSARIQSSRFIGLIEGNGYGKKLEMNYVNRLAEKDLKIGDSIVTAGFSEYPVGIYIG HHHHHHHCCCCEEEEEEECCCCCCEEEHHHHHHHHHHHHHCCCHHHCCCCCCCCCEEEEE KITNFHILDYNSLLKIEVEPAIVLDKLEYVFLVKNNKEISE CEEEEEEEECCCEEEEEECCCEEEECEEEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1400225; 1400224; 9384377 [H]