Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is 51598966
Identifier: 51598966
GI number: 51598966
Start: 753093
End: 754061
Strand: Direct
Name: 51598966
Synonym: BG0736
Alternate gene names: NA
Gene position: 753093-754061 (Clockwise)
Preceding gene: 51598965
Following gene: 51598967
Centisome position: 83.28
GC content: 24.36
Gene sequence:
>969_bases ATGGAAATAAGATATTTAAGATATATTTTTTATTCATTTATGATTTTCATTTTTATTTTTTTAATTTATTATATTTTGTC ATATTTTAAATCTTTTTCTAATTCTTATTTGAAAGCCGGGCCAACAGAGGTTGATTTGCTTTTACTGTGGGATAAAAAAG AATATAAAGAAATAATAGATTATGCTGAAAATGATATTAAAAATCATAGATTTGATTTTAATTTAAATTTGCTTTTAGGA TTTTCATACTTTTATTATTCTTTAATAGTAAATGAAGGGTATTTAAAAGGAGAATTTTTAGATAAATCCATAGAAAGATT AAGATTTTTGATTTCTATAAATAATGGAGTCTCTATAGGCCCTTTGTATTATATATTAGGAAAGGCATATTCTCATAAAG GAGAGTTTTATAGTGAACTTGCTGTAAAATTTTTGAAGAAGGCTTTAAGTGTTGATAATTTTAATTTCATGAACATTAAA GAAGATATTTTTGAATATTTGGGATATTCTTATCAGCTTTTAAGAGATTACAAGTCTAGTTTAAAGTTTTTTGAAAAAGC TTATAATGAAAATAAATCTGATTTAGTGCTTTGGAGCTTGGCTTATGTTAATTATAAGCTGAATGATATAAATAAAAGTA TCGAGTATATAAAAAAAATAATAGAAGAAGAGCAAGAAAAATTGTCAAAGGGTGAGAAAACTGATGAAAATTTAATTCAA AAGGTATATTTGCTTTATGGAGACATTTTATTAGATAAGGGTGACTTTGACAATGCTTTTAATTACTATAATAAAGTTCT AGAAATTAATAGTTCAAATTCTAGCGTTTATGTTAAAATAGGAGATATATATAGGAAGAAAGATAAAGATTATCCTAAAG CTAGAAAATACTGGAGAGAAGCTCTCAATCTAAATCCTTATTTAGAATCAGCAAGAGAGAGGCTTGGAATTACTTTGGAA GACTTTTAG
Upstream 100 bases:
>100_bases GATTTTTTTAGCGATAAGAAAACAAGAGAGATGATGGCATAGTACAGAACTCGGCTTATGGGTGTCAGCTTAATTTCATA AGTCCAAAAGAGAGTTTTAA
Downstream 100 bases:
>100_bases GGAGGTTGATTTGAATTTGTTTAAGTCTTTTTTAATAGATATTGGTATTGATCTTGGTACATGTAATACGTTGGTTTATA TTAAAGATTATGGTGTGGTT
Product: hypothetical protein
Products: NA
Alternate protein names: Tetratricopeptide Repeat Family Protein; Tetratricopeptide TPR_2 Repeat Protein
Number of amino acids: Translated: 322; Mature: 322
Protein sequence:
>322_residues MEIRYLRYIFYSFMIFIFIFLIYYILSYFKSFSNSYLKAGPTEVDLLLLWDKKEYKEIIDYAENDIKNHRFDFNLNLLLG FSYFYYSLIVNEGYLKGEFLDKSIERLRFLISINNGVSIGPLYYILGKAYSHKGEFYSELAVKFLKKALSVDNFNFMNIK EDIFEYLGYSYQLLRDYKSSLKFFEKAYNENKSDLVLWSLAYVNYKLNDINKSIEYIKKIIEEEQEKLSKGEKTDENLIQ KVYLLYGDILLDKGDFDNAFNYYNKVLEINSSNSSVYVKIGDIYRKKDKDYPKARKYWREALNLNPYLESARERLGITLE DF
Sequences:
