Definition | Borrelia garinii PBi chromosome chromosome linear, complete sequence. |
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Accession | NC_006156 |
Length | 904,246 |
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The map label for this gene is mcp-4 [H]
Identifier: 51598935
GI number: 51598935
Start: 720747
End: 723008
Strand: Direct
Name: mcp-4 [H]
Synonym: BG0703
Alternate gene names: 51598935
Gene position: 720747-723008 (Clockwise)
Preceding gene: 51598934
Following gene: 51598936
Centisome position: 79.71
GC content: 31.87
Gene sequence:
>2262_bases ATGCTTGTGAAGCTTAAATACAGGTTTGTTGGATTTTTATTATTGTTTTTAATTTTTATACTGTTGCTTTTTTCTATGAT TTTTAATTTTGTTTTATGTGGTTATTTAGAAGATTATTATAAGCAGCTTACAAGGGCGCAATTAAGAAGAGCAGCTTTTT CTACGCAATCTTTTTTAGACACTTTGTATGTTATAATCAACGGTGCAGCTTCTAATTTAGCACTTGAAACCATATCAGAA TTTGCAATTTCCGAGAATAGAGGAAAAGATTTCTCTGAGTCTGAATTGGTAGATTTAAGAAAAAATTCAAAATTTGTTAT TGATTCTGTAAAGGTGAATAAAAAATATCGACAATACTTATACAATTTTATGACTAATCTTAAAAATGATACTCTTTTTG AAGAATTCGCGTTTTTTGATTTTGAAGGGAGAATAATTGTTAGCACAAGGCATGAAAATAATATGGATTTTGGACATTCT GAGGCCAATACTAATTATTTTAAAAAAGCGATTGAGGATTATAAGCAAAACCAATTAAAATTTATAGGCTGGTATTCAAA TCTTTCTGAAGGAATATCTGCAGAAGTTGCCATTAGGTCTAGGCAAAGTGAAAAAAAGGCTTTTGCAATAATTGTGCCTG TATACTCCCCAGAAGATAAGCTTGTTTGTGGATATTTGGCTGGATATTTGCTTAATGATGTTTTAGCAGATAGTTTTGAT AGATTTAGATTTGGTTTTTATAAAAGGGGCAATTTTGTTTATATAGATTCTAATAATATAGCAGTTAATCCTTTTGAAGA ATACAATGAAACCAGTAGGGTTAGTTCTAAATTTTTAAATATTCTTAAAGATGTTTTTTCTAAGCCACCTCTTTTATCAA ATATTCCTACTGAAGTGTCGGTTTACACTATTGATAGGATATTATTCTCCGAAATGGGAGAAGAGTGTTATTATGCATTG TTGCCCATAAGTAGTAAATTAGGAGAGAAAGGTGGGGTGCTTATTGCTAGACTTCCTTATAAAGATATTTACGGAGTAAT ATCTAGTCTAAAATTTCAGTATATCTTGTATTCTGTTTTAGGCATTATTTCATTAAGCATTGTTCTTTTAATGAGAATAG ATAGGATTATTAGTTTTCGTTTAAACGCAATTAGAGTTTTAGTTCAAGATATGGTCAAGGGAGATTTAGACAAAGATTAT GCCCTTGATGATGGTGATGATTATTTTGATGAGCTTGGCATGTTAAGTCTTCAGGTTGTGAAAATGAAAAAAGCTATTTC TGTAGCAATTGCTAGTGTTTTGAGAAATATTAGCTATGTAAATAAGGCAAGTTTAGAAGTTGCCAGTTCTAGTCAAAATT TAACTTCTAGTGCGTTACAGCAGGCATCTGCTCTTGAAGAAATGTCAGCCAATGTTGAGCAAATAGCGTCAGGTGTTAAT ATGAGCGCTAATAATTCTTATGAAACTGAGCAAATAGCTTTAAAGACCAATGAAAATTCTCAGATAGGTGGTAAAGCTGT TGAAGAATCTGTTATTGCTATGCAAGATATTGTAGAGAAAGTTAGCGTTATTGAAGAAATAGCTAGAAAAACCAATTTAC TTGCTTTGAATGCTGCTATTGAAGCTGCAAGAGCAGGTGATGAAGGAAAGGGATTTGCTGTTGTGGCTAGTGAGATTAGA AAGTTGGCTGATCTTAGCAAAATTTCGGCTCTTGAGATTGGAGAGTTGGTTGAAGATAACTCTAAGGTAGCAACCGAAGC TGGAGTGATCTTCAAAGAAATGTTACCTGAAATAGAAGAAACAGCTAATCTTGTCAAAAAAATTTCAGAAGGTAGCTCTA AGCAGAGCGATCAAATTGCTCAATTTAAAATGGCTTTAGACCAGGTTGGAGAAGTTGTTCAGTCTTCAGCTTCAAGTAGT GAGCAACTTTCTAGCATGTCTGATAAAATGTTAGAAAAGTCTAAGGAACTCAGAAAATCTGTATTATTTTTCAAAATTAA AGATTCTAAGATTGAAAATCTGGAAGATGGTGATTATGATTTCAGGTTGATGGATTGTCCTGAAAATTCTTTTAAAGATG AAAATCAAGATTTGAAAGGAAATGAAATCTCTACTTTAAATGGCAGTAGACATAGTAATTATTCTTTAAGTATTGAAAGC GAGCCTTCTGCAAGAACTATTAATAAGCGGGTTGATCCTAAAAAAGCTATCGATATTGCTGATAAGGATTTAAATTTTGA TGATGATTTTTCAGAGTTTTAG
Upstream 100 bases:
>100_bases TTTAAGAGTTTTTAATTTTTTGCTGTAAATTTTTTTTAATACCCTTTTGGTCTTAAGTTTGTTTGATTAAATAAGTAGAT GATTTGTGAGGTAGTTTATT
Downstream 100 bases:
>100_bases AATTTTTTTTGTAAAAAGGGGTGGTTAGTATGAAGCTGAAAGCTAGGATGTTGCTACTTGTTCTTGTTCTTATAGCATTC TTTATATCAATTTTGTTTTT
Product: methyl-accepting chemotaxis protein
Products: NA
Alternate protein names: Citrate chemoreceptor protein [H]
Number of amino acids: Translated: 753; Mature: 753
Protein sequence:
>753_residues MLVKLKYRFVGFLLLFLIFILLLFSMIFNFVLCGYLEDYYKQLTRAQLRRAAFSTQSFLDTLYVIINGAASNLALETISE FAISENRGKDFSESELVDLRKNSKFVIDSVKVNKKYRQYLYNFMTNLKNDTLFEEFAFFDFEGRIIVSTRHENNMDFGHS EANTNYFKKAIEDYKQNQLKFIGWYSNLSEGISAEVAIRSRQSEKKAFAIIVPVYSPEDKLVCGYLAGYLLNDVLADSFD RFRFGFYKRGNFVYIDSNNIAVNPFEEYNETSRVSSKFLNILKDVFSKPPLLSNIPTEVSVYTIDRILFSEMGEECYYAL LPISSKLGEKGGVLIARLPYKDIYGVISSLKFQYILYSVLGIISLSIVLLMRIDRIISFRLNAIRVLVQDMVKGDLDKDY ALDDGDDYFDELGMLSLQVVKMKKAISVAIASVLRNISYVNKASLEVASSSQNLTSSALQQASALEEMSANVEQIASGVN MSANNSYETEQIALKTNENSQIGGKAVEESVIAMQDIVEKVSVIEEIARKTNLLALNAAIEAARAGDEGKGFAVVASEIR KLADLSKISALEIGELVEDNSKVATEAGVIFKEMLPEIEETANLVKKISEGSSKQSDQIAQFKMALDQVGEVVQSSASSS EQLSSMSDKMLEKSKELRKSVLFFKIKDSKIENLEDGDYDFRLMDCPENSFKDENQDLKGNEISTLNGSRHSNYSLSIES EPSARTINKRVDPKKAIDIADKDLNFDDDFSEF
Sequences:
>Translated_753_residues MLVKLKYRFVGFLLLFLIFILLLFSMIFNFVLCGYLEDYYKQLTRAQLRRAAFSTQSFLDTLYVIINGAASNLALETISE FAISENRGKDFSESELVDLRKNSKFVIDSVKVNKKYRQYLYNFMTNLKNDTLFEEFAFFDFEGRIIVSTRHENNMDFGHS EANTNYFKKAIEDYKQNQLKFIGWYSNLSEGISAEVAIRSRQSEKKAFAIIVPVYSPEDKLVCGYLAGYLLNDVLADSFD RFRFGFYKRGNFVYIDSNNIAVNPFEEYNETSRVSSKFLNILKDVFSKPPLLSNIPTEVSVYTIDRILFSEMGEECYYAL LPISSKLGEKGGVLIARLPYKDIYGVISSLKFQYILYSVLGIISLSIVLLMRIDRIISFRLNAIRVLVQDMVKGDLDKDY ALDDGDDYFDELGMLSLQVVKMKKAISVAIASVLRNISYVNKASLEVASSSQNLTSSALQQASALEEMSANVEQIASGVN MSANNSYETEQIALKTNENSQIGGKAVEESVIAMQDIVEKVSVIEEIARKTNLLALNAAIEAARAGDEGKGFAVVASEIR KLADLSKISALEIGELVEDNSKVATEAGVIFKEMLPEIEETANLVKKISEGSSKQSDQIAQFKMALDQVGEVVQSSASSS EQLSSMSDKMLEKSKELRKSVLFFKIKDSKIENLEDGDYDFRLMDCPENSFKDENQDLKGNEISTLNGSRHSNYSLSIES EPSARTINKRVDPKKAIDIADKDLNFDDDFSEF >Mature_753_residues MLVKLKYRFVGFLLLFLIFILLLFSMIFNFVLCGYLEDYYKQLTRAQLRRAAFSTQSFLDTLYVIINGAASNLALETISE FAISENRGKDFSESELVDLRKNSKFVIDSVKVNKKYRQYLYNFMTNLKNDTLFEEFAFFDFEGRIIVSTRHENNMDFGHS EANTNYFKKAIEDYKQNQLKFIGWYSNLSEGISAEVAIRSRQSEKKAFAIIVPVYSPEDKLVCGYLAGYLLNDVLADSFD RFRFGFYKRGNFVYIDSNNIAVNPFEEYNETSRVSSKFLNILKDVFSKPPLLSNIPTEVSVYTIDRILFSEMGEECYYAL LPISSKLGEKGGVLIARLPYKDIYGVISSLKFQYILYSVLGIISLSIVLLMRIDRIISFRLNAIRVLVQDMVKGDLDKDY ALDDGDDYFDELGMLSLQVVKMKKAISVAIASVLRNISYVNKASLEVASSSQNLTSSALQQASALEEMSANVEQIASGVN MSANNSYETEQIALKTNENSQIGGKAVEESVIAMQDIVEKVSVIEEIARKTNLLALNAAIEAARAGDEGKGFAVVASEIR KLADLSKISALEIGELVEDNSKVATEAGVIFKEMLPEIEETANLVKKISEGSSKQSDQIAQFKMALDQVGEVVQSSASSS EQLSSMSDKMLEKSKELRKSVLFFKIKDSKIENLEDGDYDFRLMDCPENSFKDENQDLKGNEISTLNGSRHSNYSLSIES EPSARTINKRVDPKKAIDIADKDLNFDDDFSEF
Specific function: Acts as a receptor for citrate and mediates taxis away from phenol. Also mediates an attractant response to metal-citrate complexes [H]
COG id: COG0840
COG function: function code NT; Methyl-accepting chemotaxis protein
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 methyl-accepting transducer domain [H]
Homologues:
Organism=Escherichia coli, GI1788195, Length=315, Percent_Identity=31.7460317460317, Blast_Score=142, Evalue=6e-35, Organism=Escherichia coli, GI2367378, Length=299, Percent_Identity=32.1070234113712, Blast_Score=140, Evalue=4e-34, Organism=Escherichia coli, GI1787690, Length=328, Percent_Identity=28.6585365853659, Blast_Score=137, Evalue=3e-33, Organism=Escherichia coli, GI1788194, Length=268, Percent_Identity=29.4776119402985, Blast_Score=120, Evalue=2e-28, Organism=Escherichia coli, GI1789453, Length=269, Percent_Identity=27.5092936802974, Blast_Score=103, Evalue=3e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004090 - InterPro: IPR003122 - InterPro: IPR004091 - InterPro: IPR004089 - InterPro: IPR003660 [H]
Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal; PF02203 TarH [H]
EC number: NA
Molecular weight: Translated: 84779; Mature: 84779
Theoretical pI: Translated: 4.70; Mature: 4.70
Prosite motif: PS50111 CHEMOTAXIS_TRANSDUC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLVKLKYRFVGFLLLFLIFILLLFSMIFNFVLCGYLEDYYKQLTRAQLRRAAFSTQSFLD CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLYVIINGAASNLALETISEFAISENRGKDFSESELVDLRKNSKFVIDSVKVNKKYRQYL HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHH YNFMTNLKNDTLFEEFAFFDFEGRIIVSTRHENNMDFGHSEANTNYFKKAIEDYKQNQLK HHHHHHCCCCHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCEE FIGWYSNLSEGISAEVAIRSRQSEKKAFAIIVPVYSPEDKLVCGYLAGYLLNDVLADSFD EEEEHHHHCCCCCHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH RFRFGFYKRGNFVYIDSNNIAVNPFEEYNETSRVSSKFLNILKDVFSKPPLLSNIPTEVS HHHHCEEECCCEEEEECCCEEECCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE VYTIDRILFSEMGEECYYALLPISSKLGEKGGVLIARLPYKDIYGVISSLKFQYILYSVL HHHHHHHHHHHHCHHHEEEEEECHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH GIISLSIVLLMRIDRIISFRLNAIRVLVQDMVKGDLDKDYALDDGDDYFDELGMLSLQVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH KMKKAISVAIASVLRNISYVNKASLEVASSSQNLTSSALQQASALEEMSANVEQIASGVN HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCC MSANNSYETEQIALKTNENSQIGGKAVEESVIAMQDIVEKVSVIEEIARKTNLLALNAAI CCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHH EAARAGDEGKGFAVVASEIRKLADLSKISALEIGELVEDNSKVATEAGVIFKEMLPEIEE HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH TANLVKKISEGSSKQSDQIAQFKMALDQVGEVVQSSASSSEQLSSMSDKMLEKSKELRKS HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VLFFKIKDSKIENLEDGDYDFRLMDCPENSFKDENQDLKGNEISTLNGSRHSNYSLSIES HEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECC EPSARTINKRVDPKKAIDIADKDLNFDDDFSEF CCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure MLVKLKYRFVGFLLLFLIFILLLFSMIFNFVLCGYLEDYYKQLTRAQLRRAAFSTQSFLD CEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH TLYVIINGAASNLALETISEFAISENRGKDFSESELVDLRKNSKFVIDSVKVNKKYRQYL HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCCEEEEHHHHHHHHHHHH YNFMTNLKNDTLFEEFAFFDFEGRIIVSTRHENNMDFGHSEANTNYFKKAIEDYKQNQLK HHHHHHCCCCHHHHHHHEEECCCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHCCEE FIGWYSNLSEGISAEVAIRSRQSEKKAFAIIVPVYSPEDKLVCGYLAGYLLNDVLADSFD EEEEHHHHCCCCCHHHHHHHCCCCCCEEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH RFRFGFYKRGNFVYIDSNNIAVNPFEEYNETSRVSSKFLNILKDVFSKPPLLSNIPTEVS HHHHCEEECCCEEEEECCCEEECCHHHHCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEE VYTIDRILFSEMGEECYYALLPISSKLGEKGGVLIARLPYKDIYGVISSLKFQYILYSVL HHHHHHHHHHHHCHHHEEEEEECHHHCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHH GIISLSIVLLMRIDRIISFRLNAIRVLVQDMVKGDLDKDYALDDGDDYFDELGMLSLQVV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHH KMKKAISVAIASVLRNISYVNKASLEVASSSQNLTSSALQQASALEEMSANVEQIASGVN HHHHHHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCC MSANNSYETEQIALKTNENSQIGGKAVEESVIAMQDIVEKVSVIEEIARKTNLLALNAAI CCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEHHHH EAARAGDEGKGFAVVASEIRKLADLSKISALEIGELVEDNSKVATEAGVIFKEMLPEIEE HHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH TANLVKKISEGSSKQSDQIAQFKMALDQVGEVVQSSASSSEQLSSMSDKMLEKSKELRKS HHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH VLFFKIKDSKIENLEDGDYDFRLMDCPENSFKDENQDLKGNEISTLNGSRHSNYSLSIES HEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCEEEEECC EPSARTINKRVDPKKAIDIADKDLNFDDDFSEF CCCHHHHHHCCCCHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8419927; 11677609 [H]