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The map label for this gene is rbsC-1 [H]

Identifier: 51598933

GI number: 51598933

Start: 718541

End: 719692

Strand: Direct

Name: rbsC-1 [H]

Synonym: BG0701

Alternate gene names: 51598933

Gene position: 718541-719692 (Clockwise)

Preceding gene: 51598932

Following gene: 51598934

Centisome position: 79.46

GC content: 29.95

Gene sequence:

>1152_bases
ATGACAATTAGTAAAAACATATGCAGCAAATTTATATTAAAAATTTTAAATTCTTCAGCATTTGTTAGTATTTTTGCTCT
ATTTGTTGGATTTTTAATGGTTGGGCTAGTGGTGATGGGGCTTGGTTATTCTCCTTTTAGAATGTATTTTATAATACTAG
AGATTCTATTCTCGTCCCCCAAACATTTAGGTTATGTTTTAAGTTATGCAGCTCCTTTGGTTTTTACAGGTCTTTCTATT
GGTATTTCTTTGAAAACAGGCCTTTTTAATATTGGGGTTGAAGGTCAGTTTATACTAGGATCTATTGTTGCTTTAATAGC
ATCGATTTTCCTTGATCTACCTCCAATTTTACATGTAATTACTATTTTTGTTATTGCTTTTTTAGCGTCAGGTAGTTTAG
GAATTTTAATTGGATATTTAAAAGCTAAATTCAATATTAGCGAAGTGATTTCAGGAATAATGTTTAATTGGATATTATTT
CATTTGAATAATATAATTTTGGATTTTAGTTTTATTAAAAGAGATAATAGCGATTTTTCAAAGTCCATTAAAGAAAGTGC
ATTTATTGATCTTTTAGGTTCTTGGAAGCTTTCACCAGAAGGTCTTGCTTATAGATCTTCTCATCCTTTTGTTAATGAGC
TTTTAAAAGCGCCTCTTCATTTTGGAATAATTTTGGGAATAATTTTTGCTATTTTAATATGGTTTTTGCTTAATAAGACT
ATTATTGGATTTAAAATAAATGCCATAGGGAGTAATATTGAAGCTTCAAGATGTATGGGCATTAATGTAAAAGCCGTGCT
AATCTTTTCAATGTTTCTCTCAGCAGCTGTTGCGGGCCTTGCTGGTGCTATCCAAATTATGGGTGTTAATAAAGCCATAT
TTAAGCTTTCTTATATGGAAGGAGTTGGTTTTAATGGGATAGCTGTGTCTTTGATAGGAAACAATTCGCCGATTGGTATA
ATATTTTCTAGTATTCTTTTTTCTATATTGCTTTATGGAAGTAGTAGGGTTCAAAGTTTAATGGGCCTTCCATCTTCAAT
TGTATCCTTGATGATGGGAATAATTGTTCTTGTGATTTCTGCTAGTTATTTTTTAAATAAAATCTTTTTAAAAGGTGTTA
AGAGTGTCAAACGTAATAATATTTTTAATTAG

Upstream 100 bases:

>100_bases
TGACAGAATAGCCGTAATGCATGATGGGAGGATAGTGGGTATTTTAGAGGACAATTTTGATATTGATGTTATTGGTAAAA
TGATGATGGGTTTAAGCTAA

Downstream 100 bases:

>100_bases
TGAAACTCTAATAAATTCTCAAACCTTAATTTTAGCTGGCCTTGGTGGTCTTATAAGTGAGAAAAGTGGAATTATTAATA
TTGGACTTGAAGGAATAATG

Product: ribose/galactose ABC transporter, permease protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 383; Mature: 382

Protein sequence:

>383_residues
MTISKNICSKFILKILNSSAFVSIFALFVGFLMVGLVVMGLGYSPFRMYFIILEILFSSPKHLGYVLSYAAPLVFTGLSI
GISLKTGLFNIGVEGQFILGSIVALIASIFLDLPPILHVITIFVIAFLASGSLGILIGYLKAKFNISEVISGIMFNWILF
HLNNIILDFSFIKRDNSDFSKSIKESAFIDLLGSWKLSPEGLAYRSSHPFVNELLKAPLHFGIILGIIFAILIWFLLNKT
IIGFKINAIGSNIEASRCMGINVKAVLIFSMFLSAAVAGLAGAIQIMGVNKAIFKLSYMEGVGFNGIAVSLIGNNSPIGI
IFSSILFSILLYGSSRVQSLMGLPSSIVSLMMGIIVLVISASYFLNKIFLKGVKSVKRNNIFN

Sequences:

>Translated_383_residues
MTISKNICSKFILKILNSSAFVSIFALFVGFLMVGLVVMGLGYSPFRMYFIILEILFSSPKHLGYVLSYAAPLVFTGLSI
GISLKTGLFNIGVEGQFILGSIVALIASIFLDLPPILHVITIFVIAFLASGSLGILIGYLKAKFNISEVISGIMFNWILF
HLNNIILDFSFIKRDNSDFSKSIKESAFIDLLGSWKLSPEGLAYRSSHPFVNELLKAPLHFGIILGIIFAILIWFLLNKT
IIGFKINAIGSNIEASRCMGINVKAVLIFSMFLSAAVAGLAGAIQIMGVNKAIFKLSYMEGVGFNGIAVSLIGNNSPIGI
IFSSILFSILLYGSSRVQSLMGLPSSIVSLMMGIIVLVISASYFLNKIFLKGVKSVKRNNIFN
>Mature_382_residues
TISKNICSKFILKILNSSAFVSIFALFVGFLMVGLVVMGLGYSPFRMYFIILEILFSSPKHLGYVLSYAAPLVFTGLSIG
ISLKTGLFNIGVEGQFILGSIVALIASIFLDLPPILHVITIFVIAFLASGSLGILIGYLKAKFNISEVISGIMFNWILFH
LNNIILDFSFIKRDNSDFSKSIKESAFIDLLGSWKLSPEGLAYRSSHPFVNELLKAPLHFGIILGIIFAILIWFLLNKTI
IGFKINAIGSNIEASRCMGINVKAVLIFSMFLSAAVAGLAGAIQIMGVNKAIFKLSYMEGVGFNGIAVSLIGNNSPIGII
FSSILFSILLYGSSRVQSLMGLPSSIVSLMMGIIVLVISASYFLNKIFLKGVKSVKRNNIFN

Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG4603

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the binding-protein-dependent transport system permease family. AraH/rbsC subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851
- InterPro:   IPR002229 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 41648; Mature: 41517

Theoretical pI: Translated: 10.33; Mature: 10.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTISKNICSKFILKILNSSAFVSIFALFVGFLMVGLVVMGLGYSPFRMYFIILEILFSSP
CCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
KHLGYVLSYAAPLVFTGLSIGISLKTGLFNIGVEGQFILGSIVALIASIFLDLPPILHVI
HHHHHHHHHHHHHHHHHHHHCEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
TIFVIAFLASGSLGILIGYLKAKFNISEVISGIMFNWILFHLNNIILDFSFIKRDNSDFS
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
KSIKESAFIDLLGSWKLSPEGLAYRSSHPFVNELLKAPLHFGIILGIIFAILIWFLLNKT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
IIGFKINAIGSNIEASRCMGINVKAVLIFSMFLSAAVAGLAGAIQIMGVNKAIFKLSYME
HEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHC
GVGFNGIAVSLIGNNSPIGIIFSSILFSILLYGSSRVQSLMGLPSSIVSLMMGIIVLVIS
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHH
ASYFLNKIFLKGVKSVKRNNIFN
HHHHHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
TISKNICSKFILKILNSSAFVSIFALFVGFLMVGLVVMGLGYSPFRMYFIILEILFSSP
CCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCC
KHLGYVLSYAAPLVFTGLSIGISLKTGLFNIGVEGQFILGSIVALIASIFLDLPPILHVI
HHHHHHHHHHHHHHHHHHHHCEEEECCEEECCCCCHHHHHHHHHHHHHHHHCCHHHHHHH
TIFVIAFLASGSLGILIGYLKAKFNISEVISGIMFNWILFHLNNIILDFSFIKRDNSDFS
HHHHHHHHHCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHH
KSIKESAFIDLLGSWKLSPEGLAYRSSHPFVNELLKAPLHFGIILGIIFAILIWFLLNKT
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCH
IIGFKINAIGSNIEASRCMGINVKAVLIFSMFLSAAVAGLAGAIQIMGVNKAIFKLSYME
HEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHEEECCHHHHHHHHHC
GVGFNGIAVSLIGNNSPIGIIFSSILFSILLYGSSRVQSLMGLPSSIVSLMMGIIVLVIS
CCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHCCHHHHHHHCCCHHHHHHHHHHHHHHHH
ASYFLNKIFLKGVKSVKRNNIFN
HHHHHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]