>Translated_322_residues MEIRYLRYIFYSFMIFIFIFLIYYILSYFKSFSNSYLKAGPTEVDLLLLWDKKEYKEIIDYAENDIKNHRFDFNLNLLLG FSYFYYSLIVNEGYLKGEFLDKSIERLRFLISINNGVSIGPLYYILGKAYSHKGEFYSELAVKFLKKALSVDNFNFMNIK EDIFEYLGYSYQLLRDYKSSLKFFEKAYNENKSDLVLWSLAYVNYKLNDINKSIEYIKKIIEEEQEKLSKGEKTDENLIQ KVYLLYGDILLDKGDFDNAFNYYNKVLEINSSNSSVYVKIGDIYRKKDKDYPKARKYWREALNLNPYLESARERLGITLE DF >Mature_322_residues MEIRYLRYIFYSFMIFIFIFLIYYILSYFKSFSNSYLKAGPTEVDLLLLWDKKEYKEIIDYAENDIKNHRFDFNLNLLLG FSYFYYSLIVNEGYLKGEFLDKSIERLRFLISINNGVSIGPLYYILGKAYSHKGEFYSELAVKFLKKALSVDNFNFMNIK EDIFEYLGYSYQLLRDYKSSLKFFEKAYNENKSDLVLWSLAYVNYKLNDINKSIEYIKKIIEEEQEKLSKGEKTDENLIQ KVYLLYGDILLDKGDFDNAFNYYNKVLEINSSNSSVYVKIGDIYRKKDKDYPKARKYWREALNLNPYLESARERLGITLE DF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38610; Mature: 38610
Theoretical pI: Translated: 6.59; Mature: 6.59
Prosite motif: PS50005 TPR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 0.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEIRYLRYIFYSFMIFIFIFLIYYILSYFKSFSNSYLKAGPTEVDLLLLWDKKEYKEIID CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEEECCHHHHHHHH YAENDIKNHRFDFNLNLLLGFSYFYYSLIVNEGYLKGEFLDKSIERLRFLISINNGVSIG HHHHHHHCCEECEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEHEEECCCCCHH PLYYILGKAYSHKGEFYSELAVKFLKKALSVDNFNFMNIKEDIFEYLGYSYQLLRDYKSS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH LKFFEKAYNENKSDLVLWSLAYVNYKLNDINKSIEYIKKIIEEEQEKLSKGEKTDENLIQ HHHHHHHHCCCCCCEEEEEHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH KVYLLYGDILLDKGDFDNAFNYYNKVLEINSSNSSVYVKIGDIYRKKDKDYPKARKYWRE HHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCEEEEEEHHHHHHCCCCCHHHHHHHHH ALNLNPYLESARERLGITLEDF HCCCCHHHHHHHHHHCCCCCCC >Mature Secondary Structure MEIRYLRYIFYSFMIFIFIFLIYYILSYFKSFSNSYLKAGPTEVDLLLLWDKKEYKEIID CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCCEEEEEEECCHHHHHHHH YAENDIKNHRFDFNLNLLLGFSYFYYSLIVNEGYLKGEFLDKSIERLRFLISINNGVSIG HHHHHHHCCEECEEEHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHEEHEEECCCCCHH PLYYILGKAYSHKGEFYSELAVKFLKKALSVDNFNFMNIKEDIFEYLGYSYQLLRDYKSS HHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHCCHHHHHHHHHHH LKFFEKAYNENKSDLVLWSLAYVNYKLNDINKSIEYIKKIIEEEQEKLSKGEKTDENLIQ HHHHHHHHCCCCCCEEEEEHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH KVYLLYGDILLDKGDFDNAFNYYNKVLEINSSNSSVYVKIGDIYRKKDKDYPKARKYWRE HHHHHHHHHHCCCCCCCHHHHHHHHHEEEECCCCEEEEEEHHHHHHCCCCCHHHHHHHHH ALNLNPYLESARERLGITLEDF HCCCCHHHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA